CX295035

Overview
NameCX295035
Unique NameCX295035
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC1_KLUMA (Pyruvate decarboxylase OS=Kluyveromyces marxianus GN=PDC1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.070e-23
Identity = 72/211 (34.12%), Postives = 108/211 (51.18%), Query Frame = 2
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLV 625
            D+++  +S   K +  V    D + + N   F  V MK  L+ L  ++K     Y+     + P    P  +   PL+   ++  + K L     V+ ETG S F   +   P       Q+ +GSIG++ GATLG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH     YN I++W +  L+
Sbjct:  291 DFNTGSFSYSYKTKNIVEFHSDYIKVRNA-TFPGVQMKFVLQKLLTKVKDAAKGYKPVPVPHAPRDNKPVAD-STPLKQEWVWTQVGKFLQEGDVVLTETGTSAFGINQTHFPNDTYGISQVLWGSIGFTGGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGETAQYNCIQSWKHLDLL 499          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC1_KLULA (Pyruvate decarboxylase OS=Kluyveromyces lactis GN=PDC1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.495e-22
Identity = 77/214 (35.98%), Postives = 108/214 (50.47%), Query Frame = 2
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEP---KEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLV 625
            D+++  +S   K +  V    D   I +   F  V MK    AL K L     A + Y  + VP  +P   E      PL+   ++  + + L     VI ETG S F   +   P       Q+ +GSIG++ GATLG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH     YN I+NW +  L+
Sbjct:  291 DFNTGSFSYSYKTKNIVEFHSDYTKIRSA-TFPGVQMKF---ALQKLLTKVADAAKGYKPVPVPS-EPEHNEAVADSTPLKQEWVWTQVGEFLREGDVVITETGTSAFGINQTHFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGETAQYNCIQNWQHLELL 499          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC_HANUV (Pyruvate decarboxylase OS=Hanseniaspora uvarum GN=PDC PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.871e-22
Identity = 72/208 (34.62%), Postives = 108/208 (51.92%), Query Frame = 2
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKE--PLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE----KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP---YNVIKNW 607
            D+++  +S   + +  V    D + I N  +F  V MK  L+ L  ++ +      NY  + VP G P      +  PL    L+  + + L     V+ ETG S F   + + P       Q+ +GSIG+SVGA +G   +  E    KRVI  +GDGS Q+T Q+++ ++R G K  IF++NN GYTIE  IH GP   YN+I+NW
Sbjct:  291 DFNTGSFSYSYQTKNIVEFHSDYIKIKNA-SFPGVQMKFVLEKLIAKVGAKIA---NYSPVPVPAGLPKNAPVADSTPLAQEWLWNELGEFLEEGDIVVTETGTSAFGINQTRFPTDAYGISQVLWGSIGYSVGAMVGATFAAEELDKAKRVILFVGDGSLQLTVQEIACLIRWGLKPYIFVLNNNGYTIEKLIH-GPTAQYNMIQNW 493          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC2_MAIZE (Pyruvate decarboxylase isozyme 2 (Fragment) OS=Zea mays GN=PDC2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 2
Query:  518 QKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCE 679
            Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLV+A HNGEG C+T KV  E
Sbjct:    1 QNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVEAFHNGEGACYTAKVRTE 54          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: KDC_MYCTU (Alpha-keto-acid decarboxylase OS=Mycobacterium tuberculosis GN=kdc PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21
Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 2
Query:  200 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 634
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I +WN+T L  A+
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL 504          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: KDC_MYCTA (Alpha-keto-acid decarboxylase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=kdc PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21
Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 2
Query:  200 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 634
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I +WN+T L  A+
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL 504          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: KDC_MYCBP (Alpha-keto-acid decarboxylase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=kdc PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21
Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 2
Query:  200 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 634
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I +WN+T L  A+
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL 504          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: KDC_MYCBO (Alpha-keto-acid decarboxylase OS=Mycobacterium bovis GN=kdc PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21
Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 2
Query:  200 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 634
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I +WN+T L  A+
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL 504          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: KDC_MYCPA (Alpha-keto-acid decarboxylase OS=Mycobacterium paratuberculosis GN=kdc PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19
Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 2
Query:  203 EGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 634
            E  PP    ++PL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A LG A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I  W +T + +A+
Sbjct:  357 EPLPPPPPREQPLTQKMVWDRVCTALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGTFAREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVGWKWTEVPNAL 502          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: KDC_MYCA1 (Alpha-keto-acid decarboxylase OS=Mycobacterium avium (strain 104) GN=kdc PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19
Identity = 49/146 (33.56%), Postives = 84/146 (57.53%), Query Frame = 2
Query:  203 EGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 634
            E  PP    ++PL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A LG A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I  W +T + +++
Sbjct:  357 EPLPPPPPREQPLTQKMVWDRVCTALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGTFAREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVGWKWTEVPNSL 502          
The following BLAST results are available for this feature:
BLAST of CX295035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC1_KLUMA1.070e-2334.12Pyruvate decarboxylase OS=Kluyveromyces marxianus ... [more]
PDC1_KLULA4.495e-2235.98Pyruvate decarboxylase OS=Kluyveromyces lactis GN=... [more]
PDC_HANUV5.871e-2234.62Pyruvate decarboxylase OS=Hanseniaspora uvarum GN=... [more]
PDC2_MAIZE6.491e-2183.33Pyruvate decarboxylase isozyme 2 (Fragment) OS=Zea... [more]
KDC_MYCTU6.491e-2135.57Alpha-keto-acid decarboxylase OS=Mycobacterium tub... [more]
KDC_MYCTA6.491e-2135.57Alpha-keto-acid decarboxylase OS=Mycobacterium tub... [more]
KDC_MYCBP6.491e-2135.57Alpha-keto-acid decarboxylase OS=Mycobacterium bov... [more]
KDC_MYCBO6.491e-2135.57Alpha-keto-acid decarboxylase OS=Mycobacterium bov... [more]
KDC_MYCPA1.599e-1934.25Alpha-keto-acid decarboxylase OS=Mycobacterium par... [more]
KDC_MYCA13.562e-1933.56Alpha-keto-acid decarboxylase OS=Mycobacterium avi... [more]

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Properties
Property NameValue
Genbank descriptionC05065H06SK DroRLeaf1 Citrus clementina cDNA clone C05065H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295035 ID=CX295035; Name=CX295035; organism=Citrus clementina; type=EST; length=679bp
GAGGATTTATGACTATAGCTCGGTTGGGTACTCTCTTCTTCTCAAGAAGG
AGAAGGCAGTCATTCTGCAGCCTGATCGTGTGGTGATTGCTAATGGACCG
GCATTTGGTTGTGTTTTGATGAAGGATTTCCTCAAAGCACTTTCAAAGCG
GCTCAAAAGCAACACTACTGCTTATGAGAATTACCACAGGATTTATGTTC
CTGAGGGGCAACCTCCGAAGTGTGAACCCAAAGAGCCCTTGAGAGTGAAT
GTTCTGTTCCAACATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGAT
TGCTGAGACAGGGGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTA
AGGGATGCGGGTATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCT
GTTGGTGCTACTCTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCAT
TGCTTGCATAGGTGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAA
CAATGCTGCGATGTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGT
GGTTACACCATTGAAGTTGAGATCCATGATGGACCGTACAATGTGATCAA
GAACTGGAACTACACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCA
AGTGCTGGACAACCAAGGTCTTCTGCGAG
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