CX295035

Overview
NameCX295035
Unique NameCX295035
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: KDC_MYCUA (Alpha-keto-acid decarboxylase OS=Mycobacterium ulcerans (strain Agy99) GN=kdc PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18
Identity = 51/152 (33.55%), Postives = 86/152 (56.58%), Query Frame = 2
Query:  191 IYVPEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 634
            + VP  +P    P+  EPL   +L+  + + L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A LG A + P++R +  IGDG+ Q+T Q++    R G   +I ++NN GYT+E  IH     YN I +W +T +  A+
Sbjct:  353 VAVPPAEPGPPTPRRDEPLNQEMLWNRLCEALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGIFSREGLSPVIVVVNNDGYTVERAIHGETATYNDIVSWRWTDVPGAL 504          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC_ASPFU (Pyruvate decarboxylase OS=Aspergillus fumigatus GN=pdcA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18
Identity = 60/152 (39.47%), Postives = 82/152 (53.95%), Query Frame = 2
Query:  215 PKCEPK---EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGE 646
            P  EPK   +P+     +  I + L     VI ETG + F   + + P G     Q+ +GSIG+SVGA  G A +  E   +R I  +GDGS Q+T Q++STM+R     IIF+I N GYTIE  IH  +  YN I+ W+Y  L  A   G+
Sbjct:  362 PDDEPKSGDQPITHRWFWPKIGQWLKENDIVITETGTANFGIWETRFPAGVTAISQVLWGSIGYSVGACQGAALAAKEQGNRRTILFVGDGSIQLTLQEISTMIRNKLNPIIFVICNEGYTIERYIHGWEASYNDIQQWDYKSLPVAFGAGK 513          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: DCIP_ENTCL (Indole-3-pyruvate decarboxylase OS=Enterobacter cloacae GN=ipdC PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18
Identity = 52/154 (33.77%), Postives = 83/154 (53.90%), Query Frame = 2
Query:  206 GQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIH-NGEGKCW 658
            G  P  +P   L     ++ +Q  +     ++A+ G S F    L+LP    +  Q  +GSIG+++ A  G   + P +RVI   GDG+ Q+T Q++ +MLR  Q  II ++NN GYT+E  IH  +  YN I  WN+T +  A+  + + +CW
Sbjct:  349 GAIPFPQPDGSLTQENFWRTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRYNDIALWNWTHIPQALSLDPQSECW 502          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC_ASPOR (Pyruvate decarboxylase OS=Aspergillus oryzae GN=pdcA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17
Identity = 62/208 (29.81%), Postives = 106/208 (50.96%), Query Frame = 2
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE--KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGL 622
            D+++ G+S  + +   +      V +     +  + MK  L+ + +R+ +      +     +P+ +  K   ++ +    L+  + + L  +  VI ETG + F     + P G     Q+ +GSIG+SVGA  G A +  E  +R +  +GDGSFQ+T Q+VSTM+R     IIF+I N GYTIE  IH  +  YN I+ W++  +
Sbjct:  300 DFNTTGFSYRIGQLNTIDFHSTYVRVRYSE-YPDINMKGVLQKIVQRMGNLNVGPVSPPSNLLPDNE--KASTEQAITHAWLWPTVGQWLKEKDVVITETGTANFGIWDTRFPAGVTAISQVLWGSIGYSVGACQGAALAAKEQGRRTVLFVGDGSFQLTLQEVSTMIRNNLNPIIFVICNEGYTIERYIHGWEAVYNDIQPWDFLNI 504          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC_EMENI (Pyruvate decarboxylase OS=Emericella nidulans GN=pdcA PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17
Identity = 55/134 (41.04%), Postives = 75/134 (55.97%), Query Frame = 2
Query:  266 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGK 652
            + + L     VI ETG + F     + P G     Q+ +GSIG+SVGA  G A +  E   +R +  +GDGS Q+T Q++STM+R     IIF+I N GYTIE  IH  D  YN I+ W+  GL  A   G+G+
Sbjct:  381 VGQWLKENDIVITETGTANFGIWDTRFPSGVTAISQVLWGSIGYSVGACQGAALAAKEQGNRRTVLWVGDGSLQLTLQEISTMIRNNLNPIIFVICNEGYTIERFIHGWDESYNDIQTWDIKGLPVAF-GGKGR 513          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC4_SCHPO (Putative pyruvate decarboxylase C3G9.11c OS=Schizosaccharomyces pombe GN=SPAC3G9.11c PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17
Identity = 56/124 (45.16%), Postives = 67/124 (54.03%), Query Frame = 2
Query:  278 LSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGA----TLGYAQS-VPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIK-NWNYTGLV 625
            L     V  ETG S F       PKGC    Q+ +GSIGWSVGA    TLG   S  P +R I  +GDGS  +T Q++S  +R G   IIF+INN GYTIE  IH     YN I   W+Y  L+
Sbjct:  384 LRESDVVTTETGTSNFGILDCIFPKGCQNLSQVLWGSIGWSVGAMFGATLGIKDSDAPHRRSILIVGDGSLHLTVQEISATIRNGLTPIIFVINNKGYTIERLIHGLHAVYNDINTEWDYQNLL 507          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: KDC_MYCLE (Alpha-keto-acid decarboxylase OS=Mycobacterium leprae GN=kdc PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.267e-16
Identity = 47/152 (30.92%), Postives = 82/152 (53.95%), Query Frame = 2
Query:  191 IYVPEGQPPKCEPKEPLRVN--VLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAI 634
            + +P G P    P    R+   +L+  +   L+    V+A+ G +++   + +LP+G  +  Q  +GSIG+++ A LG   +   +R +  +GDG+ Q+T Q++ +  R G   +I ++NN GYTIE  IH    PYN I  W +T +  A+
Sbjct:  349 VELPPGNPTADTPSPTQRLTQQILWDRLCAALTPGNVVLADQGTAFYGMVEHRLPRGVTFIGQPLWGSIGYTLPAALGAGLAHRNRRTVLLLGDGAAQLTIQELGSFYREGLSPVIVVVNNDGYTIERAIHGATAPYNNIARWRWTDIPGAL 500          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC_ASPTN (Pyruvate decarboxylase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pdcA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16
Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 2
Query:  254 LFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGL 622
            L+  + + L     VI ETG + F     + P       Q+ +GSIG+SVGA  G A +  E   +R +  +GDGS Q+T Q++STM+R     I+F+I N GYTIE  IH  D  YN I+ W+  GL
Sbjct:  378 LWPIVGQWLKERDIVITETGTANFGIWDTRFPANVTAISQVLWGSIGYSVGACQGAALAAKEQNNRRTVLFVGDGSLQLTVQEISTMIRNNLNPIVFVICNQGYTIERFIHGWDEAYNDIQPWDIKGL 505          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: PDC1_SCHPO (Putative pyruvate decarboxylase C13A11.06 OS=Schizosaccharomyces pombe GN=SPAC13A11.06 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15
Identity = 70/215 (32.56%), Postives = 100/215 (46.51%), Query Frame = 2
Query:   11 DYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPE-GQPPKCEPKEPLRVNVL-----FQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV-----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIK-NWNY 613
            D+++  +S  L ++ AV    D + I     +  V MK  L+ L K L ++       H    P  G   K +  E    N +     +    + L     +I ETG + F     + PK      Q+ +GSIG+SVGA  G   +V     P++R I  +GDGS Q+T  ++ST +R   K IIF+INN GYTIE  IH     YN I   W Y
Sbjct:  294 DFNTGSFSYHLSQKNAVEFHSDHMRIRYA-LYPNVAMKYILRKLLKVLDASMC-----HSKAAPTIGYNIKPKHAEGYSSNEITHCWFWPKFSEFLKPRDVLITETGTANFGVLDCRFPKDVTAISQVLWGSIGYSVGAMFGAVLAVHDSKEPDRRTILVVGDGSLQLTITEISTCIRHNLKPIIFIINNDGYTIERLIHGLHASYNEINTKWGY 502          
BLAST of CX295035 vs. ExPASy Swiss-Prot
Match: THI3_YEAST (Thiamine metabolism regulatory protein THI3 OS=Saccharomyces cerevisiae GN=THI3 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.075e-15
Identity = 54/163 (33.13%), Postives = 81/163 (49.69%), Query Frame = 2
Query:  194 YVPEGQPPKCEPKEPLRVNVLFQH------IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE----------KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH---DGPYNVIKNWNYTGLV 625
            Y P  QP    P+     NVL +       I         +I ETG S F   + + P       Q  +GS+G+++GA LG   +V E           RVI  +GDG+FQ+T Q++ST+++ G    IF++NN GY+++  +H   D  Y  I+ WNY GL+
Sbjct:  355 YQPSEQPSMMVPRPYPAGNVLLRQEWVWNEISHWFQPGDIIITETGASAFGVNQTRFPVNTLGISQALWGSVGYTMGACLGAEFAVQEINKDKFPATKHRVILFMGDGAFQLTVQELSTIVKWGLTPYIFVMNNQGYSVDRFLHHRSDASYYDIQPWNYLGLL 517          
The following BLAST results are available for this feature:
BLAST of CX295035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
KDC_MYCUA1.036e-1833.55Alpha-keto-acid decarboxylase OS=Mycobacterium ulc... [more]
PDC_ASPFU3.015e-1839.47Pyruvate decarboxylase OS=Aspergillus fumigatus GN... [more]
DCIP_ENTCL3.015e-1833.77Indole-3-pyruvate decarboxylase OS=Enterobacter cl... [more]
PDC_ASPOR3.334e-1729.81Pyruvate decarboxylase OS=Aspergillus oryzae GN=pd... [more]
PDC_EMENI5.687e-1741.04Pyruvate decarboxylase OS=Emericella nidulans GN=p... [more]
PDC4_SCHPO5.687e-1745.16Putative pyruvate decarboxylase C3G9.11c OS=Schizo... [more]
KDC_MYCLE1.267e-1630.92Alpha-keto-acid decarboxylase OS=Mycobacterium lep... [more]
PDC_ASPTN8.212e-1639.84Pyruvate decarboxylase OS=Aspergillus terreus (str... [more]
PDC1_SCHPO2.389e-1532.56Putative pyruvate decarboxylase C13A11.06 OS=Schiz... [more]
THI3_YEAST4.075e-1533.13Thiamine metabolism regulatory protein THI3 OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionC05065H06SK DroRLeaf1 Citrus clementina cDNA clone C05065H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295035 ID=CX295035; Name=CX295035; organism=Citrus clementina; type=EST; length=679bp
GAGGATTTATGACTATAGCTCGGTTGGGTACTCTCTTCTTCTCAAGAAGG
AGAAGGCAGTCATTCTGCAGCCTGATCGTGTGGTGATTGCTAATGGACCG
GCATTTGGTTGTGTTTTGATGAAGGATTTCCTCAAAGCACTTTCAAAGCG
GCTCAAAAGCAACACTACTGCTTATGAGAATTACCACAGGATTTATGTTC
CTGAGGGGCAACCTCCGAAGTGTGAACCCAAAGAGCCCTTGAGAGTGAAT
GTTCTGTTCCAACATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGAT
TGCTGAGACAGGGGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTA
AGGGATGCGGGTATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCT
GTTGGTGCTACTCTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCAT
TGCTTGCATAGGTGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAA
CAATGCTGCGATGTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGT
GGTTACACCATTGAAGTTGAGATCCATGATGGACCGTACAATGTGATCAA
GAACTGGAACTACACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCA
AGTGCTGGACAACCAAGGTCTTCTGCGAG
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