CX295036

Overview
NameCX295036
Unique NameCX295036
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA2_ACEAT (V-type proton ATPase catalytic subunit A isoform 2 OS=Acetabularia acetabulum PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.241e-77
Identity = 144/194 (74.23%), Postives = 163/194 (84.02%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA--GMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALV 581
            IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  ALE FYE+FD DF++IR  AREVLQ+ED+LNEIVQLVGKDALAE DKI LETA  L+EDYLAQN+FT YDK+CPFYKSV MMRNI+ F+ LA QA+E+ A    DGQK+   +IK +LGDL Y++ SQKFEDP    ++V
Sbjct:  397 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYLNALEPFYEKFDNDFVDIRQVAREVLQKEDELNEIVQLVGKDALAESDKIILETADFLKEDYLAQNSFTKYDKYCPFYKSVGMMRNIVTFHRLATQAIERTATGNSDGQKLLSNIIKAKLGDLLYKVSSQKFEDPSDGESVV 590          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CYACA (V-type proton ATPase catalytic subunit A OS=Cyanidium caldarium PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 5.967e-72
Identity = 133/191 (69.63%), Postives = 156/191 (81.68%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTAL 578
            IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  ALE +YE+  P+F+N + KARE+LQ EDDL EIVQLVGKD+LAE DKITLE AK++RED+LAQN+FT YD+FCPFYKSV M+RN+IHFY LAN+AVE   G   Q +T   IK ++G+  Y++   KF DP +  +L
Sbjct:  399 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMKALEPYYEERFPEFLNYQQKAREILQTEDDLMEIVQLVGKDSLAENDKITLEVAKMIREDFLAQNSFTEYDRFCPFYKSVLMLRNMIHFYELANKAVE---GSGEQHLTLAQIKEQMGETIYKISGMKFLDPAQGWSL 586          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CAEBR (V-type proton ATPase catalytic subunit A OS=Caenorhabditis briggsae GN=vha-13 PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 7.294e-70
Identity = 124/185 (67.03%), Postives = 156/185 (84.32%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP 560
            IVGAVSPPGGDF+DPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY  ALE FYE+  P+F+++RTK +E+LQ E+DL+EIVQLVGK +LAE DKITLE AK++++D+L QN +TPYD+FCPFYK+V M++N+I FY+LA  +VE  A  +  KIT+ +IK  +GDL Y+L + KF+DP
Sbjct:  395 IVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALEEFYEKNYPEFVHLRTKCKEILQEEEDLSEIVQLVGKASLAESDKITLEVAKIIKDDFLQQNGYTPYDRFCPFYKTVGMLKNMIGFYDLARHSVEATAQSE-NKITWNVIKDNMGDLIYQLSAMKFKDP 578          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PONAB (V-type proton ATPase catalytic subunit A OS=Pongo abelii GN=ATP6V1A PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.244e-69
Identity = 126/187 (67.38%), Postives = 156/187 (83.42%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQK 566
            IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYDKFCPFYK+V M+ N+I FY++A +AVE  A  D  KIT+++I+  +GD+ Y+L S KF+DP K
Sbjct:  406 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDKFCPFYKTVGMLSNMIAFYDMARRAVETTAQSD-NKITWSIIREHMGDILYKLSSMKFKDPLK 591          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HUMAN (V-type proton ATPase catalytic subunit A OS=Homo sapiens GN=ATP6V1A PE=1 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 2.772e-69
Identity = 125/187 (66.84%), Postives = 156/187 (83.42%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQK 566
            IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYD+FCPFYK+V M+ N+I FY++A +AVE  A  D  KIT+++I+  +GD+ Y+L S KF+DP K
Sbjct:  406 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSD-NKITWSIIREHMGDILYKLSSMKFKDPLK 591          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PIG (V-type proton ATPase catalytic subunit A OS=Sus scrofa GN=ATP6V1A PE=2 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 4.728e-69
Identity = 125/187 (66.84%), Postives = 156/187 (83.42%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQK 566
            IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYD+FCPFYK+V M+ N+I FY+LA +AVE  A  D  KIT+++I+  +G++ Y+L S KF+DP K
Sbjct:  406 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDLARRAVETTAQSD-NKITWSIIREHMGEILYKLSSMKFKDPVK 591          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CAEEL (V-type proton ATPase catalytic subunit A OS=Caenorhabditis elegans GN=vha-13 PE=1 SV=3)

HSP 1 Score: 260.766 bits (665), Expect = 4.728e-69
Identity = 123/185 (66.49%), Postives = 155/185 (83.78%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP 560
            IVGAVSPPGGDF+DPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYS+Y  ALE FYE+  P+F+++RTK +E+LQ E+DL+EIVQLVGK +LAE DK+TLE AK++++D+L QN +T YD+FCPFYK+V M++N+I FY+LA  AVE  A  D  KIT+ +IK  +GDL Y+L + KF+DP
Sbjct:  395 IVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSEYMRALEEFYEKNYPEFVSLRTKCKEILQEEEDLSEIVQLVGKASLAESDKVTLEVAKIIKDDFLQQNGYTKYDRFCPFYKTVGMLKNMIGFYDLARHAVEATAQSD-NKITWNVIKDSMGDLIYQLSAMKFKDP 578          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_MOUSE (V-type proton ATPase catalytic subunit A OS=Mus musculus GN=Atp6v1a PE=1 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 6.175e-69
Identity = 124/187 (66.31%), Postives = 156/187 (83.42%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQK 566
            IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYD+FCPFYK+V M+ N+I FY++A +AVE  A  D  KIT+++I+  +G++ Y+L S KF+DP K
Sbjct:  406 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMISFYDMARRAVETTAQSD-NKITWSIIREHMGEILYKLSSMKFKDPVK 591          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BOVIN (V-type proton ATPase catalytic subunit A OS=Bos taurus GN=ATP6V1A PE=2 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 8.065e-69
Identity = 124/187 (66.31%), Postives = 156/187 (83.42%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQK 566
            IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYD+FCPFYK+V M+ N+I FY++A +AVE  A  D  KIT+++I+  +G++ Y+L S KF+DP K
Sbjct:  406 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSD-NKITWSIIREHMGEILYKLSSMKFKDPVK 591          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CHICK (V-type proton ATPase catalytic subunit A OS=Gallus gallus GN=ATP6V1A PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.797e-68
Identity = 123/187 (65.78%), Postives = 155/187 (82.89%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQK 566
            IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY+ AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYD+FCPFYK+V M+ N+I FY++  +AVE  A  D  KIT+++I+  + ++ YRL S KF+DP K
Sbjct:  406 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYTRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMRRRAVENTAQSD-NKITWSIIRENMSEILYRLTSMKFKDPVK 591          
The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
VATA2_ACEAT1.241e-7774.23V-type proton ATPase catalytic subunit A isoform 2... [more]
VATA_CYACA5.967e-7269.63V-type proton ATPase catalytic subunit A OS=Cyanid... [more]
VATA_CAEBR7.294e-7067.03V-type proton ATPase catalytic subunit A OS=Caenor... [more]
VATA_PONAB1.244e-6967.38V-type proton ATPase catalytic subunit A OS=Pongo ... [more]
VATA_HUMAN2.772e-6966.84V-type proton ATPase catalytic subunit A OS=Homo s... [more]
VATA_PIG4.728e-6966.84V-type proton ATPase catalytic subunit A OS=Sus sc... [more]
VATA_CAEEL4.728e-6966.49V-type proton ATPase catalytic subunit A OS=Caenor... [more]
VATA_MOUSE6.175e-6966.31V-type proton ATPase catalytic subunit A OS=Mus mu... [more]
VATA_BOVIN8.065e-6966.31V-type proton ATPase catalytic subunit A OS=Bos ta... [more]
VATA_CHICK1.797e-6865.78V-type proton ATPase catalytic subunit A OS=Gallus... [more]

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Properties
Property NameValue
Genbank descriptionC05065H07SK DroRLeaf1 Citrus clementina cDNA clone C05065H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bp
GAGGCATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCT
GTAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAA
GAAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTT
ACTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCG
GATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGA
TGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAG
GAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTT
GCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTC
TGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCAATCAGG
CCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACCCTT
ATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAAGTT
TGAGGACCCACAGAAGAGAACAGCTCTGGTTGCTAAATTCAAAAGCTGCA
TGAGGATCTGACCGCTGGTTTCGCGCCTCGAGATGAACTCGATGATGAAG
GTCAGTAGATCTTGTATCAG
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