CX295036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BORRA (V-type ATP synthase alpha chain OS=Borrelia recurrentis (strain A1) GN=atpA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15 Identity = 48/139 (34.53%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 12 GAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIH 428 G+VSP GG+F +PVT ATL +V F GL ++ + + FP++N L S+SKY +E YE + AR L + +++N+++++VG+D ++ D + ++LL YL QN+F D F + +M NI++ Sbjct: 392 GSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAINPLDSWSKYRGVVE--YEATE--------YARAFLVKGNEVNQMMRVVGEDGVSIDDFVVYLKSELLDSCYLQQNSFDSVDAAVSFERQNYMF-NILY 519
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BORDL (V-type ATP synthase alpha chain OS=Borrelia duttonii (strain Ly) GN=atpA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15 Identity = 48/139 (34.53%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 12 GAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIH 428 G+VSP GG+F +PVT ATL +V F GL ++ + + FP++N L S+SKY +E YE + AR L + +++N+++++VG+D ++ D + ++LL YL QN+F D F + +M NI++ Sbjct: 392 GSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAINPLDSWSKYRGVVE--YEATE--------YARAFLVKGNEVNQMMRVVGEDGVSIDDFVVYLKSELLDSCYLQQNSFDSVDAAVSFERQNYMF-NILY 519
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BORT9 (V-type ATP synthase alpha chain OS=Borrelia turicatae (strain 91E135) GN=atpA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.144e-14 Identity = 43/122 (35.25%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 12 GAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 377 G+VSP GG+F +PVT ATL +V F GL ++ + + FP++N L S+SKY +ES + AR L + +++N+++++VG++ ++ GD + ++LL YL QN+F D Sbjct: 392 GSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAINPLESWSKYRGVVESEKTGY----------ARSFLAKGNEINQMMKVVGEEGISIGDFLVYLKSELLDACYLQQNSFDSVD 503
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BORGA (V-type ATP synthase alpha chain OS=Borrelia garinii GN=atpA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.683e-14 Identity = 40/122 (32.79%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 12 GAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 377 G+VSP GG+F +PVT ATL +V F GL ++ + + FP+++ L S+SKY ++S ++ AR L + +++N+++++VG++ ++ D + ++LL YL QN+F D Sbjct: 392 GSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAISPLESWSKYKGVIDSKKAEY----------ARSFLVKGNEINQMMKVVGEEGISSEDFLIYLKSELLDSCYLQQNSFDSVD 503
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BORBZ (V-type ATP synthase alpha chain OS=Borrelia burgdorferi (strain ZS7) GN=atpA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13 Identity = 39/122 (31.97%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 12 GAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 377 G+VSP GG+F +PVT ATL +V F GL ++ + + FP+++ L S+SKY ++ ++ AR L + +++N+++++VG++ ++ D + ++LL YL QN+F D Sbjct: 392 GSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAISPLESWSKYKGVIDQKKTEY----------ARSFLVKGNEINQMMKVVGEEGISNDDFLIYLKSELLDSCYLQQNSFDSID 503
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BORBU (V-type ATP synthase alpha chain OS=Borrelia burgdorferi GN=atpA PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13 Identity = 39/122 (31.97%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 12 GAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 377 G+VSP GG+F +PVT ATL +V F GL ++ + + FP+++ L S+SKY ++ ++ AR L + +++N+++++VG++ ++ D + ++LL YL QN+F D Sbjct: 392 GSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAISPLESWSKYKGVIDQKKTEY----------ARSFLVKGNEINQMMKVVGEEGISNDDFLIYLKSELLDSCYLQQNSFDSID 503
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BORAP (V-type ATP synthase alpha chain OS=Borrelia afzelii (strain PKo) GN=atpA PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13 Identity = 39/122 (31.97%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 12 GAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 377 G+VSP GG+F +PVT ATL +V F GL ++ + + FP+++ L S+SKY ++S ++ R L + +++N+++++VG++ ++ D + ++LL YL QN+F D Sbjct: 392 GSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAISPLESWSKYKGVIDSKKTEY----------VRSFLVKGNEINQMMKVVGEEGISNEDFLIYLKSELLDSCYLQQNSFDSID 503
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA1_TREPA (V-type ATP synthase alpha chain 1 OS=Treponema pallidum GN=atpA1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12 Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCP 389 I G VSP GG+F +PVT ATL +V F GL ++ + + +P+V+ L S+SKY + L++ + R L+R ++ +++++VG++ + D + L YL QN+F D P Sbjct: 391 IGGTVSPAGGNFEEPVTQATLKVVGAFHGLSRERSDARRYPAVHPLDSWSKYPSVLDARAVAY----------GRSFLRRGAEVEQMMRVVGEEGTSMEDFLVYLKGSFLDSVYLQQNSFDTVDSAVP 508
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_TREDE (V-type ATP synthase alpha chain OS=Treponema denticola GN=atpA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 40/124 (32.26%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 377 I G VSP GG+F +PVT ATL +V F GL ++ + + +P+++ L S+SKY + L ++ R L+R ++ +++++VG++ + D I LL YL QN+F D Sbjct: 391 IGGTVSPAGGNFEEPVTQATLKVVGAFHGLSRERSDARKYPAIHPLDSWSKYPSVLPLEQVKY----------GRSFLRRGTEVEQMMKVVGEEGTSIEDFIIYLKGDLLDAVYLQQNSFDKVD 504 The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bpback to top |