CX295036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THEON (V-type ATP synthase alpha chain OS=Thermococcus onnurineus (strain NA1) GN=atpA PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.531e-40 Identity = 80/172 (46.51%), Postives = 121/172 (70.35%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLG 518 ++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y +++ ++ + DP++ +R +A E+LQ+E +L EIV++VG DAL + +K L A++LREDYL Q+AF D +CP K V MMR I++FY +AV++G +D +I ++ ++G Sbjct: 385 VIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYIDSIQDWWHKNVDPEWRAMRDRAMELLQKEAELQEIVRIVGPDALPDREKAVLIVARMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYERTMEAVDRGVPVD--EIAKLPVREKIG 554
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THEGJ (V-type ATP synthase alpha chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=atpA PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.531e-40 Identity = 87/194 (44.85%), Postives = 129/194 (66.49%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFE-DPQKRTALV 581 ++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ ++ + DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FYN +AV++G +D +I ++ ++G + KFE D +K AL+ Sbjct: 385 VIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYLDAVQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYNRTMEAVDRGVPVD--EIARLPVREKIGRM-------KFEPDVEKIRALI 569
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PYRFU (V-type ATP synthase alpha chain OS=Pyrococcus furiosus GN=atpA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.612e-40 Identity = 87/196 (44.39%), Postives = 128/196 (65.31%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFE-DPQKRTALVAK 587 ++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ ++ + DP++ +R KA E+LQ+E +L EIV++VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR ++ FY A+ +G + ++I ++ +G + KFE D +K AL+ K Sbjct: 813 VIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVQDWWHKNVDPEWRRMRDKAMELLQKEAELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPQKQVTMMRVLMTFYERTMDAISRGVPL--EEIAKLPVREEIGRM-------KFEPDIEKIRALIDK 999
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METMJ (V-type ATP synthase alpha chain OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=atpA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.612e-40 Identity = 81/155 (52.26%), Postives = 110/155 (70.97%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467 ++GAVSPPGGDFS+PVT TL IV+VFW LD KL+QR+HFP++NWL SYS Y AL +Y+ + P++ +R A VLQ+E +L EIVQLVG DAL + +++T+E A+++RE +L QNA+ D FCP K MM+ I H+ +LA A GA Sbjct: 386 VIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYLDALNEWYDKEVSPEWNPLRAWAMGVLQKEAELQEIVQLVGSDALPDEEQVTIEVARMIREIFLQQNAYDAVDTFCPMSKQYDMMKAIKHYADLARTAQTGGA 540
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_META3 (V-type ATP synthase alpha chain OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=atpA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.612e-40 Identity = 87/176 (49.43%), Postives = 119/176 (67.61%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530 IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y +E ++ E D+ IR +A +LQ+E +L EIVQLVG DAL + +++ LE +++LRED+L Q+AF+ D +C K M++ I+ FY+ A AVEKGA D I +K + + Y Sbjct: 387 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLQSYSLYLDDIEDWWKENTAEDWREIRDEAMNLLQKEAELQEIVQLVGPDALPDKERVILEVSRMLREDFLQQDAFSDIDSYCSPMKQYTMLKTIMTFYSKAILAVEKGA--DPADIAKVSVKQDVAKMKY 560
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THESI (V-type ATP synthase alpha chain OS=Thermococcus sp. (strain KI) GN=atpA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.023e-40 Identity = 87/194 (44.85%), Postives = 128/194 (65.98%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFE-DPQKRTALV 581 ++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ ++ + DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FY QAV++G +D +I ++ ++G + KFE D +K AL+ Sbjct: 385 VIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYVDAIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYEKTMQAVDRGVPVD--EIAKLPVREKIGRM-------KFEPDVEKVRALI 569
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PYRKO (V-type ATP synthase alpha chain OS=Pyrococcus kodakaraensis GN=atpA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.023e-40 Identity = 87/194 (44.85%), Postives = 128/194 (65.98%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFE-DPQKRTALV 581 ++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ ++ + DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FY QAV++G +D +I ++ ++G + KFE D +K AL+ Sbjct: 385 VIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYIDAIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYEKTMQAVDRGVPVD--EIAKLPVREKIGRM-------KFEPDVEKVRALI 569
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PYRHO (V-type ATP synthase alpha chain OS=Pyrococcus horikoshii GN=atpA PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.342e-39 Identity = 82/182 (45.05%), Postives = 125/182 (68.68%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDL-FYRLVSQ 545 ++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ ++ + DP++ +R KA +LQ+E +L EIV++VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++FY+ +A+ +G + ++I ++ +G + F R VS+ Sbjct: 764 VIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNIDPEWKAMRDKAMALLQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAINRGVPL--EEIAKLPVREEIGRMKFERDVSK 943
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METJA (V-type ATP synthase alpha chain OS=Methanocaldococcus jannaschii GN=atpA PE=3 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.752e-39 Identity = 86/176 (48.86%), Postives = 118/176 (67.05%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530 IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y E + PD+ +R +A +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+AF D +CP K M++ I+ FY A +AVE+ G++ KI +K + + Y Sbjct: 388 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLQSYSLYIDDVTEWWNTNTGPDWRQLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEVARMLREDFLQQDAFDEVDTYCPPMKQYLMLKIIMTFYQEALKAVER--GVEPAKILGVSVKQDIARMKY 561
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STAMF (V-type ATP synthase alpha chain OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=atpA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39 Identity = 78/158 (49.37%), Postives = 112/158 (70.89%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476 I+GAVSPPG DFS+PVT ATL IV+ + LD LA R+H+P++NWLISYS Y + +++ DP + +R KA +LQ+E +L E+V+LVG +AL E DK+ LE A+++RED+L QNAF D +CP K+V MM+ I+ FY L +A+++G M+ Sbjct: 385 IMGAVSPPGADFSEPVTQATLRIVRALYALDVNLAYRRHYPAINWLISYSLYVDNVTDWWHKNIDPSWRELREKALAILQKEAELEELVRLVGAEALPEEDKLLLEVARMIREDFLQQNAFHEIDTYCPPRKAVLMMKAIMLFYELGLEAIKRGISME 542 The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bpback to top |