CX295036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METTP (V-type ATP synthase alpha chain OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=atpA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39 Identity = 78/158 (49.37%), Postives = 109/158 (68.99%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476 +VGAVSPPGGDF++PVT TL IV+VFW LD +L QR+HFPS+NWL SYS Y LES+Y E PD+ ++ +A +LQ +L EIV LVG DAL E ++TLE A+++ +LAQ+AF P D FCP+ K +++ I+ + + A A+ +G +D Sbjct: 380 VVGAVSPPGGDFTEPVTQNTLRIVKVFWALDSRLTQRRHFPSINWLDSYSLYEKDLESWYAENVAPDWNQLKRRAMAILQENAELEEIVMLVGSDALPEDQQLTLEVARMIINFWLAQSAFHPVDTFCPYKKQYDLLKAILTYRDYAFDALRRGVAVD 537
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_DESSY (V-type ATP synthase alpha chain OS=Desulfurococcus sp. (strain SY) GN=atpA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39 Identity = 85/194 (43.81%), Postives = 128/194 (65.98%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFE-DPQKRTALV 581 ++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y +++ ++ + DP++ +R A +LQ+E +L EIV++VG DAL + +K L ++LREDYL Q+AF D +CP K V MMR I++FY +AV++G +D +I ++ ++G + KFE D +K AL+ Sbjct: 385 VIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYLDSIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYERTMEAVDRGVPVD--EIAKLPVREKIGRM-------KFEPDIEKIRALI 569
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METAC (V-type ATP synthase alpha chain OS=Methanosarcina acetivorans GN=atpA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.099e-39 Identity = 80/153 (52.29%), Postives = 106/153 (69.28%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 +GAVSPPGGDFS+PVT TL IV+VFW LD KL+QR+HFP++NWL SYS Y L F E PD++ +R KA ++LQ E +L EIVQLVG DAL E ++ LE +++RE YL QNAF P D + PF K +M+ I+ + + A A++ G Sbjct: 381 IGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKEDLNDWFTENVAPDYVAMREKAMDMLQTESELQEIVQLVGSDALPEEQQLLLEITRMIREIYLQQNAFHPIDTYSPFAKQYKIMQAIMKYGDAAMDALKSG 533
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRSV (V-type ATP synthase alpha chain OS=Streptococcus sanguinis (strain SK36) GN=atpA PE=3 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 6.659e-39 Identity = 80/154 (51.95%), Postives = 110/154 (71.43%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467 +GAVSPPGGD S+PVT TL IV+VFWGLD +LAQR+HFP++NWL SYS Y + ++ +Q + + TKA +LQ+E +L EIV+LVG D+L+E D++T+ AK++REDYL QNAF D + F K V ++ NI+ F AN+A+E GA Sbjct: 388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAQLAQRRHFPAINWLSSYSLYLDEVGAYIDQHEKIAWAEKVTKAMNILQKESELQEIVRLVGLDSLSEKDRLTMNAAKMIREDYLQQNAFDDVDTYTSFKKQVALLSNILTFDAEANRALELGA 541
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRGC (V-type ATP synthase alpha chain OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=atpA PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.659e-39 Identity = 80/154 (51.95%), Postives = 110/154 (71.43%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467 +GAVSPPGGD S+PVT TL IV+VFWGLD +LAQR+HFP++NWL SYS Y + ++ +Q + + TKA +LQ+E +L EIV+LVG D+L+E D++T+ AK++REDYL QNAF D + F K V ++ NI+ F AN+A+E GA Sbjct: 388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAQLAQRRHFPAINWLSSYSLYLDEVGAYIDQHEKIAWAEKVTKAMNILQKESELQEIVRLVGLDSLSEKDRLTMNAAKMIREDYLQQNAFDDVDTYTSFKKQVALLSNILTFDAEANRALELGA 541
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METS3 (V-type ATP synthase alpha chain OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=atpA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.697e-39 Identity = 85/176 (48.30%), Postives = 114/176 (64.77%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530 +VGAVSPPGGD S+PVT TL I +VFW LD LA ++HFPS++WL SYS Y ++E ++ E D+ R +A +LQ+E +L EIVQLVG DAL E D+ TLET ++LRED+L QNAF D +CP K M++ I+ F+ A AV G G+ Q I +K +G + Y Sbjct: 387 VVGAVSPPGGDLSEPVTQNTLRICKVFWALDASLADKRHFPSIDWLQSYSLYVDSIEGWWAENVAADWRETRDQAMILLQKESELQEIVQLVGPDALPEADQATLETTRMLREDFLQQNAFDDIDTYCPPVKQYNMLKTILLFHKEALAAV--GRGVPIQNIVALPVKEEIGKMKY 560
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA1_METHJ (V-type ATP synthase alpha chain 1 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA1 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.697e-39 Identity = 84/176 (47.73%), Postives = 118/176 (67.05%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530 ++GAVSPPGGDFS+PVT TL IV+ FW LD KL+QR+HFP++NWL SYS Y L +Y E P++ +RT A EVLQ+E +L EIVQLVG DAL + +++T+E A++LRE +L QNAF P D +C K +++ I + + A A++ AG+ +IT K+ L + Y Sbjct: 383 VIGAVSPPGGDFSEPVTQNTLRIVKCFWALDAKLSQRRHFPAINWLNSYSLYLDTLSQYYDENVSPEWNPLRTWAMEVLQKEAELQEIVQLVGSDALPDEEQVTIEVARMLREIFLQQNAFDPVDTYCDMTKQFDILKAIRFYSDQAYAALK--AGVITSQITGLKAKNDLPQIKY 556
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METST (V-type ATP synthase alpha chain OS=Methanosphaera stadtmanae (strain DSM 3091) GN=atpA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.937e-38 Identity = 83/176 (47.16%), Postives = 116/176 (65.91%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530 +VGAVSPPGGD S+PVT TL I +VFW LD LA R+HFPS+NWL SYS Y ++ +++ Q D+ ++R A +LQ+E +LNEIVQLVG DAL + D++TLE+A++LRED+L QNAF D +C K M++ I+ + A A+ GA D K+ ++ LG + Y Sbjct: 386 VVGAVSPPGGDLSEPVTQNTLRIAKVFWALDASLADRRHFPSINWLNSYSLYVDSITNWWNSQIGSDWRDLRNTAMALLQKESELNEIVQLVGPDALPQKDRVTLESARMLREDFLQQNAFDDTDTYCSPSKQYNMLKTILLYNTTAQSALADGA--DINKLVNLDVRVDLGKMKY 559
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_UNCMA (V-type ATP synthase alpha chain OS=Uncultured methanogenic archaeon RC-I GN=atpA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.530e-38 Identity = 76/157 (48.41%), Postives = 110/157 (70.06%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGM 473 ++GAVSP GGD S+PVT TL IV+VFW LD KLAQR+HFPS+NWL SYS Y +L+ +Y++ P++ ++ ++ E+LQRE +L EIVQLVG DAL E ++T+E A+++RE +L QNA+ D +C K + M+++I+ F A A+ G M Sbjct: 381 VIGAVSPAGGDISEPVTQNTLRIVKVFWALDAKLAQRRHFPSINWLNSYSLYQDSLKDWYDKNISPEWNQLKAESMELLQRESELQEIVQLVGSDALPEDQQLTIEIARMIREIFLQQNAYHEVDTYCSLDKQLKMLKSIMQFGAYARTALASGVPM 537
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPI (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=atpA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.530e-38 Identity = 80/154 (51.95%), Postives = 108/154 (70.13%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD-PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467 +GAVSPPGGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y ++ ++ + + D+ + T+A LQRE L EIV+LVG D+L+E +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDDKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSENERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541 The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bpback to top |