CX295036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRP4 (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=atpA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38 Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467 +GAVSPPGGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y ++ ++ + + D+ + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METMA (V-type ATP synthase alpha chain OS=Methanosarcina mazei GN=atpA PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38 Identity = 77/153 (50.33%), Postives = 106/153 (69.28%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 +GAVSPPGGDFS+PVT TL IV+VFW LD KL+Q++HFP++NWL SYS Y L F E PD++ +R +A ++LQ E +L EIVQLVG DAL E ++ LE +++RE +L QNAF P D + PF K +M+ I+ + + A A++ G Sbjct: 381 IGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQKRHFPAINWLNSYSLYKEDLNDWFTENVAPDYVPMRERAMDMLQTESELQEIVQLVGSDALPEEQQLLLEITRMIREIFLQQNAFHPIDTYSPFEKQYKIMKAIMKWGDAAMDALKSG 533
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METMP (V-type ATP synthase alpha chain OS=Methanococcus maripaludis GN=atpA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37 Identity = 80/159 (50.31%), Postives = 110/159 (69.18%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDG 479 IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + +++Q D+ ++R +A +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+ D +C K M++ I+ FY AV KGA G Sbjct: 386 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPLKQYNMLKIIMTFYKKGLDAVAKGADPAG 544
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOPS (V-type ATP synthase alpha chain OS=Clostridium perfringens (strain SM101 / Type A) GN=atpA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37 Identity = 92/202 (45.54%), Postives = 127/202 (62.87%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD----PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKFKSCM 602 +GAVSPPGGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y LE E D D+ +RT+A +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF D + K M+ I+ F + A +A+E G +D K+ ++ R+ Y +S+ E+ K ++ + KS M Sbjct: 387 IGAVSPPGGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFRHEAEKALEAGVYLD--KVLKLPVRDRIARSKY--ISE--EEISKMDDILVELKSEM 579
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOPE (V-type ATP synthase alpha chain OS=Clostridium perfringens GN=atpA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37 Identity = 92/202 (45.54%), Postives = 127/202 (62.87%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD----PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKFKSCM 602 +GAVSPPGGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y LE E D D+ +RT+A +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF D + K M+ I+ F + A +A+E G +D K+ ++ R+ Y +S+ E+ K ++ + KS M Sbjct: 387 IGAVSPPGGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFKHEAEKALEAGVYLD--KVLKLPVRDRIARSKY--ISE--EEISKMDDILVELKSEM 579
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOP1 (V-type ATP synthase alpha chain OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=atpA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37 Identity = 92/202 (45.54%), Postives = 127/202 (62.87%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD----PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKFKSCM 602 +GAVSPPGGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y LE E D D+ +RT+A +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF D + K M+ I+ F + A +A+E G +D K+ ++ R+ Y +S+ E+ K ++ + KS M Sbjct: 387 IGAVSPPGGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFKHEAEKALEAGVYLD--KVLKLPVRDRIARSKY--ISE--EEISKMDDILVELKSEM 579
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA1_CLOTE (V-type ATP synthase alpha chain 1 OS=Clostridium tetani GN=atpA1 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37 Identity = 79/153 (51.63%), Postives = 105/153 (68.63%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 +GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + E D++ +R KA +LQ E +L EI +LVG DAL+E D++ LE AK LREDYL QNAF D + P K M++ ++ F + A +A+E G Sbjct: 388 IGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLDKVGPWMNENVAEDWVELRQKAMALLQEEANLQEIARLVGIDALSEEDRLKLEVAKSLREDYLQQNAFHDVDTYAPLNKQYRMLKAVLQFGDEARKALESG 540
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THET2 (V-type ATP synthase alpha chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=atpA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.640e-37 Identity = 80/176 (45.45%), Postives = 114/176 (64.77%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530 IVGAVSPPGGD S+PVT +TL IV FW LD LA R+HFP++NW SYS +++AL+ +Y E D+ +R E+LQRE L EIVQLVG DAL + +++ +E +++RED+L QNAF D +C K+ +M+ I+ FY A A+++G +D +I + R+G Y Sbjct: 380 IVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAFHEVDAYCSMRKAYGIMKMILAFYKEAEAAIKRGVSID--EILQLPVVERIGRARY 553
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HYPBU (V-type ATP synthase alpha chain OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=atpA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.640e-37 Identity = 79/197 (40.10%), Postives = 120/197 (60.91%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKFK 593 IVGAVSPPGGDF++PVT+ T ++VFW LD +LA +H+P++NWL+SYS Y T + ++E P ++ R +A E+L RED+L EIV+LVG + L+E DK+ LE A +++ +L QNAF P D F K + II FY+ A +A+++G +T I+ +L L+ ++ P + + K K Sbjct: 390 IVGAVSPPGGDFTEPVTANTKRFIRVFWALDARLAYSRHYPAINWLVSYSAYVETVAKWWHENISPKWLEYRNEAYEILLREDELREIVRLVGTEGLSEKDKLILEIANIIKTGFLQQNAFDPVDAFATPQKQWKQLETIIDFYHAALEAIKRG-------VTVKEIREKLAPKIRELILARYNVPNDQLEKLDKLK 579
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METM5 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=atpA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37 Identity = 80/159 (50.31%), Postives = 110/159 (69.18%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDG 479 IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + ++ E D+ ++R +A +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+ D +C K M++ I+ +Y A AV KGA G Sbjct: 386 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQENTAADWRSLRDEAMTLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPLKQYNMLKIIMTYYTKALDAVAKGADPAG 544 The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bpback to top |