CX295036

Overview
NameCX295036
Unique NameCX295036
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRP4 (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=atpA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38
Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y  ++ ++ + +   D+ +  T+A   LQRE  L EIV+LVG D+L++ +++T+E AK +REDYL QNAF   D F  F K   M+ NI+ F + AN A+E G+
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METMA (V-type ATP synthase alpha chain OS=Methanosarcina mazei GN=atpA PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38
Identity = 77/153 (50.33%), Postives = 106/153 (69.28%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            +GAVSPPGGDFS+PVT  TL IV+VFW LD KL+Q++HFP++NWL SYS Y   L   F E   PD++ +R +A ++LQ E +L EIVQLVG DAL E  ++ LE  +++RE +L QNAF P D + PF K   +M+ I+ + + A  A++ G
Sbjct:  381 IGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQKRHFPAINWLNSYSLYKEDLNDWFTENVAPDYVPMRERAMDMLQTESELQEIVQLVGSDALPEEQQLLLEITRMIREIFLQQNAFHPIDTYSPFEKQYKIMKAIMKWGDAAMDALKSG 533          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METMP (V-type ATP synthase alpha chain OS=Methanococcus maripaludis GN=atpA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 80/159 (50.31%), Postives = 110/159 (69.18%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDG 479
            IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +  +++Q    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ FY     AV KGA   G
Sbjct:  386 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPLKQYNMLKIIMTFYKKGLDAVAKGADPAG 544          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOPS (V-type ATP synthase alpha chain OS=Clostridium perfringens (strain SM101 / Type A) GN=atpA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 92/202 (45.54%), Postives = 127/202 (62.87%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD----PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKFKSCM 602
            +GAVSPPGGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y   LE   E  D     D+  +RT+A  +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF   D +    K   M+  I+ F + A +A+E G  +D  K+    ++ R+    Y  +S+  E+  K   ++ + KS M
Sbjct:  387 IGAVSPPGGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFRHEAEKALEAGVYLD--KVLKLPVRDRIARSKY--ISE--EEISKMDDILVELKSEM 579          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOPE (V-type ATP synthase alpha chain OS=Clostridium perfringens GN=atpA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 92/202 (45.54%), Postives = 127/202 (62.87%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD----PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKFKSCM 602
            +GAVSPPGGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y   LE   E  D     D+  +RT+A  +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF   D +    K   M+  I+ F + A +A+E G  +D  K+    ++ R+    Y  +S+  E+  K   ++ + KS M
Sbjct:  387 IGAVSPPGGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFKHEAEKALEAGVYLD--KVLKLPVRDRIARSKY--ISE--EEISKMDDILVELKSEM 579          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOP1 (V-type ATP synthase alpha chain OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=atpA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 92/202 (45.54%), Postives = 127/202 (62.87%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD----PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKFKSCM 602
            +GAVSPPGGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y   LE   E  D     D+  +RT+A  +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF   D +    K   M+  I+ F + A +A+E G  +D  K+    ++ R+    Y  +S+  E+  K   ++ + KS M
Sbjct:  387 IGAVSPPGGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFKHEAEKALEAGVYLD--KVLKLPVRDRIARSKY--ISE--EEISKMDDILVELKSEM 579          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA1_CLOTE (V-type ATP synthase alpha chain 1 OS=Clostridium tetani GN=atpA1 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 79/153 (51.63%), Postives = 105/153 (68.63%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            +GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D++ +R KA  +LQ E +L EI +LVG DAL+E D++ LE AK LREDYL QNAF   D + P  K   M++ ++ F + A +A+E G
Sbjct:  388 IGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLDKVGPWMNENVAEDWVELRQKAMALLQEEANLQEIARLVGIDALSEEDRLKLEVAKSLREDYLQQNAFHDVDTYAPLNKQYRMLKAVLQFGDEARKALESG 540          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THET2 (V-type ATP synthase alpha chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=atpA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.640e-37
Identity = 80/176 (45.45%), Postives = 114/176 (64.77%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530
            IVGAVSPPGGD S+PVT +TL IV  FW LD  LA R+HFP++NW  SYS +++AL+ +Y E    D+  +R    E+LQRE  L EIVQLVG DAL + +++ +E  +++RED+L QNAF   D +C   K+  +M+ I+ FY  A  A+++G  +D  +I    +  R+G   Y
Sbjct:  380 IVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAFHEVDAYCSMRKAYGIMKMILAFYKEAEAAIKRGVSID--EILQLPVVERIGRARY 553          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HYPBU (V-type ATP synthase alpha chain OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=atpA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.640e-37
Identity = 79/197 (40.10%), Postives = 120/197 (60.91%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKFK 593
            IVGAVSPPGGDF++PVT+ T   ++VFW LD +LA  +H+P++NWL+SYS Y  T  + ++E   P ++  R +A E+L RED+L EIV+LVG + L+E DK+ LE A +++  +L QNAF P D F    K    +  II FY+ A +A+++G       +T   I+ +L      L+  ++  P  +   + K K
Sbjct:  390 IVGAVSPPGGDFTEPVTANTKRFIRVFWALDARLAYSRHYPAINWLVSYSAYVETVAKWWHENISPKWLEYRNEAYEILLREDELREIVRLVGTEGLSEKDKLILEIANIIKTGFLQQNAFDPVDAFATPQKQWKQLETIIDFYHAALEAIKRG-------VTVKEIREKLAPKIRELILARYNVPNDQLEKLDKLK 579          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METM5 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=atpA PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37
Identity = 80/159 (50.31%), Postives = 110/159 (69.18%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDG 479
            IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +  ++ E    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ +Y  A  AV KGA   G
Sbjct:  386 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQENTAADWRSLRDEAMTLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPLKQYNMLKIIMTYYTKALDAVAKGADPAG 544          
The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
VATA_STRP49.616e-3851.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_METMA9.616e-3850.33V-type ATP synthase alpha chain OS=Methanosarcina ... [more]
VATA_METMP1.256e-3750.31V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_CLOPS1.256e-3745.54V-type ATP synthase alpha chain OS=Clostridium per... [more]
VATA_CLOPE1.256e-3745.54V-type ATP synthase alpha chain OS=Clostridium per... [more]
VATA_CLOP11.256e-3745.54V-type ATP synthase alpha chain OS=Clostridium per... [more]
VATA1_CLOTE1.256e-3751.63V-type ATP synthase alpha chain 1 OS=Clostridium t... [more]
VATA_THET21.640e-3745.45V-type ATP synthase alpha chain OS=Thermus thermop... [more]
VATA_HYPBU1.640e-3740.10V-type ATP synthase alpha chain OS=Hyperthermus bu... [more]
VATA_METM52.142e-3750.31V-type ATP synthase alpha chain OS=Methanococcus m... [more]

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Properties
Property NameValue
Genbank descriptionC05065H07SK DroRLeaf1 Citrus clementina cDNA clone C05065H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bp
GAGGCATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCT
GTAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAA
GAAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTT
ACTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCG
GATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGA
TGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAG
GAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTT
GCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTC
TGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCAATCAGG
CCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACCCTT
ATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAAGTT
TGAGGACCCACAGAAGAGAACAGCTCTGGTTGCTAAATTCAAAAGCTGCA
TGAGGATCTGACCGCTGGTTTCGCGCCTCGAGATGAACTCGATGATGAAG
GTCAGTAGATCTTGTATCAG
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