CX295036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOBM (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=atpA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37 Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 ++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + E D+ +RT+A +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ +A+ G Sbjct: 387 VIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLKLVLFFYDETQRALNAG 540
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOBL (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=atpA PE=3 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37 Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 ++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + E D+ +RT+A +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ +A+ G Sbjct: 385 VIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLKLVLFFYDETQRALNAG 538
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOBK (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Okra / Type B1) GN=atpA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37 Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 ++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + E D+ +RT+A +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ +A+ G Sbjct: 387 VIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLKLVLFFYDETQRALNAG 540
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METVS (V-type ATP synthase alpha chain OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=atpA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.798e-37 Identity = 83/176 (47.16%), Postives = 118/176 (67.05%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530 IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + ++++ D+ +R +A +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+ D +C K M++ I+ FY A AV KGA D K++ +K + + Y Sbjct: 386 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYINDIAGWWKKNTGEDWRVLRDEAMGLLQKEAELQEIVQLVGPDALPDRERVILEIARILREDFLQQDAYHEVDSYCSPKKQYNMLKVIMTFYKKALDAVAKGA--DPAKLSAVSVKGDIARMKY 559
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THET8 (V-type ATP synthase alpha chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=atpA PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37 Identity = 79/176 (44.89%), Postives = 114/176 (64.77%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530 IVGAVSPPGGD S+PVT +TL IV FW LD LA R+HFP++NW SYS +++AL+ +Y E D+ +R E+LQRE L EIVQLVG DAL + +++ +E +++RED+L QNA+ D +C K+ +M+ I+ FY A A+++G +D +I + R+G Y Sbjct: 380 IVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSID--EILQLPVLERIGRARY 553
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THEAC (V-type ATP synthase alpha chain OS=Thermoplasma acidophilum GN=atpA PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37 Identity = 73/158 (46.20%), Postives = 107/158 (67.72%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476 ++GAVSPPGGD S+PV+ TL + +VFW LD LA R+HFPS+NWL SYS Y+ L S+Y++ ++ +R +A E+LQRE +L E+ QLVG DA+ E +K L+ A+++RED+L Q+AF D +C K M++ I+ N+A++ GA MD Sbjct: 557 VIGAVSPPGGDISEPVSQNTLRVTRVFWALDAALANRRHFPSINWLNSYSLYTEDLRSWYDKNVSSEWSALRERAMEILQRESELQEVAQLVGYDAMPEKEKSILDVARIIREDFLQQSAFDEIDAYCSLKKQYLMLKAIMEIDTYQNKALDSGATMD 714
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLONN (V-type ATP synthase alpha chain OS=Clostridium novyi (strain NT) GN=atpA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37 Identity = 79/162 (48.77%), Postives = 115/162 (70.99%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKIT 491 +GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y ++ + ++ +++++RT+A +LQ E +L EIV+LVG DAL+E D++ LE AK +REDYL QNAF D + K M++ ++ F + A +A++ AG+ +KIT Sbjct: 386 IGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYLDSIGRWMDRNVSEEWVDLRTRAMTILQEEANLEEIVRLVGIDALSESDRLKLEVAKSIREDYLMQNAFHDVDTYSSLEKQYKMLKLVLSFQDEAERALK--AGVYLEKIT 545
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOBH (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=atpA PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37 Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 ++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + E D+ +R KA +LQ E L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ A +A+ G Sbjct: 385 VIGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDENVASDWTALRIKAMSLLQEEASLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLGKQYKMLKLVLFFYDEAQRALNAG 538
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOB1 (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=atpA PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37 Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 ++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + E D+ +R KA +LQ E L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ A +A+ G Sbjct: 385 VIGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDENVASDWTALRIKAMSLLQEEASLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLGKQYKMLKLVLFFYDEAQRALNAG 538
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPD (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=atpA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.772e-37 Identity = 79/154 (51.30%), Postives = 107/154 (69.48%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467 +GAVSPPGGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y + S+ + + + ++ N T+A +LQRE L EIV+LVG D+L+E D++T+ A+ +REDYL QNAF D F F K M+ NI+ F A++A+ GA Sbjct: 388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541 The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bpback to top |