CX295036

Overview
NameCX295036
Unique NameCX295036
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOBM (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=atpA PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37
Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            ++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D+  +RT+A  +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF   D +    K   M++ ++ FY+   +A+  G
Sbjct:  387 VIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLKLVLFFYDETQRALNAG 540          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOBL (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=atpA PE=3 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37
Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            ++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D+  +RT+A  +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF   D +    K   M++ ++ FY+   +A+  G
Sbjct:  385 VIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLKLVLFFYDETQRALNAG 538          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOBK (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Okra / Type B1) GN=atpA PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37
Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            ++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D+  +RT+A  +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF   D +    K   M++ ++ FY+   +A+  G
Sbjct:  387 VIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLKLVLFFYDETQRALNAG 540          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METVS (V-type ATP synthase alpha chain OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=atpA PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.798e-37
Identity = 83/176 (47.16%), Postives = 118/176 (67.05%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530
            IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +  ++++    D+  +R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ FY  A  AV KGA  D  K++   +K  +  + Y
Sbjct:  386 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYINDIAGWWKKNTGEDWRVLRDEAMGLLQKEAELQEIVQLVGPDALPDRERVILEIARILREDFLQQDAYHEVDSYCSPKKQYNMLKVIMTFYKKALDAVAKGA--DPAKLSAVSVKGDIARMKY 559          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THET8 (V-type ATP synthase alpha chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=atpA PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37
Identity = 79/176 (44.89%), Postives = 114/176 (64.77%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530
            IVGAVSPPGGD S+PVT +TL IV  FW LD  LA R+HFP++NW  SYS +++AL+ +Y E    D+  +R    E+LQRE  L EIVQLVG DAL + +++ +E  +++RED+L QNA+   D +C   K+  +M+ I+ FY  A  A+++G  +D  +I    +  R+G   Y
Sbjct:  380 IVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSID--EILQLPVLERIGRARY 553          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THEAC (V-type ATP synthase alpha chain OS=Thermoplasma acidophilum GN=atpA PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37
Identity = 73/158 (46.20%), Postives = 107/158 (67.72%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSPPGGD S+PV+  TL + +VFW LD  LA R+HFPS+NWL SYS Y+  L S+Y++    ++  +R +A E+LQRE +L E+ QLVG DA+ E +K  L+ A+++RED+L Q+AF   D +C   K   M++ I+      N+A++ GA MD
Sbjct:  557 VIGAVSPPGGDISEPVSQNTLRVTRVFWALDAALANRRHFPSINWLNSYSLYTEDLRSWYDKNVSSEWSALRERAMEILQRESELQEVAQLVGYDAMPEKEKSILDVARIIREDFLQQSAFDEIDAYCSLKKQYLMLKAIMEIDTYQNKALDSGATMD 714          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLONN (V-type ATP synthase alpha chain OS=Clostridium novyi (strain NT) GN=atpA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37
Identity = 79/162 (48.77%), Postives = 115/162 (70.99%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKIT 491
            +GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y  ++  + ++    +++++RT+A  +LQ E +L EIV+LVG DAL+E D++ LE AK +REDYL QNAF   D +    K   M++ ++ F + A +A++  AG+  +KIT
Sbjct:  386 IGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYLDSIGRWMDRNVSEEWVDLRTRAMTILQEEANLEEIVRLVGIDALSESDRLKLEVAKSIREDYLMQNAFHDVDTYSSLEKQYKMLKLVLSFQDEAERALK--AGVYLEKIT 545          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOBH (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=atpA PE=3 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37
Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            ++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D+  +R KA  +LQ E  L EIV+LVG DAL+E D++ LE AK LREDYL QNAF   D +    K   M++ ++ FY+ A +A+  G
Sbjct:  385 VIGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDENVASDWTALRIKAMSLLQEEASLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLGKQYKMLKLVLFFYDEAQRALNAG 538          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOB1 (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=atpA PE=3 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37
Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            ++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D+  +R KA  +LQ E  L EIV+LVG DAL+E D++ LE AK LREDYL QNAF   D +    K   M++ ++ FY+ A +A+  G
Sbjct:  385 VIGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDENVASDWTALRIKAMSLLQEEASLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLGKQYKMLKLVLFFYDEAQRALNAG 538          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPD (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=atpA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.772e-37
Identity = 79/154 (51.30%), Postives = 107/154 (69.48%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + + + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
VATA_CLOBM2.142e-3750.65V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_CLOBL2.142e-3750.65V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_CLOBK2.142e-3750.65V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_METVS2.798e-3747.16V-type ATP synthase alpha chain OS=Methanococcus v... [more]
VATA_THET83.654e-3744.89V-type ATP synthase alpha chain OS=Thermus thermop... [more]
VATA_THEAC3.654e-3746.20V-type ATP synthase alpha chain OS=Thermoplasma ac... [more]
VATA_CLONN3.654e-3748.77V-type ATP synthase alpha chain OS=Clostridium nov... [more]
VATA_CLOBH3.654e-3751.30V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_CLOB13.654e-3751.30V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_STRPD4.772e-3751.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC05065H07SK DroRLeaf1 Citrus clementina cDNA clone C05065H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bp
GAGGCATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCT
GTAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAA
GAAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTT
ACTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCG
GATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGA
TGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAG
GAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTT
GCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTC
TGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCAATCAGG
CCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACCCTT
ATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAAGTT
TGAGGACCCACAGAAGAGAACAGCTCTGGTTGCTAAATTCAAAAGCTGCA
TGAGGATCTGACCGCTGGTTTCGCGCCTCGAGATGAACTCGATGATGAAG
GTCAGTAGATCTTGTATCAG
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