CX295040

Overview
NameCX295040
Unique NameCX295040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_MYCLE (60 kDa chaperonin 2 OS=Mycobacterium leprae GN=groL2 PE=3 SV=3)

HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57
Identity = 125/236 (52.97%), Postives = 160/236 (67.80%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L D+AILTG  VI +EVGL L+     +LG A KVV+TKD TTIV      DA++ RVAQIRT IEN++ DY+REKL ER+AKL+GGVAVI+ GA TE ELKE+K R+EDA+   KAA           TLL+ +  +D +K T D   E  GA+IVK AL  PLK IA N+G+   VV+EKV +  +  +G NAATG YEDL+ AG+ DP KV R  L++A+S+
Sbjct:  276 APGFGDRRKAMLQDMAILTGAQVISEEVGLTLENTDLSLLGKARKVVMTKDETTIVEGAGDTDAIAGRVAQIRTEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPALDKLKLTGD---EATGANIVKVALEAPLKQIAFNSGMEPGVVAEKVRNL-SVGHGLNAATGEYEDLLKAGVADPVKVTRSALQNAASI 507          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_MESSB (60 kDa chaperonin 2 OS=Mesorhizobium sp. (strain BNC1) GN=groL2 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57
Identity = 115/236 (48.73%), Postives = 159/236 (67.37%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIAILTGGT I +++G+ L+ V  E+LG A KVV+ K+ TTIV    ++D +  RV QI+  IE    DY+REKL ER+AKL+GGVAVI+VG  TE E+KE+K RV+DA++AT+AA            LLR +  +D +  T +N+++KVG  IV+RA+  P++ IA+NAG  GS++  +V    +  YG+NA TG Y DL   G+IDP KVVR  L+ A+SV
Sbjct:  278 APGFGDRRKAMLQDIAILTGGTAISEDLGIKLENVTLEMLGRAKKVVIEKENTTIVDGAGSKDEIQGRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGLLPGGGVALLRAAKALDNV--TGENEDQKVGISIVRRAIEAPIRQIAENAGAEGSIIVGRVREKPDFGYGWNAQTGEYGDLYQMGVIDPVKVVRAALQDAASV 511          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_SHELP (60 kDa chaperonin OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=groL PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.082e-56
Identity = 120/236 (50.85%), Postives = 159/236 (67.37%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIAILTGGTVI +E+GL L+K   E LG A +VV+TKD TTI+     Q+ +S RVAQI+   E +  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R++SK+  +   + N+++K G  I  RA+  PL+ IA NAG   SVV+  V +   + YGYNA +  Y D++  GI+DPTKV R  L+ ASS+
Sbjct:  278 APGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGEQEQISARVAQIKIQAEESTSDYDREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIGEL--DVANEDQKHGVTIALRAMEAPLRQIATNAGEEASVVANNVKNGSGN-YGYNAGSDVYGDMLEMGILDPTKVTRSALQFASSI 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_RHOCS (60 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=groL PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.082e-56
Identity = 113/236 (47.88%), Postives = 160/236 (67.80%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L+D+AILTGG V+ +++G+ L+ V  E+LG A KVV+TKD TTIV    +++ +  R+ QI+  IE    DY+REKL ER+AKL+GGVAVI+VG  TE E+KE+K RV+DA++AT+AA            LL  +  +D  K T  N+++K G DIV++AL  P++ IA+NAG +GSV+  K+L      +G+NA  G Y D+   G+IDPTKVVR  L+ A+SV
Sbjct:  278 APGFGDRRKAMLEDMAILTGGQVVSEDLGIKLENVSLEMLGQAKKVVITKDNTTIVDGAGSKEDIQARIVQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVAGGGVALLYATKALD--KLTAVNEDQKFGIDIVRKALQAPVRQIAQNAGFDGSVIVGKLLEKGETNFGFNAQAGEYGDMFKFGVIDPTKVVRAALQDAASV 511          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_KLEPL (60 kDa chaperonin (Fragment) OS=Klebsiella planticola GN=groL PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.082e-56
Identity = 120/236 (50.85%), Postives = 158/236 (66.95%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIA LTGGTVI +E+G+ L+K   E LG A +VV+ KDTTTI+     + A+  RV QIR  IE A  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R++SK+  +K    N+++ VG  +  RA+  PL+ I  N G   SVV+  V S D + YGYNAAT  Y +++  GI+DPTKV R  L++A+SV
Sbjct:  278 APGFGDRRKAMLQDIATLTGGTVISEEIGMELEKSTLEDLGQAKRVVINKDTTTIIDGVGEESAIQGRVTQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIAELKG--QNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKSGDGN-YGYNAATEEYGNMIDMGILDPTKVTRSALQYAASV 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_IDILO (60 kDa chaperonin OS=Idiomarina loihiensis GN=groL PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.082e-56
Identity = 117/236 (49.58%), Postives = 158/236 (66.95%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIA+LTGGTV+ +E+G+ L+K   E LG A +VV+TKD TT+V       A+  RV QI+  +E+   DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R +SK+  ++   DN+E+ VG  +  RA+  PL+ IA NAG  GSVV+  V + + + YGYNA    Y D++  GI+DPTKV R  L+ A+SV
Sbjct:  278 APGFGDRRKAMLQDIAVLTGGTVVSEEIGMELEKTQLEDLGTAKRVVITKDNTTVVDGNGDDTAIDGRVNQIKQQMEDTTSDYDREKLQERLAKLAGGVAVIKVGAATEMEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRAASKLAELRG--DNEEQNVGIRLALRAMEAPLRQIAMNAGAEGSVVANNVRAGEGN-YGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASV 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_CITK8 (60 kDa chaperonin OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=groL PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.082e-56
Identity = 120/236 (50.85%), Postives = 158/236 (66.95%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIA LTGGTVI +E+G+ L+K   E LG A +VV+ KDTTTI+     + A+  RV QIR  IE A  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R++SK+  +K    N+++ VG  +  RA+  PL+ I  N G   SVV+  V S D + YGYNAAT  Y +++  GI+DPTKV R  L++A+SV
Sbjct:  278 APGFGDRRKAMLQDIATLTGGTVISEEIGMELEKSTLEDLGQAKRVVINKDTTTIIDGVGEESAIQGRVTQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIAELKG--QNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKSGDGN-YGYNAATEEYGNMIDMGILDPTKVTRSALQYAASV 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_SORC5 (60 kDa chaperonin 2 OS=Sorangium cellulosum (strain So ce56) GN=groL2 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.082e-56
Identity = 118/236 (50.00%), Postives = 159/236 (67.37%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+ + L DIA LT G VI +E+GL L+ V    LG A  V++ KD TTIVG    +D +  R  +IR  IEN   DY+REKL ER+AKL GGVAV++VGA TETE+KEKK RVEDAL+AT+AA            L+R  S ++ +K    NDE++ G +I++RA+  PL+ I+ NAG  GS+V +KV    +  YGYNAA+G+Y +L+  G+IDP KVVR  L++A+SV
Sbjct:  278 APGFGDRRKEMLKDIATLTDGQVIAEELGLKLENVTISDLGRAKTVIIDKDNTTIVGGQGKKDKIKARQQEIRAQIENTTSDYDREKLQERLAKLVGGVAVVKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRAQSSLEKLKV---NDEQRFGVNIIRRAIEEPLRQISANAGEEGSIVVQKVRDGKD-SYGYNAASGDYGNLLEMGVIDPVKVVRSALQNAASV 509          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_RHOP2 (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL2 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.082e-56
Identity = 114/236 (48.31%), Postives = 160/236 (67.80%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIAILTGG  I +++G+ ++ V  ++LG A KV++ K+ TTIV     +  +  RVAQI+  IE    DY+REKL ER+AKL+GGVAVI+VG  TE E+KE+K RV+DA++AT+AA            LLR S ++  IK    ND++K G +IV++AL  P + IA NAG +GSV+  KVL  D + YG+++ TG Y D++  GIIDPTKVVR  +++A+SV
Sbjct:  278 APGFGDRRKAMLQDIAILTGGQAISEDLGIKMENVTLQMLGRAKKVMIDKENTTIVNGAGKKVDIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIKTA--NDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKVLEKDQYNYGFDSQTGEYGDMVKKGIIDPTKVVRAAIQNAASV 511          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_ANADF (60 kDa chaperonin 2 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL2 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.082e-56
Identity = 124/237 (52.32%), Postives = 160/237 (67.51%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDA-VSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L+DIAILTGG +I +E+GL L++V  + LG A ++ + KD TTIV DG+ Q A +  RV  IR  IE    DY+REKL ER+AKL GGVAVI VGA TETE+KEKK RVEDAL+AT+AA             LR    ++ +K    ++ EK G DIV+RAL  PL+ IA N G   S+V  KV  S +  +G+NAATG+YEDL+ +G+IDPTKV R  L++ASSV
Sbjct:  278 APGFGDRRKAMLEDIAILTGGRMIAEELGLKLEQVSLKDLGRAKRISIDKDNTTIV-DGAGQKADIEARVKTIRAQIEETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRAVKALEGVKV---SEGEKFGLDIVRRALEEPLRQIAGNGGYEASIVVNKVKESKDTNFGFNAATGDYEDLVKSGVIDPTKVSRSALQNASSV 510          
The following BLAST results are available for this feature:
BLAST of CX295040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_MYCLE8.281e-5752.9760 kDa chaperonin 2 OS=Mycobacterium leprae GN=gro... [more]
CH602_MESSB8.281e-5748.7360 kDa chaperonin 2 OS=Mesorhizobium sp. (strain B... [more]
CH60_SHELP1.082e-5650.8560 kDa chaperonin OS=Shewanella loihica (strain AT... [more]
CH60_RHOCS1.082e-5647.8860 kDa chaperonin OS=Rhodospirillum centenum (stra... [more]
CH60_KLEPL1.082e-5650.8560 kDa chaperonin (Fragment) OS=Klebsiella plantic... [more]
CH60_IDILO1.082e-5649.5860 kDa chaperonin OS=Idiomarina loihiensis GN=groL... [more]
CH60_CITK81.082e-5650.8560 kDa chaperonin OS=Citrobacter koseri (strain AT... [more]
CH602_SORC51.082e-5650.0060 kDa chaperonin 2 OS=Sorangium cellulosum (strai... [more]
CH602_RHOP21.082e-5648.3160 kDa chaperonin 2 OS=Rhodopseudomonas palustris ... [more]
CH602_ANADF1.082e-5652.3260 kDa chaperonin 2 OS=Anaeromyxobacter sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC05065H11SK DroRLeaf1 Citrus clementina cDNA clone C05065H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295040 ID=CX295040; Name=CX295040; organism=Citrus clementina; type=EST; length=728bp
GAGGGATTGCTGCTCTTAAGCTCCTGGTTTTGGAGAGCGCAAGAGCCAGT
ACCTTGACGACATTGCTATTTTGACTGGAGGAACTGTAATCAGAGATGAG
GTGGGACTTGCCTTGGACAAAGTTGGCAAGGAGGTCCTAGGTAATGCTTC
TAAAGTTGTGCTCACAAAGGATACCACCACCATTGTGGGGGATGGCAGCA
CCCAGGATGCAGTGAGCAAACGAGTGGCGCAAATCAGAACTCTAATTGAG
AACGCTGAGCAAGACTATGAAAGGGAGAAGCTTAATGAAAGAATTGCTAA
ACTGTCAGGTGGTGTTGCTGTCATACAGGTTGGAGCTCAAACTGAGACAG
AGCTTAAAGAGAAGAAGTTGAGAGTCGAAGATGCTCTTAATGCAACAAAG
GCTGCAGTTGAGGAAGGTATCGTAGTTGGTGGCGGATGTACTCTACTGAG
ACTCTCATCTAAGGTGGATGCCATTAAGGAAACCCTTGATAATGATGAAG
AAAAGGTTGGAGCAGATATTGTTAAAAGAGCTCTGTGCTACCCACTGAAA
TTAATTGCCAAAAATGCCGGTGTTAATGGAAGTGTGGTCAGCGAGAAGGT
GCTTTCAAGTGACAATCATAAATATGGATACAATGCTGCAACTGGAAACT
ACGAAGATCTAATGGCTGCAGGAATTATTGATCCTACCAAGGTGGTTAGA
TGTTGCTTGGAGCATGCTTCCTCGGTGG
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