CX295040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_SYNY3 (60 kDa chaperonin 2 OS=Synechocystis sp. (strain PCC 6803) GN=groL2 PE=1 SV=4) HSP 1 Score: 234.187 bits (596), Expect = 5.542e-61 Identity = 125/238 (52.52%), Postives = 165/238 (69.33%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVG--DGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 AP FG+R+ L DIAILTGG+VI +++GL+LD V + LG A K L KD T +V D V +R+ Q+R ++ DY++EK+ ERIAKL+GGVAVI+VGA TETELK++KLR+EDALNATKAA TL+RL+ K+++ K L NDEE+V ADI+ +AL PL +A NAGV GSV+ EKV + ++ GYN TG EDL+AAGIIDP KVVR L++A+S+ Sbjct: 276 APAFGDRRKAVLQDIAILTGGSVISEDIGLSLDTVSLDQLGQAVKATLEKDNTILVAGADKRASAGVKERIEQLRKEYAASDSDYDKEKIQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIRLAGKIESFKAQLSNDEERVAADIIAKALEAPLHQLASNAGVEGSVIVEKVKEATGNQ-GYNVITGKIEDLIAAGIIDPAKVVRSALQNAASI 512
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_SYNS3 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9311) GN=groL1 PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.542e-61 Identity = 125/236 (52.97%), Postives = 170/236 (72.03%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 AP FGER+ L DIA+LTGG VI ++ + LDKV E LG A ++ ++KD+TTIV +++AVS RVA I+ ++N + +Y++EKLNERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TLL +S+++DA+ L+ D +K G +IV+RAL PL+ IA+NAG NG VV ++V +S G+NA TGN+EDLM AGI+D +KVVR L+ A S+ Sbjct: 276 APSFGERRKAALADIAVLTGGQVISEDRAMTLDKVTMEDLGRARRITISKDSTTIVASDDSKEAVSARVASIKRELDNTDSEYDQEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLHISAELDALTSGLEGD-QKTGVEIVQRALSAPLRQIAENAGSNGDVVVDRVRNSGE---GFNALTGNFEDLMNAGILDASKVVRLALQDAVSI 507
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_THEVL (60 kDa chaperonin 2 OS=Thermosynechococcus vulcanus GN=groL2 PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.235e-60 Identity = 128/236 (54.24%), Postives = 164/236 (69.49%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 AP FGER+ L DIAILTGG VI +EVGL L+ V +LG AS V +TKDTT +V + + + KRV Q++ + + +Y++EKL ERIAKL GGVAVI+VGA TETELK++KLR+EDALNATKAA TLL L+S++DA+ +L + EE+ GA IV AL P+ IA NAG G+VV E V + D YG+NAATG YEDL++AGIIDP KVVR L++A S+ Sbjct: 276 APAFGERRKAMLQDIAILTGGQVISEEVGLTLEDVELTMLGEASSVTVTKDTTILVSEKGNKADIQKRVEQLKQQLAETDSEYDKEKLQERIAKLVGGVAVIKVGAATETELKDRKLRLEDALNATKAAVAEGIVPGGGVTLLHLASRIDALLPSL-SPEEQTGARIVASALAAPVAQIADNAGAEGAVVVENVRAGD-FNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSI 509
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_THEEB (60 kDa chaperonin 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=groL2 PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.235e-60 Identity = 128/236 (54.24%), Postives = 164/236 (69.49%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 AP FGER+ L DIAILTGG VI +EVGL L+ V +LG AS V +TKDTT +V + + + KRV Q++ + + +Y++EKL ERIAKL GGVAVI+VGA TETELK++KLR+EDALNATKAA TLL L+S++DA+ +L + EE+ GA IV AL P+ IA NAG G+VV E V + D YG+NAATG YEDL++AGIIDP KVVR L++A S+ Sbjct: 276 APAFGERRKAMLQDIAILTGGQVISEEVGLTLEDVELTMLGEASSVTVTKDTTILVSEKGNKADIQKRVEQLKQQLAETDSEYDKEKLQERIAKLVGGVAVIKVGAATETELKDRKLRLEDALNATKAAVAEGIVPGGGVTLLHLASRIDALLPSL-SPEEQTGARIVASALAAPVAQIADNAGAEGAVVVENVRAGD-FNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSI 509
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_HYPNA (60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444) GN=groL PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.592e-60 Identity = 119/236 (50.42%), Postives = 163/236 (69.07%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L D+A+LTGG VI +++G+ L+ VG E+LG A +V + KD TTIV G + + RV+QIR I++ DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DALNAT+AA LLR S +D + ND+EK G DIV++AL P++ IA+NAGV GSVV +L++ + YG+NA T Y DL+A G+IDP KVVR L++A+S+ Sbjct: 278 APGFGDRRKAMLQDLAVLTGGQVISEDLGIKLENVGMEMLGKAKRVSIDKDNTTIVDGGGKKKEIEARVSQIRKQIDDTSSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALNATRAAVEEGIVPGGGVALLRSSKNIDVVGL---NDDEKAGIDIVRKALEAPIRQIAENAGVEGSVVVNTILNNKSRSYGFNAQTEEYGDLVAMGVIDPVKVVRSALQNAASI 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_AQUAE (60 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.692e-60 Identity = 123/243 (50.62%), Postives = 166/243 (68.31%), Query Frame = 2 Query: 8 CCS*APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 C APGFG+R+ YL DIA+LTGG I +++G+ L+ V ++LG A KVV+ K+ TTI+G + + R+ QI+ I+ DY+REKL ER+AKLSGGVA+I+VGA TE ELKEKK RVEDA++ATKAA L+R S ++ +K DN ++++G DI+K+A+ PLK IA NAG +GSVV EKV+ K +G+NAATG Y D+ AGIIDPTKVVR +E+A+SV Sbjct: 274 CAVKAPGFGQRRKDYLGDIAVLTGGQAITEDLGIKLESVTLDMLGQAEKVVVDKEHTTIIGGKGDPEQIKARIEQIKRQIQETTSDYDREKLQERLAKLSGGVAIIRVGAATEAELKEKKYRVEDAVHATKAAVEEGIVPGGGVALVRASEALEDLKG--DNHDQQLGIDIIKKAVRTPLKQIAYNAGYDGSVVLEKVIELGKEKGVSWGFNAATGEYVDMYEAGIIDPTKVVRTAIENAASV 514
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_THELT (60 kDa chaperonin OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=groL PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.328e-59 Identity = 123/240 (51.25%), Postives = 163/240 (67.92%), Query Frame = 2 Query: 8 CCS*APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 C APGFG+R+ L DIAILTGGTVI DE+G+ L+ V E LG A V + KD T I+G + + KR+AQI++ IE +YE+E L ER+AKL+GGVAVI+VGA TETELKEKK R+EDAL+AT+AA TL+R V+ + + LD D EKVGA IV +AL P++ IA+NAG +G+V+ EK+L+S YG++A G Y D+ AGIIDP KV R L++A+S+ Sbjct: 272 CAVKAPGFGDRRKAMLQDIAILTGGTVISDELGINLEDVAIEDLGRADIVRVKKDDTIIIGGKGNPEEIKKRIAQIKSQIEQTTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLIRSRKAVEDVLKELDGD-EKVGAMIVYKALEAPIRQIAENAGYDGAVIIEKILASKEESYGFDALKGEYTDMFKAGIIDPAKVTRSALQNAASI 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_ROSDO (60 kDa chaperonin 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=groL2 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.187e-59 Identity = 119/236 (50.42%), Postives = 164/236 (69.49%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGG VI +++G+ L+ V ++LG+A K+ +TKD TTIV + + RVAQIRT IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DALNAT+AA L++ ++ + T DN+++ VG IV++AL PL+ IA+NAGV+GSVV+ K+ SD+ K+G+NA T Y D+ A G+IDP KVVR L+ A+S+ Sbjct: 278 APGFGDRRKAMLQDIAILTGGQVISEDLGMKLESVTMDMLGSAKKIQITKDETTIVDGAGEKAEIEARVAQIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQAGKHLEGL--TGDNNDQNVGISIVRKALEAPLRQIAENAGVDGSVVAGKIRESDDLKFGFNAQTEEYGDMFAFGVIDPAKVVRTALQDAASI 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_SYNPW (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH7803) GN=groL1 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.187e-59 Identity = 125/236 (52.97%), Postives = 164/236 (69.49%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 AP FGER+ L DIAILTGGTVI ++ + LDKV E LG A ++ ++K+ TTIV ++DAV++RVA IR +EN++ +Y+REKLNERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TL++L+ +D + L D ++ G +IV RAL PL+ IA NAG NG VV E+V S G+NA TG YE+L+ AGI+D KVVR L+ A S+ Sbjct: 276 APSFGERRKAALADIAILTGGTVISEDRAMTLDKVTLEDLGRARRITISKEETTIVASEDSRDAVAERVASIRRELENSDSEYDREKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLIQLAGSLDGLANQLHGD-QRTGVEIVHRALSAPLRQIAINAGANGDVVVEQVQRSGQ---GFNALTGGYENLLEAGILDAAKVVRLGLQDAVSI 507
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_SULSY (60 kDa chaperonin OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=groL PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.775e-59 Identity = 122/242 (50.41%), Postives = 161/242 (66.53%), Query Frame = 2 Query: 2 RDCCS*APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 R C APGFGER+ L DIAILTGGT I +++G+ L+ V ++LG A KVV+ KD TTI+G + + R+ QI+ IE +Y++EKL ER+AKL+GGVA+I+VGA TE ELKEKK RV+DA++ATKAA + R S + IKE +N ++ G IVK A PLK IA NAG GSV+ EK+ DN YG++AATG Y D++ AGIIDPTKVVR L++A+S+ Sbjct: 272 RVCAVKAPGFGERRKAMLQDIAILTGGTAITEDLGIKLESVDLDMLGKADKVVVDKDNTTIIGGKGNPEDIKARIEQIKKQIETTTSEYDKEKLQERLAKLAGGVAIIKVGAATEAELKEKKDRVDDAVHATKAAVEEGIVPGGGIAIFRASRALCNIKE--ENTDKAWGIKIVKNACKVPLKQIAYNAGFEGSVIIEKIKDVDNVNYGFDAATGEYVDMVEAGIIDPTKVVRTALQNAASI 511 The following BLAST results are available for this feature:
BLAST of CX295040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295040 ID=CX295040; Name=CX295040; organism=Citrus clementina; type=EST; length=728bpback to top |