CX295040

Overview
NameCX295040
Unique NameCX295040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_STRMU (60 kDa chaperonin OS=Streptococcus mutans GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54
Identity = 118/236 (50.00%), Postives = 160/236 (67.80%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L+DIA+LTGGTVI +++GL L     + LG A++V + KD+T IV     ++AV+ RV  I++ IE A  D++REKL ER+AKLSGGVAVI+VGA TETELKE KLR+EDALNAT+AA            L+ +  KV A+  T   D+   G ++V RAL  P++ IAKNAG  GSV+ +K L + +   G+NAA G + D++ AGIIDP KV R  L++A+SV
Sbjct:  276 APGFGDRRKAMLEDIAVLTGGTVITEDLGLELKDTTIDALGQAARVTVDKDSTVIVEGSGGKEAVANRVNLIKSQIETATSDFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVAGGGTALINVIEKVAALDLT---DDAATGRNLVLRALEEPVRQIAKNAGYEGSVIIDK-LKNSSAGTGFNAANGEWVDMIDAGIIDPVKVTRSALQNAASV 507          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_STAAB (60 kDa chaperonin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54
Identity = 113/236 (47.88%), Postives = 162/236 (68.64%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L+D+AILTG  VI D++GL L     ++LG ASKV +TKD TT+V     ++++  RV+Q+++ IE  E D++REKL ER+AKL+GGVAVI+VGA +ETELKE+KLR+EDALN+T+AA            L+ +  KV  I+   D +    G +IV +AL  P++ IA+NAG+ GSV+ E+ L +     G+NAAT  + +++ AGI+DPTKV R  L+HA+SV
Sbjct:  276 APGFGDRRKAMLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIEAEGDIE---TGVNIVLKALTAPVRQIAENAGLEGSVIVER-LKNAEPGVGFNAATDEWVNMLEAGIVDPTKVTRSALQHAASV 507          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_SODGL (60 kDa chaperonin OS=Sodalis glossinidius GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54
Identity = 112/236 (47.46%), Postives = 159/236 (67.37%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIAILT GTVI +E+GL L+K   E +G A +VV+TKDTTTI+     +  +  RV QI    + A  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R+++++  ++   DN+++ VG  + +RA+  PL+ I  NAG   SV++ KV + + +  GYNAAT  Y +++  GI+DPTKV R  L++A+S+
Sbjct:  278 APGFGDRRKAMLRDIAILTAGTVISEEIGLELEKATLEDMGQAKRVVITKDTTTIIDGEGDKALIDSRVTQINQQRDEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVANRIAELRG--DNEDQNVGIKVARRAMEAPLRQIVANAGEEPSVIANKVKAGEGNT-GYNAATEEYGNMIDMGILDPTKVTRSALQYAASI 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_SCAIO (60 kDa chaperonin OS=Scardovia inopinata GN=groL PE=3 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54
Identity = 117/236 (49.58%), Postives = 159/236 (67.37%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L D+AILTG  V+ DE+GL LD +   V G+ASKV+++KD TTIV    +++ V+ RVAQIR+ IE+++ DY+REKL ER+AKL+GGVAVI+VGA TE E KE+K R+EDA+   KAA            L++ ++  D  K      +E  GA IV RA+  PLK IA+NAG +G VV +KV +      G NAATG YEDL++AG+ DP KV R  L++A+S+
Sbjct:  276 APGFGDRRKAMLQDMAILTGAQVVSDELGLKLDSIDDTVFGHASKVIVSKDETTIVSGAGSKEDVAARVAQIRSEIEDSDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQAAA--DVQKNVKLEGDEATGAGIVFRAIEAPLKQIAQNAGFSGEVVIDKVRTLPAGS-GLNAATGEYEDLLSAGVTDPVKVTRSALQNAASI 508          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_SACD2 (60 kDa chaperonin OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54
Identity = 115/236 (48.73%), Postives = 155/236 (65.68%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIAILTGGTVI +EVGL L+    E LG+A +V +TK+ +TIV        +  RVAQIR  IE    DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R ++ +  +K   DN+++  G  I  RAL  PL+ I  NAG   SVV++KV + + + +G+NAA+G Y D++  GI+DP KV R  ++ A S+
Sbjct:  277 APGFGDRRKAMLQDIAILTGGTVISEEVGLDLESATLEHLGSAKRVTMTKENSTIVDGAGVAADIESRVAQIRAQIEETSSDYDREKLQERVAKLAGGVAVIKVGAMTEVEMKEKKARVEDALHATRAAVEEGVVPGGGTALIRAAAAIADLKG--DNEDQNAGIGIAIRALEAPLRQIVSNAGGEASVVADKVKNGEGN-FGFNAASGEYGDMLEFGILDPAKVSRTAIQAAGSI 509          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_PEDPA (60 kDa chaperonin OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54
Identity = 117/236 (49.58%), Postives = 158/236 (66.95%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+ + L+DIAILTGGTVI D++GL L  V  E LG ++KV +TKD TTIV    +Q+ +++RV  I+  I     D+++EKL ER+AKLSGGVAVI+VGA TETELKEKK R+EDALNAT+AA            L  + S ++ ++      +E  G +IV+RAL  P++ IA+NAG  GSV+  K L       GYNAA   + D++ AGI+DPTKV R  L++A+SV
Sbjct:  276 APGFGDRRKEQLEDIAILTGGTVITDDLGLNLKDVTIEQLGQSNKVTVTKDDTTIVEGAGSQEQIAERVGIIKQQISETTSDFDKEKLQERLAKLSGGVAVIRVGAATETELKEKKYRIEDALNATRAAVEEGFVPGGGTALANVISDLEDVEA---EGDEATGVNIVRRALEEPVRQIAENAGEEGSVIVTK-LKGQKPGVGYNAANDEWVDMVEAGIVDPTKVTRSALQNAASV 507          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_LACSS (60 kDa chaperonin OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54
Identity = 117/236 (49.58%), Postives = 160/236 (67.80%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+ + L+DIA LTG TVI  ++GL L +   + LG A KV +TKD TTIV    ++ A+++RV  I+  I     D++REKL ER+AKL+GGVAVI+VGA TETELKE+K R+EDALNAT+AA            L+ +   V A++E     + + G +IV RAL  P++ IA NAG+ GSV+ EKV  S   + GYNAA GN+E+++ AGI+DPTKV R  L++A+SV
Sbjct:  276 APGFGDRRKEQLEDIATLTGATVITSDLGLELKETTIDQLGTAGKVTVTKDDTTIVEGAGSKSAIAERVENIKKQIAETTSDFDREKLQERLAKLAGGVAVIKVGAATETELKEQKYRIEDALNATRAAVEEGYVAGGGTALIDVIESVAALEE---EGDVQTGINIVLRALEEPVRQIATNAGLEGSVIVEKV-KSQPVEVGYNAANGNWENMIEAGILDPTKVTRSALQNAASV 507          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_JANSC (60 kDa chaperonin OS=Jannaschia sp. (strain CCS1) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54
Identity = 112/236 (47.46%), Postives = 159/236 (67.37%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIAILTGG VI +++G+ L+ V  ++LG A ++ ++KD TTIV     +  +  RVAQIR  IE +  DY+REKL ER+AKL+GGVAVI+VG  +E E+KE+K RV+DALNAT+AA            L++    +  ++   +N ++  G  IV+RAL  PL+ IA+N+GV+GSVV+ K+  SD++ +G+NA T  Y DL   G+IDP KVVR  L+ A+SV
Sbjct:  277 APGFGDRRKAMLQDIAILTGGQVIAEDLGMKLESVTMDMLGTAKRLTISKDETTIVDGAGNKPEIEARVAQIRQQIEESTSDYDREKLQERVAKLAGGVAVIKVGGMSEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGGKSLAGLEG--ENADQNAGIAIVRRALEAPLRQIAENSGVDGSVVAGKIRESDDNAFGFNAQTEEYGDLFKFGVIDPAKVVRTALQDAASV 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_HELPH (60 kDa chaperonin OS=Helicobacter pylori (strain HPAG1) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54
Identity = 119/236 (50.42%), Postives = 155/236 (65.68%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+ + L DIAILTGG VI +E+GL+L+    E LG A ++V+ KD TTIV      D V  RVAQI+T I +   DY++EKL ER+AKLSGGVAVI+VGA +E E+KEKK RV+DAL+ATKAA            L+R + KV        +D+EKVG +I+ RA+  PL  IA NAG +G VV  +V   + H +G+NA+ G Y D+   GIIDP KV R  L++A SV
Sbjct:  277 APGFGDRRKEMLKDIAILTGGQVISEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAQKVHLNL----HDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGH-FGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSV 507          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_DEIGD (60 kDa chaperonin OS=Deinococcus geothermalis (strain DSM 11300) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.945e-54
Identity = 115/237 (48.52%), Postives = 158/237 (66.67%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNY-EDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+ + L DIA +TGG V+ +++G  L+ V  ++LG A ++ +TKD TTI+     Q  +  RV  I+  +E  + DY REKL ER+AKL+GGVAVI+VGA TETELKEKK R EDAL+  ++A           TLLR+   V  + E+L+ D E  GA I+ RAL  P + IA NAG  GSV+   VL+SD  +YGYNAATG + +D++AAGI+DP KV R  L++A+S+
Sbjct:  276 APGFGDRRKEMLRDIAAVTGGQVVSEDLGHRLENVTLDMLGRAKRIRITKDETTIIDGMGNQAEIDARVNAIKAELETTDSDYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRYEDALSTARSAVEEGIVAGGGTTLLRVIPAVKQLAESLEGD-EATGARILVRALEEPARQIAANAGDEGSVIVNAVLNSDKPRYGYNAATGEFVDDMVAAGIVDPAKVTRTALQNAASI 511          
The following BLAST results are available for this feature:
BLAST of CX295040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_STRMU2.945e-5450.0060 kDa chaperonin OS=Streptococcus mutans GN=groL ... [more]
CH60_STAAB2.945e-5447.8860 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_SODGL2.945e-5447.4660 kDa chaperonin OS=Sodalis glossinidius GN=groL ... [more]
CH60_SCAIO2.945e-5449.5860 kDa chaperonin OS=Scardovia inopinata GN=groL P... [more]
CH60_SACD22.945e-5448.7360 kDa chaperonin OS=Saccharophagus degradans (str... [more]
CH60_PEDPA2.945e-5449.5860 kDa chaperonin OS=Pediococcus pentosaceus (stra... [more]
CH60_LACSS2.945e-5449.5860 kDa chaperonin OS=Lactobacillus sakei subsp. sa... [more]
CH60_JANSC2.945e-5447.4660 kDa chaperonin OS=Jannaschia sp. (strain CCS1) ... [more]
CH60_HELPH2.945e-5450.4260 kDa chaperonin OS=Helicobacter pylori (strain H... [more]
CH60_DEIGD2.945e-5448.5260 kDa chaperonin OS=Deinococcus geothermalis (str... [more]

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Properties
Property NameValue
Genbank descriptionC05065H11SK DroRLeaf1 Citrus clementina cDNA clone C05065H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295040 ID=CX295040; Name=CX295040; organism=Citrus clementina; type=EST; length=728bp
GAGGGATTGCTGCTCTTAAGCTCCTGGTTTTGGAGAGCGCAAGAGCCAGT
ACCTTGACGACATTGCTATTTTGACTGGAGGAACTGTAATCAGAGATGAG
GTGGGACTTGCCTTGGACAAAGTTGGCAAGGAGGTCCTAGGTAATGCTTC
TAAAGTTGTGCTCACAAAGGATACCACCACCATTGTGGGGGATGGCAGCA
CCCAGGATGCAGTGAGCAAACGAGTGGCGCAAATCAGAACTCTAATTGAG
AACGCTGAGCAAGACTATGAAAGGGAGAAGCTTAATGAAAGAATTGCTAA
ACTGTCAGGTGGTGTTGCTGTCATACAGGTTGGAGCTCAAACTGAGACAG
AGCTTAAAGAGAAGAAGTTGAGAGTCGAAGATGCTCTTAATGCAACAAAG
GCTGCAGTTGAGGAAGGTATCGTAGTTGGTGGCGGATGTACTCTACTGAG
ACTCTCATCTAAGGTGGATGCCATTAAGGAAACCCTTGATAATGATGAAG
AAAAGGTTGGAGCAGATATTGTTAAAAGAGCTCTGTGCTACCCACTGAAA
TTAATTGCCAAAAATGCCGGTGTTAATGGAAGTGTGGTCAGCGAGAAGGT
GCTTTCAAGTGACAATCATAAATATGGATACAATGCTGCAACTGGAAACT
ACGAAGATCTAATGGCTGCAGGAATTATTGATCCTACCAAGGTGGTTAGA
TGTTGCTTGGAGCATGCTTCCTCGGTGG
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