CX295040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_SPHAL (60 kDa chaperonin 2 OS=Sphingopyxis alaskensis GN=groL2 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.391e-58 Identity = 118/236 (50.00%), Postives = 161/236 (68.22%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGG V+ +++G+ L+ V +LG A KVV+ KD TTIV + + R+AQIR I+ DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DAL+AT+AA LLR +D +K ND+++ G DIV+RAL P + IA NAG +G+ + K+L S ++ +G+NAATG YEDL+ AG+IDP KVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGNVVSEDLGIKLENVTVNMLGRAKKVVIDKDNTTIVDGVGARTDIDARIAQIRQQIDTTTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALLRALKALDGLKAA--NDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESSDYNWGFNAATGEYEDLVKAGVIDPAKVVRTALQDAASV 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.391e-58 Identity = 118/236 (50.00%), Postives = 163/236 (69.07%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGG VI +++G+ L+ V LG A ++V+ KD TTIV DA+ RV QIR IE DY+REKL ER+AKL+GGVA+I+VG TE E+KE+K RV+DALNAT+AA L R + V ++ ND++++G DIV++AL PL+ IA+NAG +G+VV+ KVL + + +G++A G ++DL+AAGIIDPTKVVR L+ A+SV Sbjct: 278 APGFGDRRKAILEDIAILTGGEVISEDLGIKLESVTLSQLGQARRIVIDKDNTTIVDGEGDADAIKGRVGQIRAQIEETTSDYDREKLQERLAKLAGGVAIIRVGGSTEIEVKERKDRVDDALNATRAAVEEGIVPGGGTALARAAEVVARLQ--FHNDDQRIGGDIVRKALQAPLRQIAENAGEDGAVVAGKVLENGAYNFGFDAQIGEFKDLVAAGIIDPTKVVRTALQDAASV 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_DESAA (60 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groL PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.735e-58 Identity = 120/236 (50.85%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGGTV+ +++G+ L+ + LG +V + KD TTIV + A+ RV QIR I++ DY+REKL ER+AKL GGVAVI VGA TE E+KEKK RVEDALNAT+AA L+R +DA+ + E+K+GA +V RAL PL++IA NAG+ GSVV +KV +++ +GYNA T YEDL+ AG+IDPTKVVR L++A S+ Sbjct: 277 APGFGDRRKAMLEDIAILTGGTVVSEDMGIKLENMSLADLGKCKRVSIDKDNTTIVDGAGARSALEGRVKQIRAQIDDTTSDYDREKLQERLAKLIGGVAVINVGAATEVEMKEKKARVEDALNATRAAVEEGIVPGGGVALVR---AIDAVAKAKITGEQKIGARVVMRALEAPLRMIANNAGMEGSVVLDKVKNTEG-SFGYNADTDTYEDLIEAGVIDPTKVVRLALQNACSI 508
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH605_SINMW (60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) GN=groL5 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.735e-58 Identity = 120/236 (50.85%), Postives = 157/236 (66.53%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGGTVI +++G+ L+ V ++LG A KV +TK+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK R++DALNAT+AA LLR S K+ E ND++ G +IV+RAL P + I +NAG S+V K+L D +GYNA TG Y D++A GIIDP KVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKGE---NDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKDTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH603_BRASB (60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL3 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.735e-58 Identity = 115/236 (48.73%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGGT I +++G+ L+ V +LG A KVV+ K+ TTIV + + R QI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DAL+AT+AA LLR + +D +K N ++K G DI++RA+ P++ I +NAG +GS+V K+L D + +G+NAATG Y+DL+ AG+IDP KVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGTTISEDLGIKLENVTLSMLGRAKKVVIDKENTTIVDGAGAKKDIEARTQQIKLQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGVALLRATKVLDGVKTA--NADQKAGVDIIRRAIQVPVRQIVQNAGEDGSLVVGKLLEKDTYSWGFNAATGEYQDLVQAGVIDPAKVVRTALQDAASV 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_ANADE (60 kDa chaperonin 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL2 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.735e-58 Identity = 122/240 (50.83%), Postives = 158/240 (65.83%), Query Frame = 2 Query: 8 CCS*APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 C APGFG+R+ L+DIAILTGG +I +E+GL L++V + LG A +V + KD TTIV ++ + RV IR IE DY+REKL ER+AKL GGVAVI VGA TETE+KEKK RVEDAL+AT+AA LR ++ +K N+ EKVG DIV+RA+ PL+ I+ N G GS+V KV + +G+NAATG YEDL+ AG+IDPTKV R L++A+SV Sbjct: 274 CAVKAPGFGDRRKAMLEDIAILTGGRMIAEELGLKLEQVTLKDLGRAKRVTVDKDNTTIVDGAGKKEDIEARVKTIRAQIEETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRCVKALEGVKV---NEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNAATGEYEDLVKAGVIDPTKVSRSALQNAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_SINMW (60 kDa chaperonin 1 OS=Sinorhizobium medicae (strain WSM419) GN=groL1 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.735e-58 Identity = 120/236 (50.85%), Postives = 157/236 (66.53%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGGTVI +++G+ L+ V ++LG A KV +TK+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK R++DALNAT+AA LLR S K+ E ND++ G +IV+RAL P + I +NAG S+V K+L D +GYNA TG Y D++A GIIDP KVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKGE---NDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKDTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_PROMA (60 kDa chaperonin 1 OS=Prochlorococcus marinus GN=groL1 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.735e-58 Identity = 119/236 (50.42%), Postives = 162/236 (68.64%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 AP FGER+ L DIA+LT GT+I ++ + LDKV LG A K+ +TK++TTIV + T+ V+ RVA I+ ++ + DY++EKLNERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TL++L ++D++ ++LD D + G DI+K+AL P K IA NAG NG VV ++ G+NAATG YEDL++AGIID KV+R L+ A S+ Sbjct: 276 APSFGERRKAALADIAVLTKGTLISEDKAMTLDKVSLADLGKARKITITKESTTIVANDDTKKEVASRVASIKRELDQTDSDYDKEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLIKLGEELDSLSKSLDGD-QATGVDIIKKALSAPAKQIALNAGENGDVVVSEIQRLGK---GFNAATGQYEDLISAGIIDAVKVIRLALQDAVSI 507
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 7.490e-58 Identity = 119/236 (50.42%), Postives = 163/236 (69.07%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFGER+ L DIAILTG ++GL ++ E LG A KV ++KD+TTI+ D +++D + RVAQ++ + + Y+ EKL ERIAKLSGGVAVI+VGA TETEL+++KLR+EDA NAT AA L+ LS V AIKE L++ +E++GADIV++AL P LIA+NAG+ G VV EK+ + + + GYNA T YE+L+ +G+IDP KV RC L++A+SV Sbjct: 323 APGFGERRKALLQDIAILTGAEFQASDLGLLVENTTIEQLGLARKVTISKDSTTIIADAASKDELQSRVAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSGYVPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIKNGE-WEVGYNAMTDTYENLVESGVIDPAKVTRCALQNAASV 557
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 7.490e-58 Identity = 118/236 (50.00%), Postives = 164/236 (69.49%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFGER+ L DIAILTG + ++ L ++ + LG A KV ++KD+TT++ D +++D + R+AQ++ + + Y+ EKL ERIAKLSGGVAVI+VGA TETEL+++KLR+EDA NAT AA L+ LS+ + AIKET ++ +E++GADIV++AL P LIA+NAGV G VV EK++ SD + GYNA T YE+L AG+IDP KV RC L++A+SV Sbjct: 322 APGFGERRKAMLQDIAILTGAEYLAMDMSLLVENATIDQLGIARKVTISKDSTTLIADAASKDELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVIPAIKETFEDADERLGADIVQKALLSPAALIAQNAGVEGEVVVEKIMFSD-WENGYNAMTDTYENLFEAGVIDPAKVTRCALQNAASV 556 The following BLAST results are available for this feature:
BLAST of CX295040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295040 ID=CX295040; Name=CX295040; organism=Citrus clementina; type=EST; length=728bpback to top |