CX295040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_NOCFA (60 kDa chaperonin 2 OS=Nocardia farcinica GN=groL2 PE=3 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 7.490e-58 Identity = 127/236 (53.81%), Postives = 162/236 (68.64%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGG VI +EVGL+L+ G E+LG A KVV+TKD TTIV +A+ RVAQIRT IEN++ DY+REKL ER+AKL+GGVAVI+ GA TE ELKE+K R+EDA+ KAA LL+ + +D +K T D E GA+IV+ AL PLK IA NAG+ VV+EKV S+ +G NA +G YEDL+AAG+ DP KV R L++A+S+ Sbjct: 276 APGFGDRRKAQLADIAILTGGEVISEEVGLSLETAGIELLGQARKVVVTKDETTIVEGAGDAEAIKGRVAQIRTEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQAAPALDELKLTGD---EATGANIVRVALSAPLKQIAFNAGLEPGVVAEKV-SNLEAGHGLNADSGEYEDLLAAGVADPVKVTRSALQNAASI 507
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_ERYLH (60 kDa chaperonin 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL1 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 7.490e-58 Identity = 116/236 (49.15%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+D+AILT G V+ +E+G L+ V +LG A KV++ KD TTIV + + RV+QIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DAL+AT+AA LLR +D +K ND+++ G DIV+RAL P + IA+NAG +G+ + K+L D++ +G+NAATG YEDL+ +G+IDP KVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDVAILTAGNVVSEELGTKLENVTIGMLGRAKKVIIDKDNTTIVDGAGNKADIDARVSQIRAQIETTTSDYDREKLQERVAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALLRALKSLDGLKAA--NDDQQSGIDIVRRALRAPARQIAENAGEDGAYIVGKLLEGDDYNHGFNAATGEYEDLVKSGVIDPAKVVRTALQDAASV 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_ARCB4 (60 kDa chaperonin OS=Arcobacter butzleri (strain RM4018) GN=groL PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.782e-58 Identity = 123/237 (51.90%), Postives = 158/237 (66.67%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLD-NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIA+LTGGTVI +E+G+ L+ LG ASK+V+ KD TTIV + V RV QI+ I N DY+REKL ER+AKLSGGVAVI+VGA TETE+KEKK RV+DAL+AT+AA L++ S KV+ LD +E++GADIV RA+ PLK IA NAG + VV+ +V S N G+NAATG Y D+ AGI+DP KV R +++A SV Sbjct: 277 APGFGDRRKAMLEDIAVLTGGTVISEEMGMKLETAEFSCLGTASKIVIDKDNTTIVDGNGDNERVVARVNQIKAEISNTTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATRAAVEEGIVIGGGAALIKASKKVN-----LDLTGDERIGADIVLRAISAPLKQIAINAGFDAGVVANEVEKSSNENLGFNAATGEYVDMFEAGIVDPAKVERVAMQNAVSV 508
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_VIBC3 (60 kDa chaperonin 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=groL2 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.782e-58 Identity = 122/236 (51.69%), Postives = 161/236 (68.22%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGG VI +E+GL L+K E LG A +V +TK+ +TI+ Q A+ RVAQIR IE A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG + RA+ PL+ I KNAG SVV+ V + + + YGYNAATG Y+D++ GI+DPTKV R L+ A+SV Sbjct: 278 APGFGDRRKAMLQDIAILTGGVVISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKLSSL--VGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGN-YGYNAATGVYDDMIEMGILDPTKVTRSALQFAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 116/236 (49.15%), Postives = 166/236 (70.34%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFGER+ L DIAILTG ++GL ++ + LG A KV ++KD+TT++ D +++D + R++Q++ + + Y+ EKL ERIAKL+GGVAVI+VGA TETEL+++KLR+EDA NAT AA TL+ LS+ + AIKE L++ +E++GADIV++AL P LIA+NAG+ G VV EK++ S+ + GYNA T YE+L+ AG+IDP KV RC L++A+SV Sbjct: 282 APGFGERRKAMLQDIAILTGAEYQALDMGLLVENTTIDQLGIARKVTISKDSTTLIADAASKDELQARISQLKKELSETDSVYDSEKLAERIAKLAGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSE-WEIGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASV 516
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_VIBFM (60 kDa chaperonin OS=Vibrio fischeri (strain MJ11) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 120/236 (50.85%), Postives = 161/236 (68.22%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIA+LT G+VI +E+GL L+KV E LG A +V +TK+TTTI+ + + RV+QIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SKV + DN+E+ VG + RA+ P++ I KNAG SVV+ V + + YGYNAATG Y D++ GI+DPTKV R L+ A+SV Sbjct: 278 APGFGDRRKAMLQDIAVLTAGSVISEEIGLELEKVVLEDLGQAKRVTITKETTTIIDGSGEETIIQGRVSQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRVASKVAGL--VGDNEEQNVGIRVALRAMEAPIRQITKNAGEEDSVVANNVKAGEG-SYGYNAATGEYGDMIEMGILDPTKVTRSALQFAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_VIBF1 (60 kDa chaperonin OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 120/236 (50.85%), Postives = 161/236 (68.22%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIA+LT G+VI +E+GL L+KV E LG A +V +TK+TTTI+ + + RV+QIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SKV + DN+E+ VG + RA+ P++ I KNAG SVV+ V + + YGYNAATG Y D++ GI+DPTKV R L+ A+SV Sbjct: 278 APGFGDRRKAMLQDIAVLTAGSVISEEIGLELEKVVLEDLGQAKRVTITKETTTIIDGSGEETIIQGRVSQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRVASKVAGL--VGDNEEQNVGIRVALRAMEAPIRQITKNAGEEDSVVANNVKAGEG-SYGYNAATGEYGDMIEMGILDPTKVTRSALQFAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 121/242 (50.00%), Postives = 162/242 (66.94%), Query Frame = 2 Query: 2 RDCCS*APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 + C APGFG+R+ + ++DIAILTGG VI +E+GL L+ LG A KVV+TKD TTIV + + R+ QI+ +E + D++REKL ER+AKL+GGVAVI+VGA TETELKEKK RVEDAL+AT+AA LL+ V + + LD D E+ GA IV RAL P++ IA+NAG +GS+V +KV + G+NA TG YEDL+AAG+IDP V R L++A+S+ Sbjct: 271 QSCAVKAPGFGDRRKRMMEDIAILTGGEVITEELGLKLENTQLSQLGRARKVVVTKDDTTIVDGAGDPEQIKGRINQIKAELETTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKHRVEDALSATRAALEEGIVPGGGVALLKAQKAVGELLDELDGD-ERTGARIVYRALEEPIRQIAENAGADGSIVVDKV-RAQGDSIGFNALTGGYEDLVAAGVIDPAMVTRSALQNAASI 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_CAUCR (60 kDa chaperonin OS=Caulobacter crescentus GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 117/236 (49.58%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTG V+ +++G+ L+ V E+LG A KV +TKD TTIV + + R+AQI+ IE+ DY++EKL ER+AKL+GGVAVI+VG TE E+KEKK RV+DALNAT+AA LL+ S + + DND++ G IV+RAL P++ IA+NAGV GS+V K+L +DN +G+NA T Y DL+ G+IDP KVVR L++A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGAQVVSEDIGIKLENVSLEMLGRAKKVSITKDDTTIVDGVGEKADIEARIAQIKRQIEDTTSDYDKEKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAADEGIVPGGGTALLKASKALAGV--VGDNDDQTAGIAIVRRALQAPIRQIAENAGVEGSIVVGKILENDNSAFGFNAQTEQYVDLVVDGVIDPAKVVRTALQNAASV 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_CAUCN (60 kDa chaperonin OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=groL PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 117/236 (49.58%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTG V+ +++G+ L+ V E+LG A KV +TKD TTIV + + R+AQI+ IE+ DY++EKL ER+AKL+GGVAVI+VG TE E+KEKK RV+DALNAT+AA LL+ S + + DND++ G IV+RAL P++ IA+NAGV GS+V K+L +DN +G+NA T Y DL+ G+IDP KVVR L++A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGAQVVSEDIGIKLENVSLEMLGRAKKVSITKDDTTIVDGVGEKADIEARIAQIKRQIEDTTSDYDKEKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAADEGIVPGGGTALLKASKALAGV--VGDNDDQTAGIAIVRRALQAPIRQIAENAGVEGSIVVGKILENDNSAFGFNAQTEQYVDLVVDGVIDPAKVVRTALQNAASV 511 The following BLAST results are available for this feature:
BLAST of CX295040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295040 ID=CX295040; Name=CX295040; organism=Citrus clementina; type=EST; length=728bpback to top |