CX295040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_AGRVS (60 kDa chaperonin OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 117/236 (49.58%), Postives = 162/236 (68.64%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGGTVI +++G+ L+ V ++LG A K+ +TK+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K R++DALNAT+AA LLR S+K+ +K ND+++ G +IV+RAL ++ IA NAG S++ K+L DN YGYNA TG + D++A GI+DP KVVR L++A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGTVISEDLGIKLETVTLDMLGRAKKISITKENTTIVDGAGQKSDIEGRVAQIKAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGSTEIEVKERKDRIDDALNATRAAVQEGIVPGGGTALLRSSTKI-TVKGV--NDDQEAGINIVRRALQSLVRQIATNAGDEASIIVGKILDKDNDNYGYNAQTGEFGDMIAMGIVDPVKVVRTALQNAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 117/236 (49.58%), Postives = 158/236 (66.95%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILT GTVI +++G+ L+ V +LG A KV + K+ TTI+ ++ + R AQIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK RV+DAL+AT+AA LLR +D+IK ND+++VG DIV+RA+ P++ IA+NAG GS++ K+ + YG+NA TG Y DL A G+IDP KVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTAGTVISEDLGIKLENVTLNMLGRAKKVAIEKENTTIIDGAGSKAELDGRTAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDSIKTA--NDDQRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASV 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_VIBPA (60 kDa chaperonin 1 OS=Vibrio parahaemolyticus GN=groL1 PE=3 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 121/236 (51.27%), Postives = 161/236 (68.22%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGGTVI +E+GL L+KV E LG A +V +TK+ +TI+ + + RVAQIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG + RA+ P++ I KNAG SVV+ V + + YGYNAATG Y D++ GI+DPTKV R L+ A+SV Sbjct: 278 APGFGDRRKAMLQDIAILTGGTVISEEIGLELEKVTLEDLGQAKRVSITKENSTIIDGAGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKIVDLEG--DNEEQNVGIRVALRAMEAPIRQITKNAGDEDSVVANNVKAGEG-SYGYNAATGEYGDMLEMGILDPTKVTRSALQFAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_SYNSC (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9605) GN=groL1 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57 Identity = 124/236 (52.54%), Postives = 163/236 (69.07%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 AP FGER+ L DIAILTGGT+I ++ + LDKV E LG A +V ++K+ TTIV + + AVS+RV+ IR +E E DY+REKL ERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TLL+L+ +DA+ +L N +++ G +IV+RAL P+ IA NAG NG VV + SS G+NA +G YEDLMAAGI+D KVVR ++ + S+ Sbjct: 276 APSFGERRKAALADIAILTGGTLISEDKAMTLDKVTLEDLGKARRVTISKENTTIVANDDHRQAVSERVSAIRRELEATESDYDREKLQERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLQLADSLDALASSL-NGDQRTGVEIVQRALTAPIHQIATNAGQNGDVVIAGMRSSGQ---GFNALSGVYEDLMAAGIVDAAKVVRLAVQDSISI 507
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_VIBHB (60 kDa chaperonin OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=groL PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.669e-57 Identity = 122/236 (51.69%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGG VI +EVGL L+KV E LG A +V +TK+ TTI+ + + RVAQIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG + RA+ P++ I KNAG SVV+ V + + YGYNAATG Y D++ GI+DPTKV R L+ A+SV Sbjct: 278 APGFGDRRKAMLQDIAILTGGIVISEEVGLELEKVALEDLGQAKRVAITKENTTIIDGMGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKIVDLEG--DNEEQNVGIRVALRAMEAPIRQITKNAGDEESVVANNVKAGEG-SYGYNAATGEYGDMLEMGILDPTKVTRSALQFAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_PETMO (60 kDa chaperonin OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=groL PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.669e-57 Identity = 116/236 (49.15%), Postives = 157/236 (66.53%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ + L DIAILTGGTVI +E+GL L+ + LG A V + K+ T IVG A+ +R+AQI+ IEN DYE+E L ER+AKLSGGVAVI+ GA TETELKEKK R+EDAL+AT+AA TLLR V+ TL D EK+GA +V ++L P+K I +NAG+ +++ EK++ D+ KYGY+ Y ++ +GIIDPTKV R L++A+S+ Sbjct: 276 APGFGDRRKEMLRDIAILTGGTVISEEIGLTLEDISINDLGQADLVRVAKEDTIIVGGKGEPTAIKERIAQIKAQIENTSSDYEKETLQERLAKLSGGVAVIKAGAATETELKEKKHRIEDALSATRAAVEEGIVAGGGVTLLRAKKAVEEFANTLSGD-EKIGAQLVAKSLDAPVKQIIRNAGLEPAIIIEKIIEKDDSKYGYDVLKERYVNMFESGIIDPTKVTRSALQNAASI 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_ENTS8 (60 kDa chaperonin OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=groL PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.669e-57 Identity = 121/236 (51.27%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGGTVI +E+G+ L+K E LG A +VV+ KDTTTI+ + A+ RV QIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R+++K+ + T N+++ VG + RA+ PL+ I NAG SVV+ V + D + YGYNAAT Y +++ GI+DPTKV R L++ASSV Sbjct: 278 APGFGDRRKAMLQDIAILTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGDESAIQGRVGQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAAKLTEL--TGQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANNVKAGDGN-YGYNAATEEYGNMIDMGILDPTKVTRSALQYASSV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_BRAJA (60 kDa chaperonin 2 OS=Bradyrhizobium japonicum GN=groL2 PE=2 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.669e-57 Identity = 115/236 (48.73%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGG I +++G+ L+ V +LG A KV++ K+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DA++AT+AA LLR S + I+ ND++K G +IV++AL YP + IA NAG +GSV+ K+L D + YGY++ TG Y +L++ GIIDPTKVVR +++A+SV Sbjct: 278 APGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLNMLGRAKKVMIDKENTTIVSGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRASEHLKGIR--TKNDDQKTGVEIVRKALSYPARQIAINAGEDGSVIVGKILEKDQYSYGYDSQTGEYGNLVSKGIIDPTKVVRVAIQNAASV 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_VIBHA (60 kDa chaperonin 1 OS=Vibrio harveyi GN=groL1 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.669e-57 Identity = 122/236 (51.69%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGG VI +EVGL L+KV E LG A +V +TK+ TTI+ + + RVAQIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG + RA+ P++ I KNAG SVV+ V + + YGYNAATG Y D++ GI+DPTKV R L+ A+SV Sbjct: 278 APGFGDRRKAMLQDIAILTGGIVISEEVGLELEKVALEDLGQAKRVAITKENTTIIDGVGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKIVDLEG--DNEEQNVGIRVALRAMEAPIRQITKNAGDEESVVANNVKAGEG-SYGYNAATGEYGDMLEMGILDPTKVTRSALQFAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_ROSDO (60 kDa chaperonin 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=groL1 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.669e-57 Identity = 119/236 (50.42%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGG VI +++G+ L+ V ++LG A KV +TKD TT+V + + RV+QIRT IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DALNAT+AA L++ + +D ++ N ++ G IV+RAL PL+ IA+NAGV+GSVV+ K+ SD+ +G+NA T Y DL + G+IDP KVVR LE ASSV Sbjct: 278 APGFGDRRKAMLQDIAILTGGQVISEDLGMKLESVTIDMLGTAKKVAITKDETTVVNGAGEKAEIDARVSQIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKALDGLQGA--NPDQNAGIAIVRRALEAPLRQIAENAGVDGSVVAGKIRESDDATFGFNAQTEEYGDLFSFGVIDPAKVVRTALEDASSV 511 The following BLAST results are available for this feature:
BLAST of CX295040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295040 ID=CX295040; Name=CX295040; organism=Citrus clementina; type=EST; length=728bpback to top |