CX295040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_WOLSU (60 kDa chaperonin OS=Wolinella succinogenes GN=groL PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.179e-57 Identity = 123/236 (52.12%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ + L DIA LTGG+VI +E+G L+ LG A++VV+ KD +TIV ++D V+ RVAQIRT IE DY+REKL ER+AKLSGGVAVI+VGA +E E+KEKK RV+DAL+ATKAA L+R ++KV K L D EK+G +I+KRA+ PLK IA+NAG + VV+ V + N +G+NAA G Y D+ A GIIDP KV R L++A SV Sbjct: 278 APGFGDRRKEMLKDIATLTGGSVISEEIGKTLESATIADLGQAARVVIDKDNSTIVDGKGSKDEVNARVAQIRTQIEATTSDYDREKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAAKV---KLELSGD-EKIGYEIIKRAISAPLKQIAQNAGFDAGVVANNVEQNGNENFGFNAANGEYVDMFAEGIIDPLKVARIALQNAVSV 509
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_HYDS0 (60 kDa chaperonin OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=groL PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.179e-57 Identity = 118/235 (50.21%), Postives = 158/235 (67.23%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASS 724 APGFG+R+ YL+DIAILTGG I +++G+ L+ V ++LG A KV++ K+ TTIVG + V R+ QI+ I+ DY+REKL ER+AKLSGGVA+I+VGA TE+ELKEKK RVEDA++ATKAA L + S ++ T N + ++G IV A YPLK IA NAG GS+V EKV + YG++AA G Y+D++ AGIIDPTKVVR L++A+S Sbjct: 278 APGFGQRRKDYLEDIAILTGGQAITEDLGIKLESVTLDMLGQAEKVIVDKENTTIVGGKGDKKKVEARIEQIKKQIKETTSDYDREKLQERLAKLSGGVAIIRVGAATESELKEKKARVEDAVHATKAAAEEGIVAGGGTALAKASRVLE--NYTSANKDRELGVKIVYNACKYPLKQIAYNAGYEGSLVLEKVYEDQDKNYGFDAANGEYKDMVKAGIIDPTKVVRTALQNAAS 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH604_RHIME (60 kDa chaperonin 4 OS=Rhizobium meliloti GN=groL4 PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.179e-57 Identity = 119/236 (50.42%), Postives = 157/236 (66.53%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGGTVI +++G+ L+ V ++LG A KV +TK+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK R++DALNAT+AA LLR S K+ E ND++ G +IV+RAL P + I +NAG S+V K+L + +GYNA TG Y D++A GIIDP KVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKGE---NDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKNTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH604_RHIEC (60 kDa chaperonin 4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL4 PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.179e-57 Identity = 117/236 (49.58%), Postives = 159/236 (67.37%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILT GTVI +++G+ L+ V +LG A K+ + K+ TTI+ +++ +S R+AQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK RV+DAL+AT+AA LLR +D IK ND+++VG +IV+RAL P + IA+NAG GSVV K+ + YG+NA TG + DL A G+IDP KVVR L+ ASS+ Sbjct: 278 APGFGDRRKAMLEDIAILTAGTVISEDLGIKLENVTLNMLGRAKKITVEKENTTIIDGVGSKEEISGRIAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDNIKTA--NDDQRVGVEIVRRALEAPARQIAENAGAEGSVVVGKLREKSDFSYGWNAQTGEFGDLYAQGVIDPAKVVRTALQDASSI 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_RHIME (60 kDa chaperonin 1 OS=Rhizobium meliloti GN=groL1 PE=2 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 2.179e-57 Identity = 119/236 (50.42%), Postives = 157/236 (66.53%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGGTVI +++G+ L+ V ++LG A KV +TK+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK R++DALNAT+AA LLR S K+ E ND++ G +IV+RAL P + I +NAG S+V K+L + +GYNA TG Y D++A GIIDP KVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKGE---NDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKNTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.846e-57 Identity = 121/236 (51.27%), Postives = 155/236 (65.68%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGG V +EVG+ L+ + LG A V + KD T IVG Q+ + KR+AQI+ IE +YE+E L ER+AKL+GGVAVI+VGA TETELKEKK R+EDAL+AT+AA TLLR V+ I E LD D EK+GA IV AL P+ IAKNAG +G+++ KVL D+ YG++A G Y D+ GIIDP KV R L++A+S+ Sbjct: 276 APGFGDRRKAMLQDIAILTGGIVASEEVGINLEDLTLNDLGRADVVRVKKDETIIVGGHGDQEEIKKRIAQIKAQIEQTTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGITLLRARKPVEKIVEELDGD-EKIGAKIVYEALSAPINQIAKNAGYDGAIIIHKVLEQDDPAYGFDALKGEYCDMFERGIIDPAKVTRSALQNAASI 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_DESVV (60 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groL PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.846e-57 Identity = 119/236 (50.42%), Postives = 157/236 (66.53%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFGER+ L DIA+LTGG V+ +++G+ L+ + LG A +VV+ K+ TTIV D + RV QIR IE DY+REKL ER+AKL GGVAVI VGA TETE+KEKK RVEDALNAT+AA L+R++ +D IK +D+E G +I++RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SV Sbjct: 278 APGFGERRKAMLQDIAVLTGGQVVSEDMGIKLENISVADLGTAKRVVIDKENTTIVDGAGKGDDIKARVKQIRAQIEETTSDYDREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALVRVAKVLDDIKPA--DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKD-GFGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_DESVH (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groL PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.846e-57 Identity = 119/236 (50.42%), Postives = 157/236 (66.53%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFGER+ L DIA+LTGG V+ +++G+ L+ + LG A +VV+ K+ TTIV D + RV QIR IE DY+REKL ER+AKL GGVAVI VGA TETE+KEKK RVEDALNAT+AA L+R++ +D IK +D+E G +I++RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SV Sbjct: 278 APGFGERRKAMLQDIAVLTGGQVVSEDMGIKLENISVADLGTAKRVVIDKENTTIVDGAGKGDDIKARVKQIRAQIEETTSDYDREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALVRVAKVLDDIKPA--DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKD-GFGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH601_VIBCH (60 kDa chaperonin 1 OS=Vibrio cholerae GN=groL1 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.846e-57 Identity = 122/236 (51.69%), Postives = 160/236 (67.80%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGG VI +E+GL L+K E LG A +V +TK+ +TI+ Q A+ RVAQIR IE A DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG + RA+ PL+ I KNAG SVV+ V + + + YGYNAATG Y D++ GI+DPTKV R L+ A+SV Sbjct: 278 APGFGDRRKAMLQDIAILTGGVVISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKLSSL--VGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGN-YGYNAATGVYGDMIEMGILDPTKVTRSALQFAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_ACICJ (60 kDa chaperonin OS=Acidiphilium cryptum (strain JF-5) GN=groL PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.717e-57 Identity = 113/236 (47.88%), Postives = 167/236 (70.76%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGG VI +++G+ L+ V +LG A KV++ K+ TTIV + ++ R QIR IE DY+REKL ER+AKL+GGVAVI+VG +ETE+KE+K RV+DAL+AT+AA L R S ++ +K DND+++ G DI+++A+ P++ IA+NAG +G+V+S KVL +D++ +G++A +G ++D++ AGIIDPTKVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGQVISEDLGIKLETVTLNMLGRAKKVLIEKENTTIVEGAGKKADITGRCNQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGASETEVKERKDRVDDALHATRAAVEEGIVPGGGVALARASLAINKLK--ADNDDQRFGIDIIRKAVLAPMRQIAENAGEDGAVISGKVLDNDDYSFGFDAQSGEFKDMVKAGIIDPTKVVRTALQDAASV 511 The following BLAST results are available for this feature:
BLAST of CX295040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295040 ID=CX295040; Name=CX295040; organism=Citrus clementina; type=EST; length=728bpback to top |