CX295045

Overview
NameCX295045
Unique NameCX295045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA1_YEAST (Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae GN=UBA1 PE=1 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 7.027e-48
Identity = 98/243 (40.33%), Postives = 144/243 (59.26%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPV--KLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSW-TVWDRW 720
            L F FP++A TSNG PFWS  KR P PL+F + +  H  F++A + LRA  YGI   D    P   +    ++ +I+P+F P  N+KI+ ++     +  + + +  I+               G+K+ P+ FEKDDDTN H++ I   +N RA+NY I   D+ K KFIAGRIIPAIAT+T++ TGLV LELYK++D    +E Y+N F NLALP F  +EP+     ++ +  +  +WDR+
Sbjct:  691 LLFNFPKDAKTSNGEPFWSGAKRAPTPLEFDIYNNDHFHFVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNANAANGSDEIDQLVSSLPDPSTL--AGFKLEPVDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFSEPIASPKGEYNNKKYDKIWDRF 931          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA1_SCHPO (Ubiquitin-activating enzyme E1 1 OS=Schizosaccharomyces pombe GN=ptr3 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.264e-45
Identity = 94/243 (38.68%), Postives = 139/243 (57.20%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPV-PPKVFKHQDMSWTVWDRWIL 726
            L F FP+++ TS G PFWS PKR P PL F + +  H  F++AA+ L A  YG+        P      +     P F PK  +KI+ +E   +  T +  D   +                G+++ P +FEKDDD+N H+D I   +N+RA NY I   D+ K KF+AG+I+PA+ TSTA+ +GLVCLEL K++DG  K+E+Y+N F NLA+ LF+ ++P+  PK+  +      +WDR+ L
Sbjct:  685 LLFNFPKDSVTSTGQPFWSGPKRAPTPLSFDIHNREHFDFIVAAASLYAFNYGLKSET---DPAIYERVLAGYNPPPFAPKSGIKIQVNENEEAPETAANKDKQELKSIADSLPPPSSL--VGFRLTPAEFEKDDDSNHHIDFITAASNLRAMNYDITPADRFKTKFVAGKIVPAMCTSTAVVSGLVCLELVKLVDGKKKIEEYKNGFFNLAIGLFTFSDPIASPKMKVNGKEIDKIWDRYNL 922          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA6_MOUSE (Ubiquitin-like modifier-activating enzyme 6 OS=Mus musculus GN=Uba6 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.243e-36
Identity = 91/243 (37.45%), Postives = 129/243 (53.09%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPT--GYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVP-PKVFKHQDMSWTVWDRW 720
            L   FP      +G+ FW +PKR P P++F +++  HL FL +A+ L A  Y IP  +   S   L D +++V + +F+P   V ++TDE A       +      N              T    +M  + FEKDDD N H+D I   +N+RA+ Y I   D+ K K IAG+IIPAIATSTA  +GLV LE+ KV  GG+  + Y+N F NLA+P+    E     K      +S+T+WDRW
Sbjct:  718 LLHCFPLETRLKDGSLFWQSPKRPPSPIKFDLNEPLHLSFLQSAAKLYATVYCIPFSEKDLSVNSLMDILSEVKIEEFKPSNKV-VQTDETARKPDHVPVSSEDERNAVFQLEEALSSNKATKSDLQMTVLSFEKDDDRNGHIDFITAASNLRAKMYSIEPADRFKTKRIAGKIIPAIATSTAAVSGLVALEMIKVA-GGYPFDAYKNCFLNLAIPIIVFTETSEVRKTEIRNGISFTIWDRW 958          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA7_HUMAN (Ubiquitin-like modifier-activating enzyme 7 OS=Homo sapiens GN=UBA7 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 83/236 (35.17%), Postives = 128/236 (54.24%), Query Frame = 1
Query:   13 FPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIP-IPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSWTVWDR 717
            FP N    +GTPFWS PK+ P+PL+F  +  +HL +++AA+ L A+ +G+P   DW      L + +  +  PD Q    +     E A++ +    +    +N               G  + P+ FEKDDD+NFH+D +   A++R +NYGIP V++ ++K I G+IIPAIAT+TA   GL+ LELYKV+ G      +R+++ +LA        P  P +     + WT WDR
Sbjct:  692 FPPNKVLEDGTPFWSGPKQCPQPLEFDTNQDTHLLYVLAAANLYAQMHGLPGSQDWTA----LRELLKLLPQPDPQQMAPIFASNLELASASAEFGPEQQKELNKALEVWS-------VGPPLKPLMFEKDDDSNFHVDFVVAAASLRCQNYGIPPVNRAQSKRIVGQIIPAIATTTAAVAGLLGLELYKVVSGPRPRSAFRHSYLHLAENYLIRYMPFAPAIQTFHHLKWTSWDR 916          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA6_HUMAN (Ubiquitin-like modifier-activating enzyme 6 OS=Homo sapiens GN=UBA6 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 91/243 (37.45%), Postives = 130/243 (53.50%), Query Frame = 1
Query:    1 LTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINXXXXXXXXXXXXXPT--GYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFK-HQDMSWTVWDRW 720
            L   FP +    +G+ FW +PKR P P++F +++  HL FL  A+ L A  Y IP  +   S   L + +++V + +F+P   V ++TDE A       I      N              T    +M  + FEKDDD N H+D I   +N+RA+ Y I   D+ K K IAG+IIPAIAT+TA  +GLV LE+ KV  GG+  E Y+N F NLA+P+    E    +  K    +S+T+WDRW
Sbjct:  718 LLHCFPLDIRLKDGSLFWQSPKRPPSPIKFDLNEPLHLSFLQNAAKLYATVYCIPFAEEDLSADALLNILSEVKIQEFKPSNKV-VQTDETARKPDHVPISSEDERNAIFQLEKAILSNEATKSDLQMAVLSFEKDDDHNGHIDFITAASNLRAKMYSIEPADRFKTKRIAGKIIPAIATTTATVSGLVALEMIKV-TGGYPFEAYKNCFLNLAIPIVVFTETTEVRKTKIRNGISFTIWDRW 958          
BLAST of CX295045 vs. ExPASy Swiss-Prot
Match: UBA1_CANAL (Ubiquitin-activating enzyme E1 1 (Fragment) OS=Candida albicans GN=UBA1 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28
Identity = 62/114 (54.39%), Postives = 79/114 (69.30%), Query Frame = 1
Query:  388 QFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSW-TVWDRWIL 726
            +FEKDDDTN H++ I   +N RA NYGI   D  K KFIAG+IIPAIAT+TA+ TGLVCLELYKV+DG   +E Y+N F NLALP    +EP+     K+ +  +  +WDR+ L
Sbjct:    1 EFEKDDDTNHHIEFITAASNCRALNYGIEIADAHKTKFIAGKIIPAIATTTALVTGLVCLELYKVVDGKDDIEQYKNGFINLALPFIGFSEPIKSPEGKYNNKKFDQIWDRFEL 114          
The following BLAST results are available for this feature:
BLAST of CX295045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
UBA1_YEAST7.027e-4840.33Ubiquitin-activating enzyme E1 1 OS=Saccharomyces ... [more]
UBA1_SCHPO3.264e-4538.68Ubiquitin-activating enzyme E1 1 OS=Schizosaccharo... [more]
UBA6_MOUSE1.243e-3637.45Ubiquitin-like modifier-activating enzyme 6 OS=Mus... [more]
UBA7_HUMAN4.724e-3635.17Ubiquitin-like modifier-activating enzyme 7 OS=Hom... [more]
UBA6_HUMAN4.724e-3637.45Ubiquitin-like modifier-activating enzyme 6 OS=Hom... [more]
UBA1_CANAL1.627e-2854.39Ubiquitin-activating enzyme E1 1 (Fragment) OS=Can... [more]

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Properties
Property NameValue
Genbank descriptionC05068A04SK DroRLeaf1 Citrus clementina cDNA clone C05068A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295045 ID=CX295045; Name=CX295045; organism=Citrus clementina; type=EST; length=727bp
TTGACATTTACTTTTCCTGAGAATGCTACAACCAGCAACGGGACACCCTT
CTGGTCAGCCCCCAAGCGTTTCCCCCGCCCTTTGCAGTTCTCAGTTGATG
ATCTCAGTCACCTTCAATTTTTGATGGCAGCATCAATATTACGAGCTGAA
ACATATGGCATTCCTATCCCTGATTGGGTCAAGTCACCCGTAAAGCTAGC
TGATGCTGTTAACAAAGTGATAGTCCCTGATTTCCAGCCCAAGGAAAATG
TAAAGATTGAGACAGATGAGAAAGCCACAAGTATGTCCACTGGATCAATT
GATGATGCTGTAGTAATCAATGAGTTGCTCCAAAAGTTAGAAAAATGCCA
GAAGCAGCTGCCAACAGGTTACAAGATGAACCCAATCCAGTTTGAAAAGG
ATGATGATACAAACTTTCACATGGACTTAATAGCTGGCCTTGCAAACATG
AGGGCAAGGAACTATGGCATCCCTGAAGTTGACAAGCTCAAGGCCAAGTT
CATTGCAGGGAGGATTATCCCAGCAATCGCAACCTCTACTGCCATGGCAA
CTGGTCTTGTGTGCTTGGAGCTTTATAAGGTTCTAGATGGTGGGCACAAA
CTGGAAGACTACCGAAATACCTTTGCCAATCTGGCCCTCCCTCTGTTCTC
GATGGCTGAGCCAGTTCCACCTAAGGTGTTCAAGCATCAGGATATGAGCT
GGACTGTGTGGGACCGGTGGATTTTGC
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