CX295050

Overview
NameCX295050
Unique NameCX295050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295050 vs. ExPASy Swiss-Prot
Match: SPYA_PONAB (Serine--pyruvate aminotransferase OS=Pongo abelii GN=AGXT PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.025e-18
Identity = 65/193 (33.68%), Postives = 94/193 (48.70%), Query Frame = 1
Query:   40 YRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA--SKTAKSVRVFFDWKDYIKFYNLGT---FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGH 603
            +R+  L LVD V S+      MD+ GID+  +GSQKAL+ P G  ++  S KA +   S+  K    + D K    F+        + +T  I  LY LR +L LI E+GLEN   +HR         ++A GL+   +       TVT V VP   +  +IV      +++ +  GL    GKV RIG LG+
Sbjct:  174 HRYKCLLLVDSVVSVGGTPVYMDQQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPIISLYSLRESLALIAEQGLENSWRKHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVPAGYDWRDIVSYVMDHFDIEIMGGLGPPTGKVLRIGLLGY 366          
BLAST of CX295050 vs. ExPASy Swiss-Prot
Match: SPYA_HUMAN (Serine--pyruvate aminotransferase OS=Homo sapiens GN=AGXT PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.696e-18
Identity = 64/192 (33.33%), Postives = 93/192 (48.44%), Query Frame = 1
Query:   40 YRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA--SKTAKSVRVFFDWKDYIKFYNLGT---FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 600
            +R+  L LVD V+S+      MD  GID+  +GSQKAL+ P G  ++  S KA +   S+  K    + D K    F+        + +T  +  LY LR +L LI E+GLEN   +HR         ++A GL+   +       TVT V VP   +  +IV      +++ +  GL    GKV RIG LG
Sbjct:  174 HRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLG 365          
BLAST of CX295050 vs. ExPASy Swiss-Prot
Match: SPYA_RABIT (Serine--pyruvate aminotransferase OS=Oryctolagus cuniculus GN=AGXT PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17
Identity = 61/193 (31.61%), Postives = 95/193 (49.22%), Query Frame = 1
Query:   40 YRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLG------TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 600
            +R+  L LVD V+S+      MD+ GIDV  +GSQKAL+ P G  ++  S KA ++   A+  + F  + D     N+         + +T  +  ++ LR +L L+ E+GLE   +RHR + +     ++  GL+   +       TVT VIVP      +IV      + + +  GL   A KV RIG LG
Sbjct:  174 HRYKCLLLVDSVASLGGAPIYMDQQGIDVLYSGSQKALNAPPGTSLISFSDKA-KSKIYARKTKPFSFYMDVQLLANIWGCDGKPRMYHHTTPVIGIFALRESLALLVEQGLEKSWQRHREVAQHLYRRLQELGLQLFVKDPALRLPTVTTVIVPASYRWRDIVSYVMHHFGIEITGGLGPSADKVLRIGLLG 365          
BLAST of CX295050 vs. ExPASy Swiss-Prot
Match: SPYA_CALJA (Serine--pyruvate aminotransferase, mitochondrial OS=Callithrix jacchus GN=AGXT PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.451e-16
Identity = 60/192 (31.25%), Postives = 90/192 (46.88%), Query Frame = 1
Query:   40 YRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA--SKTAKSVRVFFDWKDYIKFYNLG---TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 600
            +R+  L LVD V+S+      MD+ GID+  +GSQK L+ P G  ++  S  A     S+  K    + D K     +        + +T  +  LY LR  L L+ E+GLEN   +HR         ++A GL+   +       TVT V VP   +  +IV    +R+ + +  GL    GKV RIG +G
Sbjct:  196 HRYKCLLLVDSVASLGGAPLYMDQQGIDILYSGSQKVLNAPPGTSLLSFSDTAKNKIYSRKTKPSSFYLDVKYLANLWGCDGQPRMYHHTTPVVSLYSLREGLALLSEQGLENSWRKHREAAAYLHGRLQALGLRLFVKDPALRLPTVTTVAVPTGYDWRDIVSYLIERFGIEITGGLGPSTGKVLRIGLMG 387          
BLAST of CX295050 vs. ExPASy Swiss-Prot
Match: SPYA_MOUSE (Serine--pyruvate aminotransferase, mitochondrial OS=Mus musculus GN=Agxt PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.098e-15
Identity = 60/197 (30.46%), Postives = 90/197 (45.69%), Query Frame = 1
Query:   40 YRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFW---------PYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGH 603
            +R+  L LVD V+S+  +   MD+ GID+  + SQK L+ P G+ ++  + KA     + K+  V F    Y     L   W          +T  +  LY LR +L LI E GLEN   RHR         ++  GLK   +  E    T+T V    + N  +IV      +++ +  GL     +V RIG LG+
Sbjct:  196 HRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSF----YTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAERGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTAAGY-NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGY 387          
BLAST of CX295050 vs. ExPASy Swiss-Prot
Match: SPYA_DICDI (Serine--pyruvate aminotransferase OS=Dictyostelium discoideum GN=agxt PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14
Identity = 60/215 (27.91%), Postives = 99/215 (46.05%), Query Frame = 1
Query:   43 RHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFW-----------------------PYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK------NCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 600
            ++  L +VD V+++  +   +D+W ID   TG+QK LS P G+  +  S  A     T K+     +W  Y+    LG +W                        +T    LLY LR AL L+ EEGL+NV +RH+         +E+ GLK      N   ++     ++T V +P  ++   +++     +N+ +  G+   AGKV+RIG +G
Sbjct:  171 KYNCLLMVDCVAALGGVPVFVDDWKIDACYTGTQKCLSGPPGISPLTFSNAACHKIATRKTPVA--NW--YLDCNLLGGYWCPEFNLADGTIAKEEKSTIPKRYHHTTPANLLYSLREALVLLVEEGLDNVWKRHQDAAILLYAGLESLGLKPFVPQLNEAPEKGGRLFSLTTVNIPDGVDGKMVMKYLLDNFNIEIAGGIGAFAGKVWRIGLMG 381          
BLAST of CX295050 vs. ExPASy Swiss-Prot
Match: AGX1_YEAST (Alanine--glyoxylate aminotransferase 1 OS=Saccharomyces cerevisiae GN=AGX1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 60/191 (31.41%), Postives = 90/191 (47.12%), Query Frame = 1
Query:   58 FLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPK----ALEASKTAKSVRVFFD----WKDYIKFYNLGT-FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAG-KVFRIGHLG 600
            F+VD V SI   +F  DEWG+D ALT SQKA+  P G+ I   S +    AL  SK    V  +F     W   ++ Y  G   +  TP +QL+  L  AL  I EEGL    + HR +    + ++   GL+  T    + S+     +   ++     V    + + + +  G++K  G K  RIGH+G
Sbjct:  172 FVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNG-HVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSL-VNGLQ-LTSVSRYPSNMSAHGLTAVYVADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMG 359          
The following BLAST results are available for this feature:
BLAST of CX295050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
SPYA_PONAB2.025e-1833.68Serine--pyruvate aminotransferase OS=Pongo abelii ... [more]
SPYA_HUMAN7.696e-1833.33Serine--pyruvate aminotransferase OS=Homo sapiens ... [more]
SPYA_RABIT8.509e-1731.61Serine--pyruvate aminotransferase OS=Oryctolagus c... [more]
SPYA_CALJA1.451e-1631.25Serine--pyruvate aminotransferase, mitochondrial O... [more]
SPYA_MOUSE6.098e-1530.46Serine--pyruvate aminotransferase, mitochondrial O... [more]
SPYA_DICDI2.317e-1427.91Serine--pyruvate aminotransferase OS=Dictyostelium... [more]
AGX1_YEAST2.398e-1131.41Alanine--glyoxylate aminotransferase 1 OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionC05068A09SK DroRLeaf1 Citrus clementina cDNA clone C05068A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295050 ID=CX295050; Name=CX295050; organism=Citrus clementina; type=EST; length=733bp
GAGGCACAACTTGTCTAAGTGAGAAAACTTCTTGATGAATACAGGCACCC
GGCTCTTTTTCTCGTTGACGGGGTTTCCTCCATTTGTGCCATCGATTTCC
GTATGGATGAATGGGGCATAGATGTGGCTCTAACTGGCTCTCAGAAAGCT
CTTTCACTTCCTACTGGAATGGGGATTGTTTGTGCAAGCCCCAAAGCTCT
AGAGGCATCCAAAACTGCAAAATCTGTCAGAGTTTTCTTTGATTGGAAAG
ACTACATAAAGTTTTACAATTTGGGAACATTTTGGCCATATACCCCTTCC
ATCCAACTGCTGTATGGGCTGCGAGCAGCTTTGGATCTGATTTTTGAGGA
AGGGCTTGAAAATGTGATCGAAAGGCACCGTCGTTTGGGCAAAGCAACCA
GGCTTGCGGTGGAGGCATGGGGATTAAAGAACTGCACCCAGAAAGAAGAA
TGGTTCAGTGACACCGTGACTGCTGTGATTGTTCCTCCACATATCAATAG
TTCAGAAATTGTTAGAAGGGCATGGCAGAGATACAATCTAAGCTTAGGTC
TGGGCCTTAACAAAGTTGCTGGTAAAGTATTTAGAATCGGGCATCTCGGC
CACCTGAATGAGTTGCAATTGTTGGGCTGTCTCGCTGGTGTGGAGATGAT
ACTAAAAGACGTGGGCTACCCGGTTAAGCTGGGGAGCGGGGTTGCAGCTG
CTTCTGCATACCTACAGAACAACATTCCTATGA
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