CX295058

Overview
NameCX295058
Unique NameCX295058
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19
Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = 1 
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVN-APKCPHRNNHYDG 522
            +F LV  NGK      HW+P  G   L   EEA +       +  ++L++SI      + +L IQ++  +++ +  F+  +VTK     ++PL   G+LV NKNI   F E     F PG +V G+ ++ D +LQ R+F+Y DTQ +R GPN   L  N  P+ P  NN+ DG
Sbjct:  214 SFRLVTDNGKQFQCSNHWQPLQGFIDL-GVEEAWRFPEEGEGYVAENLFESIELLTVGDEELEIQSMSFNNDLRERFNSSEVTKSSVVRLVPLITQGKLVFNKNIQMLFNEVIGAMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGPNIQQLGFNRPPRAPIHNNNRDG 385
The following BLAST results are available for this feature:
BLAST of CX295058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CAT1_PENJA6.506e-1935.26Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05068B05SK DroRLeaf1 Citrus clementina cDNA clone C05068B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295058 ID=CX295058; Name=CX295058; organism=Citrus clementina; type=EST; length=702bp
TGTTCAACTTTTACACTGGTCAATAAGAACGGGAAAGTGCACTATGTGAA
ATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTTTGATAGATGATGAAG
AAGCAGTAAAGGTTGGTGGATCTAATCACAGCCACGCTACTCAGGATCTC
TACGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTACATTCA
GACTATTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACTGGACG
TAACCAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGC
TTGGTCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCT
TGCATTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATA
AGATGCTCCAATGTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGC
CTTGGACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCA
TCGCAACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGG
AGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGA
TATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCAT
TGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGG
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