CX295058

Overview
NameCX295058
Unique NameCX295058
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43
Identity = 88/191 (46.07%), Postives = 127/191 (66.49%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLG-PNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRY 576
            TF  VN   +  +VKFHWKP  G++ ++ +E AVK+ G++     +D++ +I +GN+PEW L++Q  D D  D+FDFD LD TK  PE+++P +PVGRLVL++  +NFFAE E +AF    V PGI +S+D +LQ R F+Y DTQ  RLG PN+  LP+NAPKCP ++   DG M   +    V+Y P+ +
Sbjct:  236 TFRFVNAKDESTFVKFHWKPKLGLQSVVWNE-AVKINGADPDFHRRDMWQAIQSGNFPEWDLHVQLFDQDFADKFDFDILDPTKIIPEEVLPTKPVGRLVLDRMPENFFAETEQVAFMTQNVPPGIDFSDDPLLQGRNFSYLDTQLKRLGSPNFTHLPINAPKCPFQHFQQDGHMAMRNPVGRVNYQPNSW 425          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43
Identity = 96/232 (41.38%), Postives = 136/232 (58.62%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-CPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKEN-NFKQPGERYR 693
            T+   N+ G+  +V++H+K   G+K L   EEA K+GGS+  HAT+DLY++I  G+YP W L +Q + P+  + + FD  D+TK WP    P   +G+LVLN+N  N+FAE E  AF+P  +VPGI  S DKMLQ R+F+Y DT  HRLGPNY ++PVNAPK  P  +   DGFM    +     +Y+P+ +        Y  P   ++G   +      N +F Q G  YR
Sbjct:  202 TYKWYNEKGEYFWVQYHFKTDQGIKNLTL-EEAEKIGGSDPDHATRDLYEAIKKGDYPSWTLEMQIMTPEQAEDYRFDIRDITKVWPHGDFPTMKIGKLVLNRNPTNYFAEVEQAAFSPANLVPGIGISPDKMLQGRVFSYHDTHIHRLGPNYNLIPVNAPKYSPENSYQRDGFMRVDANGGSGPNYWPNSFGGPSPDSVYLEPPFGVSGLAARTLYTHPNDDFVQAGNLYR 432          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_VIBVU (Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.439e-42
Identity = 96/234 (41.03%), Postives = 131/234 (55.98%), Query Frame = 1
Query:   19 VNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTR--------HAERYPIPSDVITGRREKACIEKENNFKQPGERYRS 696
            +N+ G+V+YVKFHWK   GVK L    E  KV G + +H T DLY  I AGN+P+W LY++ + P    + D++ LD TK W +  +P + VG + LN+  DNFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LPVN+PK P  N++ DG  N       VD     Y+P+R         A     P   ++G  ++  I    +F Q G  YRS
Sbjct:  220 INRKGEVNYVKFHWKSQQGVKSL-RPAEVTKVQGEDFNHLTNDLYTQINAGNFPKWDLYVKVLSPKALSKLDYNGLDATKVWLD--VPEKKVGTMTLNRVPDNFFLETEQSAFAPSNIIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETP---LSGHVQQQAIRNPRDFFQAGVLYRS 447          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.880e-42
Identity = 96/234 (41.03%), Postives = 131/234 (55.98%), Query Frame = 1
Query:   19 VNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTR--------HAERYPIPSDVITGRREKACIEKENNFKQPGERYRS 696
            +N+ G+V+YVKFHWK   GVK L    E  KV G + +H T DLY  I AGN+P+W LY++ + P    + D++ LD TK W +  +P + VG + LN+  DNFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LPVN+PK P  N++ DG  N       VD     Y+P+R         A     P   ++G  ++  I    +F Q G  YRS
Sbjct:  220 INQKGEVNYVKFHWKSQQGVKSL-RPAEVTKVQGEDFNHLTNDLYTQINAGNFPKWDLYVKVLSPKALSKLDYNGLDATKVWLD--VPEKKVGTMTLNRVPDNFFLETEQSAFAPSNIIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETP---LSGHVQQQAIRNPRDFFQAGVLYRS 447          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 1.880e-42
Identity = 92/200 (46.00%), Postives = 123/200 (61.50%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTRH 591
            TF LVN NG+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA GNYP W  YIQ +     + F F+P DVTK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+F+Y DT RHRLGPNYL +PVN   CP+R    N   DG M    ++    +Y+P+ +    H
Sbjct:  219 TFKLVNANGEAVYCKFHYKTDQGIKNL-SVEDAARLSQEDPDYGLRDLFNAIATGNYPSWTFYIQVMTFSQAETFPFNPFDVTKIWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFSYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEH 414          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 4.188e-42
Identity = 94/196 (47.96%), Postives = 125/196 (63.78%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 576
            TF LVN NG+  Y KFH+K   G+K L   EEA ++   +  +  +DL+++IA+GNYP W  YIQ +     + F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  219 TFKLVNANGEAVYCKFHYKTDQGIKNL-PVEEAGRLAQEDPDYGLRDLFNAIASGNYPSWTFYIQVMTFKEAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPANYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.188e-42
Identity = 98/229 (42.79%), Postives = 134/229 (58.52%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDG-FMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQP 678
            TF LVNK+G   Y KFH K   G++ L  D  A+K+ G +  ++ +DLYDSI  GNYP W+L IQ +  +    + F+P D+TK W     PL  VG++VLNKN  N+FAE E +AF P  VVPGI +S DKMLQ R+FAY DTQ HRLGPNY+ LP+N   CP+R    N   DG F    ++     Y P+ ++           +  ++G  ++   + E+NF QP
Sbjct:  218 TFKLVNKDGNAVYCKFHIKTAQGIRNLPPDV-AIKLAGEDPDYSIRDLYDSIENGNYPVWRLMIQVMTFEEAANYRFNPFDITKVWSHKEFPLILVGKIVLNKNPTNYFAEVEQIAFAPSHVVPGIEFSPDKMLQGRLFAYPDTQFHRLGPNYVQLPIN---CPYRSRAHNTQRDGCFALDYNQGGMPTYHPNSFNGAIERTDVKESAWSVSGDVDRFNGDDEDNFSQP 442          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATE_PSEAE (Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.469e-42
Identity = 86/172 (50.00%), Postives = 116/172 (67.44%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYD 519
            TF LVN  G+   VKFHW+P  G   L+ DE A K+ G +     + L++ I  G+YPEW+L +Q I  + +D FDFD LD TK  PE+++P++ VGR+VLN+N DNFFAE E +AF+ G VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  +P+N P CP  NN  D
Sbjct:  238 TFRLVNAAGESVLVKFHWRPKSGTCSLVWDE-AQKLAGKDPDFNRRTLWEDIEKGDYPEWELGLQVIPENQQDSFDFDLLDPTKLVPEELVPVRVVGRMVLNRNPDNFFAETEQVAFHVGHVVPGIDFTNDPLLQGRLFSYTDTQLLRLSGPNFNEIPINRPLCPFHNNQRD 408          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_SCHPO (Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.329e-42
Identity = 85/200 (42.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYP 606
            T+  VN  G+ +Y K+H+    G K L + EEA  + GSN  HA QDL+++I  G+YP W LY+Q + P   +++ ++  D+TK WP   +P+Q VGR  LN+N  NFFA+ E   F+P  +VPGI  S D +LQ R F+Y DT RHRLG N+  +PVN+PKCP  N   DG MN          +PS   P    +  P
Sbjct:  205 TYKFVNDKGEFYYCKWHFITNQGTKGLTN-EEAAALDGSNPDHARQDLFEAIERGDYPSWTLYVQVMTPQEAEKYRYNIFDLTKVWPHKDVPMQRVGRFTLNQNPTNFFADIEQAGFSPSHMVPGIEVSADPVLQVRTFSYPDTHRHRLGANFEQIPVNSPKCPVFNYSRDGPMNVNGNQGNWPNYPSSIRPLAKVQYEP 403          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.714e-41
Identity = 94/237 (39.66%), Postives = 137/237 (57.81%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACI-------EKENNFKQPGERYRS 696
            TF+L+N  G+  +VKFH++   GVK L + EEA +V   +     +DL+D+IA G++P+WK+ IQ +  +   ++ F P DVTK W     PL  VG + LNKN +N+FAE E  AF P  VVPGI YS D+MLQ R+F+YGDT R+RLG NY  +PVN P+CP  ++  DG+M   +     +Y PS     +  +    P   +    ++  +       E  + + QPG+ YRS
Sbjct:  200 TFSLINAKGERFWVKFHFETMQGVKHLTN-EEAAEVRKYDPDSNQRDLFDAIAGGDFPKWKMSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNRPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRAEDSDYYTQPGDYYRS 435          
The following BLAST results are available for this feature:
BLAST of CX295058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATE_RHIME2.900e-4346.07Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATA_METBF2.900e-4341.38Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]
CATA_VIBVU1.439e-4241.03Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=... [more]
CATA_VIBVY1.880e-4241.03Catalase OS=Vibrio vulnificus (strain YJ016) GN=VV... [more]
CATA_CALJA1.880e-4246.00Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATA_RAT4.188e-4247.96Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]
CATA_ASCSU4.188e-4242.79Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATE_PSEAE5.469e-4250.00Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE... [more]
CATA_SCHPO9.329e-4242.50Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1... [more]
CATA_HELPJ2.714e-4139.66Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionC05068B05SK DroRLeaf1 Citrus clementina cDNA clone C05068B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295058 ID=CX295058; Name=CX295058; organism=Citrus clementina; type=EST; length=702bp
TGTTCAACTTTTACACTGGTCAATAAGAACGGGAAAGTGCACTATGTGAA
ATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTTTGATAGATGATGAAG
AAGCAGTAAAGGTTGGTGGATCTAATCACAGCCACGCTACTCAGGATCTC
TACGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTACATTCA
GACTATTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACTGGACG
TAACCAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGC
TTGGTCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCT
TGCATTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATA
AGATGCTCCAATGTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGC
CTTGGACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCA
TCGCAACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGG
AGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGA
TATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCAT
TGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGG
CC
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