CX295058

Overview
NameCX295058
Unique NameCX295058
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_MOUSE (Catalase OS=Mus musculus GN=Cat PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40
Identity = 93/196 (47.45%), Postives = 123/196 (62.76%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 576
            TF LVN +G+  Y KFH+K   G+K L    EA ++   +  +  +DL+++IA GNYP W  YIQ +     + F F+P D+TK WP    PL PVG+LVLNKN  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  219 TFKLVNADGEAVYCKFHYKTDQGIKNL-PVGEAGRLAQEDPDYGLRDLFNAIANGNYPSWTFYIQVMTFKEAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNKNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 3.920e-40
Identity = 89/195 (45.64%), Postives = 121/195 (62.05%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRY 576
            TF LVN NG+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA   YP W  YIQ +  +  + F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M    ++    +Y+P+ +
Sbjct:  219 TFKLVNANGEAVYCKFHYKTDQGIKNL-SVEDAARLSQEDPDYGIRDLFNAIATEKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVN---CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSF 409          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_PIG (Catalase OS=Sus scrofa GN=CAT PE=1 SV=4)

HSP 1 Score: 164.851 bits (416), Expect = 3.920e-40
Identity = 87/192 (45.31%), Postives = 119/192 (61.98%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRY 576
            TF LVN+ G+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA GNYP W  YIQ +     + F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+F Y DT RHRLG NYL +PVN P +    N   DG M F  ++    +Y+P+ +
Sbjct:  219 TFKLVNEKGEAVYCKFHYKTDQGIKNL-SVEDAARLPQEDPDYGIRDLFNAIATGNYPSWTFYIQVMTFQEAEAFPFNPFDLTKVWPHSEYPLIPVGKLVLNRNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFGYPDTHRHRLGANYLQIPVNCPFRARVANYQRDGPMCFQDNQGGAPNYYPNSF 409          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_DROME (Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.140e-39
Identity = 84/200 (42.00%), Postives = 124/200 (62.00%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAER 600
            TF L+N  G+  Y KFH+K   G+K L D + A ++  ++  ++ +DLY+ I    +P W +YIQ +  +   +F ++P DVTK W +   PL PVG++VL++N  N+FAE E +AF+P  +VPG+  S DKML  R+F+Y DT RHRLGPNYL +PVN P K    N   DG MN   ++D   +YFP+ ++  +   R
Sbjct:  217 TFKLINAKGEPIYAKFHFKTDQGIKNL-DVKTADQLASTDPDYSIRDLYNRIKTCKFPSWTMYIQVMTYEQAKKFKYNPFDVTKVWSQKEYPLIPVGKMVLDRNPKNYFAEVEQIAFSPAHLVPGVEPSPDKMLHGRLFSYSDTHRHRLGPNYLQIPVNCPYKVKIENFQRDGAMNVTDNQDGAPNYFPNSFNGPQECPR 415          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.489e-39
Identity = 82/193 (42.49%), Postives = 119/193 (61.66%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF--MHRDEEVDYFPSRYD 579
            TF+ +N N +  +VKFH+K   G++ L +  EA +V   +   + +DLY+SI  G++P WK+Y+Q +       + ++P D+TK WP    PL  VG   LN+N DN+FAE E  AF P  VVPGI +S DKMLQ R+F+YGD  R+RLG N+  +PVNA +CPH+  H DG M     +  + V Y P+ ++
Sbjct:  199 TFSFINANNERFWVKFHFKTQQGIENLTN-AEAAEVIAQDRESSQRDLYESIEKGDFPRWKMYVQIMPEKEAATYRYNPFDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFN 390          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.541e-39
Identity = 91/235 (38.72%), Postives = 127/235 (54.04%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRY-----DPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYR 693
            T++ +N   K  +VKFH K   G+K L D E    +     SH  +DLY+SI  G++P+WK  IQ +  +  D +  +P D+TK WP    PLQ VG L LN+N +N+FAE E  AFNP  +V GI +S DKMLQ R+F+YGD QR+RLG N   +PVN P+CP    H DG M    +      Y P+ Y      P +      +  DV      +     ++ + QPG+ +R
Sbjct:  198 TYSFLNAENKRIWVKFHLKTMQGIKNLTDQEAEAIIAKDRESHQ-RDLYESIERGDFPKWKFQIQLMTEEEADNYRINPFDLTKVWPHKDFPLQDVGILELNRNPENYFAEVEQSAFNPMNIVEGIGFSPDKMLQGRLFSYGDAQRYRLGVNSEQIPVNKPRCPFHAFHRDGAMRVDGNYGSAKGYEPNSYGEWQDSPEKKEPPLKVHGDVFNYNERE---YDDDYYSQPGDLFR 428          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_VIBF1 (Catalase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=katA PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.334e-39
Identity = 95/234 (40.60%), Postives = 129/234 (55.13%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM----NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREK-ACIEKENNFKQPGERYR 693
            TF+ +N + +  +VKFH+K   G+K L D E A  +G    SH  +DL +SI   ++P+W L +Q +         ++P D+TK WP    PL  VG   LN+N  NFFAE E  AFNP  VVPGI +S DKMLQ R+FAYGD QR+RLG N+  +PVNAP+CP  + H DG M    NF      + Y P+          +  P+  + G        E E+ F QPG+ +R
Sbjct:  197 TFSFINSDNERFWVKFHFKSQQGIKNLSDAEAAQVIGQDRESHQ-RDLLESIDNQDFPKWTLKVQIMPEADAATVPYNPFDLTKVWPHKDYPLIEVGEFELNRNPQNFFAEVEQSAFNPANVVPGISFSPDKMLQGRLFAYGDAQRYRLGVNHQHIPVNAPRCPVHSYHRDGAMRVDGNF---GSTLGYEPNNEGQWAEQPDFAEPALNLDGAAAHWDHREDEDYFSQPGDLFR 426          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.392e-39
Identity = 90/196 (45.92%), Postives = 123/196 (62.76%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 576
            TF LVN  G+  Y KFH+K   G+K  I  EEA ++  ++  ++ +DLY++IA GN+P W  YIQ +  +  + + ++P D+TK W     PL PVGR VLN+N  N+FAE E LAF+P  + PGI  S DKMLQ R+F+Y DT RHRLG NYL LPVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  219 TFKLVNAQGQPVYCKFHYKTNQGIKN-IPVEEADRLAATDPDYSIRDLYNAIANGNFPSWTFYIQVMTFEQAENWKWNPFDLTKVWSHKEFPLIPVGRFVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVN---CPYRTRVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.392e-39
Identity = 83/226 (36.73%), Postives = 132/226 (58.41%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPT-RHAERYPIPSDVITGRREKACIEKENNFKQP 678
            T++ +N   +  +VKFH+K   G+K L + E A  +     SH  +DLY++I   ++P+WK+ +Q +     ++  F+P D+TK WP  ++PL  +G ++LNKN  N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D QR+R+G NY +LPVN  K      +  G MNF  ++++   Y P+ YD + +  + Y  P  V+ G  ++      + + QP
Sbjct:  195 TYSFINDKNERFWVKFHFKTQQGIKNLTNQEAAELIAKDRESHQ-RDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLTKIWPHSLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDKSYLEPDLVLEGVAQRYAPLDNDFYTQP 419          
BLAST of CX295058 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 160.614 bits (405), Expect = 7.392e-39
Identity = 87/230 (37.83%), Postives = 131/230 (56.96%), Query Frame = 1
Query:    7 TFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYR 693
            TF   N  G+  ++K+H+K   GVK L D   A K+ G N  + T+DL+++I  G+YP WKLY+Q +  +  + + FDP DVTK W +   PL  VGR+VL++N +N+FAE E   F+PG +VPGI  S DKMLQ R+FAY D  R+R+G N+  LP+N  +    N   DG M F  +    V Y P+ +   + +      +  + G  +    +  +++ Q G+ YR
Sbjct:  198 TFKWTNAEGEGVWIKYHFKTEQGVKNL-DVNTAAKIAGENPDYHTEDLFNAIENGDYPAWKLYVQIMPLEDANTYRFDPFDVTKVWSQKDYPLIEVGRMVLDRNPENYFAEVEQATFSPGTLVPGIDVSPDKMLQGRLFAYHDAHRYRVGANHQALPINRARNKVNNYQRDGQMRFDDNGGGSVYYEPNSFGGPKESPEDKQAAYPVQGIADSVSYDHYDHYTQAGDLYR 426          
The following BLAST results are available for this feature:
BLAST of CX295058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_MOUSE1.347e-4047.45Catalase OS=Mus musculus GN=Cat PE=1 SV=3[more]
CATA_PONAB3.920e-4045.64Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]
CATA_PIG3.920e-4045.31Catalase OS=Sus scrofa GN=CAT PE=1 SV=4[more]
CATA_DROME1.140e-3942.00Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV... [more]
CATA_PSEAE1.489e-3942.49Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATA_BACFR2.541e-3938.72Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CATA_VIBF14.334e-3940.60Catalase OS=Vibrio fischeri (strain ATCC 700601 / ... [more]
CATA_DANRE7.392e-3945.92Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]
CATA_CAMJE7.392e-3936.73Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATA_BACSU7.392e-3937.83Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]

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Properties
Property NameValue
Genbank descriptionC05068B05SK DroRLeaf1 Citrus clementina cDNA clone C05068B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295058 ID=CX295058; Name=CX295058; organism=Citrus clementina; type=EST; length=702bp
TGTTCAACTTTTACACTGGTCAATAAGAACGGGAAAGTGCACTATGTGAA
ATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTTTGATAGATGATGAAG
AAGCAGTAAAGGTTGGTGGATCTAATCACAGCCACGCTACTCAGGATCTC
TACGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTACATTCA
GACTATTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACTGGACG
TAACCAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGC
TTGGTCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCT
TGCATTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATA
AGATGCTCCAATGTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGC
CTTGGACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCA
TCGCAACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGG
AGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGA
TATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCAT
TGAGAAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGG
CC
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