CX295060

Overview
NameCX295060
Unique NameCX295060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295060 vs. ExPASy Swiss-Prot
Match: FER_MOUSE (Proto-oncogene tyrosine-protein kinase Fer OS=Mus musculus GN=Fer PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 52/152 (34.21%), Postives = 82/152 (53.95%), Query Frame = 1
Query:    7 LIAELQHRNLVRILGCCVEQGEKILILEYMPNKSLDVYLFDPIKKRLLDWEARIRIIQGIAQGLLYLHQYSRLRIIHRDLKASNVLLDKDMNPKISDFGLARM-FGGDELQGNTKRIVGTYGYMSPEYALDGLFSIKSDVFSFGILMLETLS 459
            ++ +  H N+V+++G C ++    +I+E +P    D   F   +K  L  +  +R    +A G+LYL   +    IHRDL A N L+ ++   KISDFG++R   GG       K+I     + +PE    G +S +SDV+SFGIL+ ET S
Sbjct:  612 ILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGG--DFLTFLRKRKDELKLKQLVRFSLDVAAGMLYLESKN---CIHRDLAARNCLVGENNTLKISDFGMSRQEDGGVYSSSGLKQI--PIKWTAPEALNYGRYSSESDVWSFGILLWETFS 756          
BLAST of CX295060 vs. ExPASy Swiss-Prot
Match: EPHB1_RAT (Ephrin type-B receptor 1 OS=Rattus norvegicus GN=Ephb1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 58/232 (25.00%), Postives = 109/232 (46.98%), Query Frame = 1
Query:    7 LIAELQHRNLVRILGCCVEQGEKILILEYMPNKSLDVYLFDPIKKRLLDWEARI----RIIQGIAQGLLYLHQYSRLRIIHRDLKASNVLLDKDMNPKISDFGLARMFGGDELQGNTKRIVG---TYGYMSPEYALDGLFSIKSDVFSFGILMLETLSSRKNTGVYNTDSFNLLGHAWDLWKHERVHELMDPVILQDEIPLPMLMRYVNVALLCVQENAADRPTMSDVVSMI 681
            ++ +  H N++R+ G   +    ++I E+M N +LD +L      R  D +  +     +++GIA G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D         +G      + +PE      F+  SDV+S+GI+M E +S  +                WD+   + ++ +     L   +  P  +    + L C Q++   RP  +++V+ +
Sbjct:  671 IMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFL------RQNDGQFTVIQLVGMLRGIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERP-------------YWDMSNQDVINAIEQDYRLPPPMDCPAALH--QLMLDCWQKDRNSRPRFAEIVNTL 878          
BLAST of CX295060 vs. ExPASy Swiss-Prot
Match: EPHB1_MOUSE (Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 58/232 (25.00%), Postives = 109/232 (46.98%), Query Frame = 1
Query:    7 LIAELQHRNLVRILGCCVEQGEKILILEYMPNKSLDVYLFDPIKKRLLDWEARI----RIIQGIAQGLLYLHQYSRLRIIHRDLKASNVLLDKDMNPKISDFGLARMFGGDELQGNTKRIVG---TYGYMSPEYALDGLFSIKSDVFSFGILMLETLSSRKNTGVYNTDSFNLLGHAWDLWKHERVHELMDPVILQDEIPLPMLMRYVNVALLCVQENAADRPTMSDVVSMI 681
            ++ +  H N++R+ G   +    ++I E+M N +LD +L      R  D +  +     +++GIA G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D         +G      + +PE      F+  SDV+S+GI+M E +S  +                WD+   + ++ +     L   +  P  +    + L C Q++   RP  +++V+ +
Sbjct:  671 IMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFL------RQNDGQFTVIQLVGMLRGIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERP-------------YWDMSNQDVINAIEQDYRLPPPMDCPAALH--QLMLDCWQKDRNSRPRFAEIVNTL 878          
BLAST of CX295060 vs. ExPASy Swiss-Prot
Match: EPHA5_HUMAN (Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 59/228 (25.88%), Postives = 110/228 (48.25%), Query Frame = 1
Query:    7 LIAELQHRNLVRILGCCVEQGEKILILEYMPNKSLDVYLFDPIKKRLLDWEA--RIRIIQGIAQGLLYLHQYSRLRIIHRDLKASNVLLDKDMNPKISDFGLARMFGGD-ELQGNTKRIVGTYGYMSPEYALDGLFSIKSDVFSFGILMLETLSSRKNTGVYNTDSFNLLGHAWDLWKHERVHELMDPVILQDEIPLPMLMRYVNVALLCVQENAADRPTMSDVVSMI 681
            ++ +  H N++ + G   +    +++ EYM N SLD +L    KK    +     + +++GI+ G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R+   D E    T+       + +PE      F+  SDV+S+GI+M E +S       Y    +      W++   + +  + +   L   +  P  +    + L C Q+    RP   ++V+M+
Sbjct:  727 IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL----KKNDGQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS-------YGERPY------WEMTNQDVIKAVEEGYRLPSPMDCPAAL--YQLMLDCWQKERNSRPKFDEIVNML 932          
BLAST of CX295060 vs. ExPASy Swiss-Prot
Match: ABL1_CAEEL (Tyrosine-protein kinase abl-1 OS=Caenorhabditis elegans GN=abl-1 PE=1 SV=4)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 58/169 (34.32%), Postives = 84/169 (49.70%), Query Frame = 1
Query:    7 LIAELQHRNLVRILGCCVEQGEKILILEYMPNKSLDVYLFDPIKKRLLDWEARIRIIQGIAQGLLYLHQYSRLRIIHRDLKASNVLLDKDMNPKISDFGLARMFGGDELQGNTKRIVGTYGYMSPEYALDGLFSIKSDVFSFGILMLE--TLSSRKNTGVYNTDSFNLL 507
            ++ +L H+NLVR+LG C  +    +I E+M N +L  YL     K LL     +++   IA G+ YL        IHRDL A N L+ +    KI+DFGLAR    D    +         + +PE      FS KSDV++FG+L+ E  T       GV  ++ + LL
Sbjct:  358 IMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYL-RRTDKSLLPPIILVQMASQIASGMSYL---EARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYTAHAGAKF-PIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLL 521          
BLAST of CX295060 vs. ExPASy Swiss-Prot
Match: TAOK2_XENLA (Serine/threonine-protein kinase TAO2 OS=Xenopus laevis GN=taok2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 68/223 (30.49%), Postives = 104/223 (46.64%), Query Frame = 1
Query:   10 IAELQHRNLVRILGCCVEQGEKILILEYMPNKSLDVYLFDPIKKRLLDWEARIRIIQGIAQGLLYLHQYSRLRIIHRDLKASNVLLDKDMNPKISDFGLARMFGGDELQGNTKRIVGTYGYMSPEYAL---DGLFSIKSDVFSFGILMLETLSSRKNTGVYNTDSFNLLGHAWDLWKHERVHELMDPVILQDEIPLPMLMR----YVNVALLCVQENAADRPT 657
            + +L+H N +   GC + +    L++EY    + D  L +  KK L + E    I  G  QGL YLH ++   +IHRD+KA N+LL +    K+ DFG A       +       VGT  +M+PE  L   +G +  K DV+S GI  +E L+ RK   ++N ++ + L H                 I Q+E P+         + N    C+Q+   DRPT
Sbjct:   80 LQKLRHPNTIEYKGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEMEIAA-ITHGALQGLAYLHNHN---MIHRDVKAGNILLTEPGLVKLGDFGSA------SIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITSIE-LAERK-PPLFNMNAMSALYH-----------------IAQNESPVLQSNHWSEYFRNFVDSCLQKIPQDRPT 271          
BLAST of CX295060 vs. ExPASy Swiss-Prot
Match: STE7_YEAST (Serine/threonine-protein kinase STE7 OS=Saccharomyces cerevisiae GN=STE7 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 65/231 (28.14%), Postives = 110/231 (47.62%), Query Frame = 1
Query:   25 HRNLVRILGCCVEQ---GEKILILEYMPNKSLDVYLFDPIKKRLLD---------WEARI---RIIQGIAQGLLYLHQYSRLRIIHRDLKASNVLLDKDMNPKISDFGLARMFGGDELQGNTKRIVGTYGYMSPEYALDGLFSIKSDVFSFGILMLETLSSRKNTGVYNTDSFNLLGHAWDLWKHERVHELMDPVILQDEIPLPMLMRYVNVALLCVQENAADRPTMSDVV 672
            H N++   G    Q    E I+++EY    SLD  L   + KR +          W   +   +I  G+  GL +L  Y + +IIHRD+K SNVL++     K+ DFG+++      +       VGT  YMSPE     ++SIK DV+S G++++E ++     G +N     +L    DL   +R+     P + +D I    +  +VN    C  +N  +R ++ +++
Sbjct:  248 HENIITFYGAYYNQHINNEIIILMEYSDCGSLDKIL--SVYKRFVQRGTVSSKKTWFNELTISKIAYGVLNGLDHL--YRQYKIIHRDIKPSNVLINSKGQIKLCDFGVSKKL----INSIADTFVGTSTYMSPERIQGNVYSIKGDVWSLGLMIIELVTGEFPLGGHNDTPDGIL----DLL--QRIVNEPSPRLPKDRIYSKEMTDFVN---RCCIKNERERSSIHELL 461          
BLAST of CX295060 vs. ExPASy Swiss-Prot
Match: SRC_RSVP (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain Prague C) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 58/156 (37.18%), Postives = 90/156 (57.69%), Query Frame = 1
Query:    7 LIAELQHRNLVRILGCCVEQGEKILILEYMPNKSLDVYLFDPIKK-----RLLDWEARIRIIQGIAQGLLYLHQYSRLRIIHRDLKASNVLLDKDMNPKISDFGLARMFGGDEL---QGNTKRIVGTYGYMSPEYALDGLFSIKSDVFSFGILMLE 450
            ++ +L+H  LV++     E+   I+I EYM   SL  +L   + K     +L+D  A+I      A G+ Y+    R+  +HRDL+A+N+L+ +++  K++DFGLAR+   +E    QG    I  T    +PE AL G F+IKSDV+SFGIL+ E
Sbjct:  313 VMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI------ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTE 454          
BLAST of CX295060 vs. ExPASy Swiss-Prot
Match: PLK4_DROVI (Serine/threonine-protein kinase PLK4 OS=Drosophila virilis GN=SAK PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 1
Query:   13 AELQHRNLVRILGCCVEQGEKILILEYMPNKSLDVYLFDPIKKRLLDWEARIRIIQGIAQGLLYLHQYSRLRIIHRDLKASNVLLDKDMNPKISDFGLARMFGGDELQGNTKRIVGTYGYMSPEYALDGLFSIKSDVFSFGILMLETLSSR 465
            + L+H +++++     +     LILE   N  L  Y+   +K+   + EA   I++ +  GLLYLH ++   I+HRD+  SN+LL KDM+ KI+DFGLA      + +  T  + GT  Y+SPE        + +D++S G ++   L  R
Sbjct:   67 SRLKHPSVLQLYTFFQDANYVYLILELADNGELHRYMNQQMKRPFTEQEAA-SILRQVVDGLLYLHSHN---IMHRDISMSNLLLSKDMHVKIADFGLATQLKRPDERHMT--MCGTPNYISPEVVSHQSHGLPADLWSVGCMLYTLLVGR 211          
BLAST of CX295060 vs. ExPASy Swiss-Prot
Match: PLK4_CULQU (Serine/threonine-protein kinase PLK4 OS=Culex quinquefasciatus GN=SAK PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 66/244 (27.05%), Postives = 119/244 (48.77%), Query Frame = 1
Query:   13 AELQHRNLVRILGCCVEQGEKILILEYMPNKSLDVYLFDPIKKRLLDWEARIRIIQGIAQGLLYLHQYSRLRIIHRDLKASNVLLDKDMNPKISDFGLARMFGGDELQGNTKRIVGTYGYMSPEYALDGLFSIKSDVFSFGILMLETLSSR---KNTGVYNTDSFNLLGHAWDLWKH--ERVHELMDPVILQ--------DEIPLPMLMRYVNVALLCVQENAADRPTMSDVVSMISNEHLNLP 705
            + L+H +++ +     +     L+LE   N  L  YL D  KK   ++EA   +++ + +GLLYLH +   +I+HRD+  +N+LL K+M  KI DFGLA      + +  T  + GT  Y+SPE A      + +DV+  G ++   L  R      GV +T +  ++ + + L  H  +   +L+D ++ +        D++PL   M+  +    C     A   + S ++++ S    N+P
Sbjct:   65 SRLKHPSILELYTFFEDANFVYLVLELAENGELQRYLRDT-KKTFNEYEAAT-VLKQVVEGLLYLHSH---QILHRDMSLANLLLTKEMTVKICDFGLATQLSRPDEKHMT--LCGTPNYISPEVASRASHGLPADVWGLGCMLYTFLVGRPPFDTDGVKSTLTKVVMSN-YTLPSHISQEARDLIDRLLKKNPAERIKLDQVPLHPFMQKASSFEKCQGGTLAS--SDSGIMTISSGNRSNIP 298          
The following BLAST results are available for this feature:
BLAST of CX295060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FER_MOUSE2.503e-1334.21Proto-oncogene tyrosine-protein kinase Fer OS=Mus ... [more]
EPHB1_RAT2.503e-1325.00Ephrin type-B receptor 1 OS=Rattus norvegicus GN=E... [more]
EPHB1_MOUSE2.503e-1325.00Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 ... [more]
EPHA5_HUMAN2.503e-1325.88Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 ... [more]
ABL1_CAEEL2.503e-1334.32Tyrosine-protein kinase abl-1 OS=Caenorhabditis el... [more]
TAOK2_XENLA3.269e-1330.49Serine/threonine-protein kinase TAO2 OS=Xenopus la... [more]
STE7_YEAST3.269e-1328.14Serine/threonine-protein kinase STE7 OS=Saccharomy... [more]
SRC_RSVP3.269e-1337.18Tyrosine-protein kinase transforming protein Src O... [more]
PLK4_DROVI3.269e-1332.45Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_CULQU3.269e-1327.05Serine/threonine-protein kinase PLK4 OS=Culex quin... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05068B07SK DroRLeaf1 Citrus clementina cDNA clone C05068B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295060 ID=CX295060; Name=CX295060; organism=Citrus clementina; type=EST; length=724bp
CGAGGGCTTATAGCAGAACTCCAACACAGAAACCTTGTTAGAATTTTGGG
TTGCTGTGTAGAACAAGGCGAAAAGATTTTAATCCTTGAGTACATGCCTA
ACAAAAGCTTGGATGTTTACCTTTTTGATCCAATTAAGAAGCGCCTATTG
GATTGGGAAGCACGTATTAGAATCATTCAAGGAATTGCTCAAGGACTATT
ATATCTTCATCAATATTCTAGACTGAGAATTATTCATAGAGATCTGAAGG
CAAGTAATGTTCTCTTAGATAAGGACATGAACCCCAAAATCTCCGACTTT
GGCTTGGCAAGAATGTTTGGTGGTGATGAATTGCAAGGAAACACTAAACG
GATTGTTGGAACTTATGGTTATATGTCACCTGAATATGCCCTGGATGGTC
TCTTCTCTATCAAATCGGATGTGTTTAGCTTTGGAATATTGATGTTAGAA
ACATTGAGTAGCAGGAAAAACACTGGCGTCTACAATACTGATTCCTTTAA
TCTTCTTGGTCATGCTTGGGATCTATGGAAACATGAGAGAGTTCATGAAC
TAATGGATCCAGTAATATTACAAGACGAAATACCATTGCCAATGTTGATG
CGATACGTTAATGTTGCTCTTCTATGTGTTCAAGAGAATGCAGCAGACAG
ACCAACTATGTCGGATGTTGTCTCGATGATTAGTAATGAGCATCTTAATT
TACCTTTTCCCAGAAACTTACTTT
back to top