CX295062

Overview
NameCX295062
Unique NameCX295062
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21
Identity = 70/210 (33.33%), Postives = 102/210 (48.57%), Query Frame = 1
Query:  139 VNRRSVADDVELEIFAER--GKKE----SDESNPMIPEQHEETKRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQ-EQWKKAFANSFLKVDSEIGGALG----GEPVAP---------ETAGSTAVVAIISPTLIIVANCG 708
            + R  +A D+EL+   +   GK++    +    P   E     + +  + ++ PR+GV +VCG+R EMEDAV++ P FL               P     HF+GV+DGHG   VA  C +RMH  +AEE          G S +   W+     SF ++D E+G         EP  P         + AGSTAVVA++SPT ++VAN G
Sbjct:   45 MRRIRIASDLELQAGEDGRPGKRQRLARTASGAPRPDEDSASERPSCGRTEEFPRYGVTAVCGRRREMEDAVSIRPDFL---------------PASGKFHFYGVFDGHGCSHVATTCQDRMHEIVAEE-------HNKGASGEVAPWRDVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDHAGSTAVVAVVSPTQVVVANAG 232          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19
Identity = 60/148 (40.54%), Postives = 80/148 (54.05%), Query Frame = 1
Query:  289 GVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGAL--------GGEPVAPETAGSTAVVAIISPTLIIVANCG 708
            G  SV G+R EMEDAVA+   F+   T      +      +    FF VYDGHGG +VA  C +RMH+ LAEE+   + R Q       +WK+A   SF ++D E+ G++        G EP    T GSTAVVA++    I+VANCG
Sbjct:   79 GSVSVIGRRREMEDAVAIERTFMA-STGDGAGAIRGGGEGEE--DFFAVYDGHGGSRVAEACRKRMHVVLAEEVSLRRLRGQSASGGDVRWKEAMLASFARMDGEVVGSVAAAAPRVDGTEPSGFRTVGSTAVVAVVGRRRIVVANCG 223          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C78_ARATH (Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18
Identity = 63/169 (37.28%), Postives = 83/169 (49.11%), Query Frame = 1
Query:  232 EQHEETKRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGGEPVAP----------ETAGSTAVVAIISPTLIIVANCG 708
            E    T  A+   +  P++GV SVCG+R EMEDAVAV P F + QT                 H+ GVYDGHG   VA  C ER+H  + EE                 W+K+ A SF ++D E+  AL  +  A           +  GSTAVV++++P  IIVANCG
Sbjct:   94 ESLSSTVVALPDPEAYPKYGVASVCGRRREMEDAVAVHPFFSRHQTEY----------SSTGFHYCGVYDGHGCSHVAMKCRERLHELVREEFEA-----------DADWEKSMARSFTRMDMEV-VALNADGAAKCRCELQRPDCDAVGSTAVVSVLTPEKIIVANCG 240          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17
Identity = 65/210 (30.95%), Postives = 92/210 (43.81%), Query Frame = 1
Query:  145 RRSVADDVELEIFAERGKKESDESN----------PMIPEQHEETKRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSE-IGGALGGEPVAP-----------ETAGSTAVVAIISPTLIIVANCG 708
            RR   +   L + AERG +E                   E+  E +RA        R+G  SVCG+R +MED+V+  P FL                     HFFGV+DGHG   VA  C +RMH  + +E   A      G   + +W+     SF ++D+E +  + G    AP           +  GSTAVVA++ P  ++VANCG
Sbjct:   29 RRRRMEIRRLRVVAERGAEEETSGKRRRLDGGGGEASTDEEDREVERA--------RYGFTSVCGRRRDMEDSVSACPGFLPGH------------------HFFGVFDGHGCSHVATSCGQRMHEIVVDEAGAAAG--SAGLDEEARWRGVMERSFARMDAEAVASSRGSVAPAPTCRCEMQLPKCDHVGSTAVVAVLGPRHVVVANCG 210          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16
Identity = 55/155 (35.48%), Postives = 76/155 (49.03%), Query Frame = 1
Query:  280 PRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAE---ELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGGEPVAP---------ETAGSTAVVAIISPTLIIVANCG 708
            PR+GV SV G+R EMEDAV++ P FL+  T                 HFFGV+DGHG   VA  C +RMH  + +   + V+ K       +W++  +K FA    +         GGEP            +  GSTAVVA++ P  ++VAN G
Sbjct:   90 PRYGVTSVFGRRREMEDAVSIRPDFLRGST------------SSGKHHFFGVFDGHGCSHVARMCQDRMHELVVDAYKKAVSGKEAAAAAPAWKDVMEKGFARMDDEATIWAKSRTGGEPACRCELQTPARCDHVGSTAVVAVVGPNRVVVANSG 232          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 56/164 (34.15%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  277 VPRWGVNSVCGKRPEMEDAVAVIPAFLQ--IQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSE---------IGGALGG-------EPVAP--ETAGSTAVVAIISPTLIIVANCG 708
            VP+ G  SVCG+R +MEDAV++ P+FLQ   + H                HF+GV+DGHG   VA  C ER+H  + +E+    +         ++W +    SF K+D E         + GA          E  +P  +  GSTAVV++++P  IIV+NCG
Sbjct:  102 VPKIGTTSVCGRRRDMEDAVSIHPSFLQRNSENH----------------HFYGVFDGHGCSHVAEKCRERLHDIVKKEVEVMAS---------DEWTETMVKSFQKMDKEVSQRECNLVVNGATRSMKNSCRCELQSPQCDAVGSTAVVSVVTPEKIIVSNCG 240          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15
Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 1
Query:  283 RWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAK--ARLQDGGSWQEQWKKAFANSFLKVDSEI-------GGALGGEPVAPETAGSTAVVAIISPTLIIVANCG 708
            R G  SV G+R EMEDAV++  AF       +     D         F+GV+DGHG   VA+ C ERMH  +AEE+      A  ++  SW E  +++FA    ++D+E+        G+   E    +  GSTAVVA++  + ++VANCG
Sbjct:   74 RHGAASVAGRRREMEDAVSLREAFAAPANGEVAAARCD---------FYGVFDGHGCSHVADACRERMHELVAEEMGAGSPAAAAREPASWTETMERSFA----RMDAEVIAGCRAESGSCRCEGQKCDHVGSTAVVAVVEESRVVVANCG 211          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12
Identity = 51/160 (31.87%), Postives = 74/160 (46.25%), Query Frame = 1
Query:  265 QLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGS---WQEQWKKAFANSFLKVDSEIGGA---------LGGEPVAPETAGSTAVVAIISPTLIIVANCG 708
            + +  P +G+ SV G+  +MED+V V P       ++    V  Q P    VHFF VYDGHGG QV+  C   MH  + EEL       ++G      + +W+     SF ++D                  +P     +GSTAV A+++   IIVAN G
Sbjct:  102 ETEDEPLYGIVSVMGRSRKMEDSVTVKP-------NLCKPEVNRQRP----VHFFAVYDGHGGSQVSTLCSTTMHTFVKEELEQNLEEEEEGSENDVVERKWRGVMKRSFKRMDEMATSTCVCGTSVPLCNCDPREAAISGSTAVTAVLTHDHIIVANTG 250          
BLAST of CX295062 vs. ExPASy Swiss-Prot
Match: P2C37_ORYSJ (Probable protein phosphatase 2C 37 OS=Oryza sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12
Identity = 54/161 (33.54%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  286 WGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARL---QDGGSWQEQWKKAFANSFLKVDSEIGGALGGE--------------PVAPETA---GSTAVVAIISPTLIIVANCG 708
            +G  S+ G+  +MEDAV++ P+F          T  D  P    +HFF V+DGHGG  V+  C E+MH+ +AEE+V   A L   Q     +E+ ++A A   +  +   GG  GG               P++ +T    GSTAVVA++    ++V+NCG
Sbjct:  114 FGSVSLAGRMRDMEDAVSLRPSFC---------TWLDGSP----MHFFAVFDGHGGPHVSALCREQMHVIVAEEMVAEAAALRQRQPAAMEEEEEERAVAGGAV-AELRPGGRAGGGGVRVRARHRAGVPCPLSGQTGAIIGSTAVVALLVRDRLVVSNCG 260          
The following BLAST results are available for this feature:
BLAST of CX295062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
P2C09_ORYSJ7.066e-2133.33Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
P2C51_ORYSJ1.740e-1940.54Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]
P2C78_ARATH1.473e-1837.28Probable protein phosphatase 2C 78 OS=Arabidopsis ... [more]
P2C30_ORYSJ3.629e-1730.95Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]
P2C49_ORYSJ2.352e-1635.48Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
P2C37_ARATH6.844e-1634.15Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
P2C68_ORYSJ9.883e-1535.76Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
P2C75_ARATH2.061e-1231.88Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]
P2C37_ORYSJ3.515e-1233.54Probable protein phosphatase 2C 37 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC05068B09SK DroRLeaf1 Citrus clementina cDNA clone C05068B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295062 ID=CX295062; Name=CX295062; organism=Citrus clementina; type=EST; length=708bp
GATTCGGCCGAGGCGGCGAACCTCTTATCAAACACTGCTCATAGTGACAA
GAAGTCAAAAATGGTCAATCCCGACAGTAAGGAAGAAGATTCCATGTCGT
TAGTTGATAGTTCAGGTCCTGATGAGTTTCTGACAGCAGTAAATAGGAGA
AGCGTTGCTGATGATGTTGAGTTGGAGATTTTTGCAGAGAGAGGAAAAAA
GGAGTCTGATGAGTCCAATCCAATGATACCTGAGCAGCATGAGGAGACGA
AGAGAGCTGTGATTCAATTAGATCAAGTGCCCCGTTGGGGAGTCAATTCT
GTTTGTGGTAAGAGACCAGAAATGGAAGATGCTGTAGCCGTTATTCCTGC
GTTTTTGCAAATTCAGACTCACGTGCTGATGGATACTGTCACCGATCAGT
TTCCAGATCAAGTACTTGTTCATTTCTTTGGTGTTTATGACGGACATGGT
GGCTGTCAGGTCGCAAATTATTGTTGTGAACGAATGCACTTGGCTTTGGC
AGAGGAGTTGGTGACTGCAAAAGCACGATTACAAGATGGTGGTAGTTGGC
AGGAGCAGTGGAAGAAAGCCTTTGCCAATAGCTTTCTGAAAGTTGATTCT
GAGATCGGAGGAGCTCTTGGAGGTGAACCTGTTGCCCCGGAAACTGCTGG
TTCAACTGCTGTTGTTGCCATTATATCTCCAACACTCATAATAGTAGCAA
ATTGTGGA
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