CX295064

Overview
NameCX295064
Unique NameCX295064
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: EXTN1_ARATH (Extensin-1 OS=Arabidopsis thaliana GN=EXT1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11
Identity = 49/129 (37.98%), Postives = 58/129 (44.96%), Query Frame = 1
Query:    1 PPNNYAGVPPPQNNYGGAPPPQNKYGGTPPPQNNYG-----GTPPPQSNYGGTPPLQSNYGGTPPPQNNYGGAPPPQNNYGGAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNS 372
            PP  Y   PPP  +Y  +PPP   Y   PPP  +Y       +PPP   Y   PP+   Y   PPP   Y   PPP  +Y  +PPP   Y   PPP  +   PP   Y   PPP  +Y    PPP Y S
Sbjct:   35 PPPVYKSPPPPVKHY--SPPP--VYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPPV---YKSPPPPV--YKSPPPPVKHY--SPPPV--YKSPPPPVKHYSPPPV--YKSPPPPVKHY---SPPPVYKS 145          

HSP 2 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 50/139 (35.97%), Postives = 60/139 (43.17%), Query Frame = 1
Query:    1 PPNNYAGVPPPQNNYGG-----APPPQNKYGGTPP-----PQNNYGGTPPPQSNYGGTPPLQSNYGGTPPPQNNYGGAPPPQNNYGGAPPPQNNYGGTPPPQNYGGTPPQNNYG-----GTPPPQNNYGGMQPPPNYNS 372
            PP  Y   PPP  +Y       +PPP  KY   PP     P   Y   PPP  +Y   PP+   Y   PPP  +Y  +PPP   Y   PPP  +Y  +PPP      PP  +Y       +PPP   Y    PPP Y S
Sbjct:   51 PPPVYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPPVYKSPPPPVYKSPPPPVKHY-SPPPV---YKSPPPPVKHY--SPPPV--YKSPPPPVKHY--SPPPVYKSPPPPVKHYSPPPVYKSPPPPVKY--YSPPPVYKS 177          
BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPFU (Metacaspase-1A OS=Aspergillus fumigatus GN=casA PE=3 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11
Identity = 44/95 (46.32%), Postives = 48/95 (50.53%), Query Frame = 1
Query:  124 QSNYGGTPPLQSNYGGTPPPQNNYG-GAPPPQNNYGGAPPPQNNYGGTPPPQNYGGTPPQNN---YGGTPPPQNNYGGMQPPPNYNSGNMGGMPP 396
            QS+YGG  P Q+ Y    PP N YG G P PQ  Y GAPPP N YG   PP  YG  PP      YGG  P  N Y        Y+ G+ GG PP
Sbjct:    8 QSSYGGGYPGQA-YREQHPPPNPYGYGQPSPQPGY-GAPPPHNGYG--QPPSGYGQPPPPTGNAVYGGRQPGMNQYQN-----TYSHGHQGGPPP 93          
BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPFC (Metacaspase-1A OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=casA PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11
Identity = 44/95 (46.32%), Postives = 48/95 (50.53%), Query Frame = 1
Query:  124 QSNYGGTPPLQSNYGGTPPPQNNYG-GAPPPQNNYGGAPPPQNNYGGTPPPQNYGGTPPQNN---YGGTPPPQNNYGGMQPPPNYNSGNMGGMPP 396
            QS+YGG  P Q+ Y    PP N YG G P PQ  Y GAPPP N YG   PP  YG  PP      YGG  P  N Y        Y+ G+ GG PP
Sbjct:    8 QSSYGGGYPGQA-YREQHPPPNPYGYGQPSPQPGY-GAPPPHNGYG--QPPSGYGQPPPPTGNAVYGGRQPGMNQYQN-----TYSHGHQGGPPP 93          
BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 55/175 (31.43%), Postives = 67/175 (38.29%), Query Frame = 1
Query:   16 AGVPPPQNNYGGA-------PPPQNKY--GGTPPPQNNYGGTPP---------PQSNYGGTPPLQSNYGGTPPPQNNYG------GAPPPQNNYG---GAPPPQ-----NNYGGTPPPQ-------NYGGTPPQ-----NNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPPNARW 408
            +G PP    YG         PPPQ  Y  GG  PP  +   + P         PQS+    P   S+  G PPP   Y         PP +  YG   GAPPP       +YG  P P         YG TPP       +YGG PP        +P  + + G  GG PP A +
Sbjct:    2 SGYPPTSQGYGYGYGGGNQPPPPQPPYSSGGNNPPYGSSTTSSPYAVPYGASKPQSSSSSAPTYGSSSYGAPPPSAPYAPSPGDYNKPPKEKPYGGGYGAPPPSGSSDYGSYGAGPRPSQPSGHGGGYGATPPHGVSDYGSYGGAPP--------RPASSGHGGGYGGYPPQASY 168          
BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: GRINA_HUMAN (Glutamate [NMDA] receptor-associated protein 1 OS=Homo sapiens GN=GRINA PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 51/147 (34.69%), Postives = 59/147 (40.14%), Query Frame = 1
Query:   25 PPPQNNYGGAP-PPQNKYGGTPPPQNNYGGTPPPQSNYGGTPPLQSNY--GGTPPPQNNYGGAPPPQNNYGGAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPPNARWSGNTPGNMNQNADGPS 456
            PPP   Y G P PP   Y   P     Y G P PQ  +  +P  Q  Y  G +P PQ  Y   P PQ  Y   P PQ  Y   P PQ   G  PQ  Y  +P P N YG  Q  P    G     P +  +    P +   N D P+
Sbjct:   15 PPPNPGYPGGPQPPMPPYAQPP-----YPGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYPQGPYPQEGYPQGPYPQ---GGYPQGPYPQSPFPPNPYGQPQVFP----GQDPDSPQHGNYQEEGPPSYYDNQDFPA 149          
BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: FMN2_HUMAN (Formin-2 OS=Homo sapiens GN=FMN2 PE=1 SV=4)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 51/142 (35.92%), Postives = 54/142 (38.03%), Query Frame = 1
Query:    1 PPNNYAGVPPPQNNYGGAPPPQNKYGGT----PPPQNNYGGTPPPQSNYGGTPPLQSNYGGTPPPQNNYGGAPPPQNNYGGAPPPQNNYG-GTPPPQNYGGT-----PPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPP 396
            PP   AG+PPP    G A PP     G     PPP    G  PPP     G PP        PPP    G  PPP     G PPP    G G PPP    G      PP    G  PPP     G+ PPP      +   PP
Sbjct:  935 PPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPP--------PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1068          

HSP 2 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 52/142 (36.62%), Postives = 55/142 (38.73%), Query Frame = 1
Query:    1 PPNNYAGVPPPQNNYG-GAPPPQNKYGG---TPPPQNNYGGTPPPQSNYGGTPPLQSNYGGTPPPQNNYGGAPPPQNNYGGAPPPQNNYG-GTPPPQNYGGT-----PPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPP 396
            PP   AG+PPP    G G PPP    G     PPP    G  PPP     G PP        PPP    G  PPP     G PPP    G G PPP    G      PP    G  PPP     G+ PPP      +   PP
Sbjct: 1045 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP--------PPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1178          

HSP 3 Score: 68.1662 bits (165), Expect = 5.054e-11
Identity = 53/145 (36.55%), Postives = 56/145 (38.62%), Query Frame = 1
Query:    1 PPNNYAGVPPPQNNYG-GAPPPQNKYGG---TPPPQNNYGGTPPPQSNYGGTPPLQSNYGGTPPPQNNYGGAPPPQNNYGGAPPPQNNYG-GTPPPQNYGGT-----PPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPPNAR 405
            PP   AG+PPP    G G PPP    G     PPP    G  PPP     G PP        PPP    G  PPP     G PPP    G G PPP    G      PP    G  PPP     G+ PPP      +   PP  R
Sbjct: 1012 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP--------PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPR 1148          

HSP 4 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 53/145 (36.55%), Postives = 56/145 (38.62%), Query Frame = 1
Query:    1 PPNNYAGVPPPQNNYG-GAPPPQNKYGG---TPPPQNNYGGTPPPQSNYGGTPPLQSNYG-GTPPPQNNYGGA---PPPQNNYGGAPPPQNNYGGTPPPQNYGGT-----PPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPP 396
            PP   AG+PPP    G G PPP    G     PPP    G  PPP     G PP     G G PPP    G     PPP    G  PPP     G PPP    G      PP    G  PPP     G+ PPP      +   PP
Sbjct: 1067 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPP 1211          
BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: BRM_DROME (ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 47/140 (33.57%), Postives = 54/140 (38.57%), Query Frame = 1
Query:    4 PNNYAGVPPPQNNYGGAPPPQNKYGGTPPPQNNYGGTPPPQSNYGGTPPLQSNYGGTPPPQNNYGGAPPPQNNYGGAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNSGNMGGMPPNARWSGNTP 423
            P    G PPP + + G PP   +    PPP     GTPP  S    TPP  + YG   P Q      PPP    G   PPQ    G PPP      P Q      PPP        P P+ +    GG P +   SG  P
Sbjct:  221 PPGAPGGPPPGSQHAGQPPVPPQQQQQPPPS---AGTPPQCS----TPPASNPYGPPVPGQKMQVAPPPPHMQQGQPLPPQPPQVGGPPPIQQQQPPQQQQQQSQPPP--------PEPHQHQLPNGGKPLSMGPSGGQP 345          
BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: EXTN2_ARATH (Extensin-2 OS=Arabidopsis thaliana GN=EXT2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11
Identity = 46/139 (33.09%), Postives = 59/139 (42.45%), Query Frame = 1
Query:    1 PPNNYAGVPPPQNN-----YGGAPPPQNKYGGTPPPQNN-----YGGTPPPQSNYGGTPPLQSN-----YGGTPPPQNNYGGAPPPQNNYGGAPPPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNS 372
            PP  Y+  PPP  +     Y  +PPP   Y   PPP  +     Y  +PPP   Y   PP   +     Y  +PPP   Y   PPP  +    P P+ +Y   PPP  Y   PP      +P P+ +Y    PP  YNS
Sbjct:  448 PPYVYSSPPPPYYSPSPKVYYKSPPPPYVYSSPPPPYYSPSPKVYYKSPPPPYVYSSPPPPYYSPSPKVYYKSPPPPYVYSSPPPPYYS----PSPKVHYKSPPPPYVYSSPPPPYY---SPSPKVHYKSPPPPYVYNS 579          
BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: WASL_RAT (Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus GN=Wasl PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 52/154 (33.77%), Postives = 63/154 (40.91%), Query Frame = 1
Query:   25 PPPQNNYGGAPPPQNKYGGTPPPQNNYGGTPPPQSNYGGTPPLQSN--YGGTPPPQNNYGGA----PPPQNNYGGAPP--PQNNYGGTPPPQNYGGTPPQNNYGGT----PPPQNNYGGMQPPPNYNSGNMGGMPPNARWSGNTPGNMNQNADG 450
            PPP  + GG PPP       PPP ++ G  PPP    G  PP  S       PPP  +  G     PPP   Y   PP  P +   G PPP      PP +  G T    PPP     G  PPP   S     +P +   SGN    ++Q  +G
Sbjct:  275 PPPPPSRGGPPPP-------PPPPHSSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPPPP------PPLSMAGSTAPPPPPPPPPPPGPPPPPGLPSDGDHQVPAS---SGNKAALLDQIREG 412          
BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: SEC31_ASPFU (Protein transport protein sec31 OS=Aspergillus fumigatus GN=sec31 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 48/135 (35.56%), Postives = 56/135 (41.48%), Query Frame = 1
Query:    1 PPNNYA-GVPPPQNNYGGAPPPQNKYGGTPPP-----QNNYGGTP--PPQSNYGGTPPLQSNYGGTPPPQNNYGGAPPPQNNYGGAP------PPQNNYGGTPPPQNYGGTPPQNNYGGTPPPQNNYGGMQPPPN 363
            PP   A  VPPP    G APPP+     T PP      N Y   P  PP  +  G PP  S   G P P N     PPP N Y  +P      P  +     PPP +   +P  +  G  PPP N Y    PPP+
Sbjct:  985 PPTQRAPSVPPPPK--GTAPPPRVTSPPTNPPGPSSAANPYASLPQSPPMGSTMGVPPPPSIPRG-PSPYNAPPSMPPPSNRYAPSPATQAASPQLSTRAPVPPPPHAAASPYTSQPGSHPPPANPYAPSTPPPS 1116          
The following BLAST results are available for this feature:
BLAST of CX295064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
EXTN1_ARATH1.018e-1137.98Extensin-1 OS=Arabidopsis thaliana GN=EXT1 PE=2 SV... [more]
MCA1A_ASPFU1.737e-1146.32Metacaspase-1A OS=Aspergillus fumigatus GN=casA PE... [more]
MCA1A_ASPFC1.737e-1146.32Metacaspase-1A OS=Aspergillus fumigatus (strain CE... [more]
CML50_ARATH2.963e-1131.43Probable calcium-binding protein CML50 OS=Arabidop... [more]
GRINA_HUMAN3.870e-1134.69Glutamate [NMDA] receptor-associated protein 1 OS=... [more]
FMN2_HUMAN3.870e-1135.92Formin-2 OS=Homo sapiens GN=FMN2 PE=1 SV=4[more]
BRM_DROME3.870e-1133.57ATP-dependent helicase brm OS=Drosophila melanogas... [more]
EXTN2_ARATH5.054e-1133.09Extensin-2 OS=Arabidopsis thaliana GN=EXT2 PE=2 SV... [more]
WASL_RAT6.601e-1133.77Neural Wiskott-Aldrich syndrome protein OS=Rattus ... [more]
SEC31_ASPFU8.621e-1135.56Protein transport protein sec31 OS=Aspergillus fum... [more]

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Properties
Property NameValue
Genbank descriptionC05068B11SK DroRLeaf1 Citrus clementina cDNA clone C05068B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295064 ID=CX295064; Name=CX295064; organism=Citrus clementina; type=EST; length=713bp
CCACCCAACAACTATGCAGGAGTGCCGCCACCACAGAACAACTATGGAGG
AGCGCCGCCACCACAGAACAAGTATGGAGGGACGCCGCCACCACAGAACA
ACTATGGAGGGACGCCGCCACCACAGAGCAACTATGGAGGAACGCCGCCA
CTGCAGAGCAACTATGGAGGAACGCCGCCACCGCAGAACAACTATGGAGG
AGCGCCGCCACCGCAGAACAACTATGGAGGAGCGCCGCCACCGCAGAACA
ACTATGGAGGAACGCCGCCACCACAGAACTATGGAGGAACACCACCACAG
AACAACTATGGAGGAACTCCACCGCCACAAAATAATTATGGAGGAATGCA
GCCACCTCCTAATTACAACTCAGGGAACATGGGAGGAATGCCGCCGAATG
CCAGATGGTCAGGCAACACGCCTGGGAATATGAACCAGAATGCAGATGGT
CCTTCCTTTCAGAATAGCTACACACCAAGACAGTGAAATTGAGGCATGCC
TGGTGGAAACCTTTACCAGGCTTGAAACATGCCCAGACATATTGTGTTGT
ACTCCTTCCCCTGAGTAGACTACTTTTGGCATGTTGTAGATAAGTATGGA
TGATAGCCTGGATCTTCGGTTAATGTTGTCAATGTTCAGTGTTTTCTAGA
CTTCAGGAATTTTATTGATGCTATCTTCTGGCACAGAGATGTTGAGATCT
GTTTTACGGTTTG
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