CX295064

Overview
NameCX295064
Unique NameCX295064
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295064 vs. ExPASy Swiss-Prot
Match: MYOK_DICDI (Myosin-K heavy chain OS=Dictyostelium discoideum GN=myoK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 51/152 (33.55%), Postives = 61/152 (40.13%), Query Frame = 1 
Query:   22 VPPPQNNYGGAPPPQNKYGGTPPPQNNYGGTPPPQSNYGGTPPLQSNYGGTPPPQNNYGGAPPPQNNYGGAPPPQNNYGGTPPP--QNYGGTPPQNNYGGTPPPQNNYGGMQPPPNYNS-GNMGGMPPNARWSGNTPGNMNQNADGPSFQNS 468
            V P  ++ GG        GG P         P P    G   P     GG P      GG PP +   GG PPP    GG PPP  QN G  PP +N GG PPP    G + PPP   +    GG P N    G  P  ++ +  G  +  S
Sbjct:  120 VSPNNSSGGGIGGSGGGNGGIPQYDGGSDDRPSPPMGRGMGMPGMVGRGGLP----TRGGGPPSR---GGGPPPTRGRGGPPPPIPQNRGAPPPVSN-GGAPPPVAR-GPVAPPPTRGAPPTRGGGPANRGGRGGGPPPVSTSRGGGGYGGS 262
The following BLAST results are available for this feature:
BLAST of CX295064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
MYOK_DICDI8.621e-1133.55Myosin-K heavy chain OS=Dictyostelium discoideum G... [more]

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Properties
Property NameValue
Genbank descriptionC05068B11SK DroRLeaf1 Citrus clementina cDNA clone C05068B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295064 ID=CX295064; Name=CX295064; organism=Citrus clementina; type=EST; length=713bp
CCACCCAACAACTATGCAGGAGTGCCGCCACCACAGAACAACTATGGAGG
AGCGCCGCCACCACAGAACAAGTATGGAGGGACGCCGCCACCACAGAACA
ACTATGGAGGGACGCCGCCACCACAGAGCAACTATGGAGGAACGCCGCCA
CTGCAGAGCAACTATGGAGGAACGCCGCCACCGCAGAACAACTATGGAGG
AGCGCCGCCACCGCAGAACAACTATGGAGGAGCGCCGCCACCGCAGAACA
ACTATGGAGGAACGCCGCCACCACAGAACTATGGAGGAACACCACCACAG
AACAACTATGGAGGAACTCCACCGCCACAAAATAATTATGGAGGAATGCA
GCCACCTCCTAATTACAACTCAGGGAACATGGGAGGAATGCCGCCGAATG
CCAGATGGTCAGGCAACACGCCTGGGAATATGAACCAGAATGCAGATGGT
CCTTCCTTTCAGAATAGCTACACACCAAGACAGTGAAATTGAGGCATGCC
TGGTGGAAACCTTTACCAGGCTTGAAACATGCCCAGACATATTGTGTTGT
ACTCCTTCCCCTGAGTAGACTACTTTTGGCATGTTGTAGATAAGTATGGA
TGATAGCCTGGATCTTCGGTTAATGTTGTCAATGTTCAGTGTTTTCTAGA
CTTCAGGAATTTTATTGATGCTATCTTCTGGCACAGAGATGTTGAGATCT
GTTTTACGGTTTG
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