CX295065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37 Identity = 75/143 (52.45%), Postives = 107/143 (74.83%), Query Frame = 1 Query: 190 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 RGK ++KRIEN T+RQVTF KRR+GLLKKA+ELSVLCDAEVAL++FS RG+LYE+S+ S+ +TIERY+K D S + E ++QH ++E + + ++ L+ + R L+GD + EL+QLE +L++ L +IRARKN+L Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNEL 187
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.336e-36 Identity = 74/146 (50.68%), Postives = 106/146 (72.60%), Query Frame = 1 Query: 181 KMVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 K+ RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+++ S+ TIERY+K D I E ++Q+ ++E S + ++ L+ R LG+ L + +L+ LE ++E+ +S+IRA+KN+L Sbjct: 16 KLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNEL 161
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.664e-36 Identity = 74/146 (50.68%), Postives = 108/146 (73.97%), Query Frame = 1 Query: 181 KMVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 K+ RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+++ S+ TIERY+K D S + E ++Q ++E S + ++ ++ R ++G+ L T+ +L+ LE +LE+ +SRIR++KN+L Sbjct: 16 KLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNEL 161
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.397e-36 Identity = 73/146 (50.00%), Postives = 108/146 (73.97%), Query Frame = 1 Query: 181 KMVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 K+ RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+++ S+ TIERY+K D I E ++Q+ ++E S + ++ L+ R +LG+ L ++ +L+ LE ++E+ +S+IR++KN+L Sbjct: 16 KLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNEL 161
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 9.661e-36 Identity = 74/146 (50.68%), Postives = 110/146 (75.34%), Query Frame = 1 Query: 181 KMVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 K RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+S+ S+ TIERY+K D + E ++Q+ ++E++ + ++ ++ + R+L+G+ + + EL+ LE +LERS++RIR++KN+L Sbjct: 16 KSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNEL 161
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.152e-35 Identity = 72/146 (49.32%), Postives = 107/146 (73.29%), Query Frame = 1 Query: 181 KMVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 K+ RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVAL+IFS RG+LYE+++ S+ TIERY+K D + E ++Q+ ++E S + ++ ++ + R ++G+ L EL+ LE +LE+ +SR+R++KN+L Sbjct: 15 KLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNEL 160
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.811e-35 Identity = 73/146 (50.00%), Postives = 110/146 (75.34%), Query Frame = 1 Query: 181 KMVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 K RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+S+ S+ TIERY+K D + E ++Q+ ++E++ + ++ ++ + R+L+G+ + + EL+ LE +L+RS++RIR++KN+L Sbjct: 16 KAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNEL 161
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.671e-35 Identity = 82/151 (54.30%), Postives = 110/151 (72.85%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS-INKTIERYQKKTKDIGINSK-IVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++KRIEN SRQVTF+KRRNGLLKKA+ELS+LCDAEVALIIFS RG+L+EFSS S + KT+ERY + NS+ ++ +E + T++EFL+ +R +LG+ L P ++ EL+QLENQ+E SL +IR+RKNQ +Q Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY----RSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQ 147
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.671e-35 Identity = 82/151 (54.30%), Postives = 110/151 (72.85%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS-INKTIERYQKKTKDIGINSK-IVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++KRIEN SRQVTF+KRRNGLLKKA+ELS+LCDAEVALIIFS RG+L+EFSS S + KT+ERY + NS+ ++ +E + T++EFL+ +R +LG+ L P ++ EL+QLENQ+E SL +IR+RKNQ +Q Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY----RSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQ 147
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.262e-35 Identity = 71/146 (48.63%), Postives = 106/146 (72.60%), Query Frame = 1 Query: 181 KMVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 K+ RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVAL++FS RG+LYE+++ S+ TIERY+K D + E ++Q+ ++E S + ++ L R ++G+ L + EL+ LE ++E+ +S+IR++KN+L Sbjct: 16 KLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNEL 161 The following BLAST results are available for this feature:
BLAST of CX295065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295065 ID=CX295065; Name=CX295065; organism=Citrus clementina; type=EST; length=692bpback to top |