CX295065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34 Identity = 72/146 (49.32%), Postives = 107/146 (73.29%), Query Frame = 1 Query: 181 KMVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 K+ RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVAL+IFS RG+LYE+++ S+ TIERY+K D I E ++Q+ ++E S + ++ ++ R +LG+ L EL+ LE++LE+ +SR+R++K+++ Sbjct: 15 KIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEM 160
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34 Identity = 75/147 (51.02%), Postives = 111/147 (75.51%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSC-SINKTIERYQKKTKDIGINSKIVEDHS-QHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 M RGK ++KRIEN TSRQVTF KRRNGLLKKA+EL++LCDAE+ALI+FS RG+LYEFS+ S TIERY+K + ++ +++ +S Q+ ++E + M +++ L+ A R L+G+ + T EL+ LEN+LE+ +SRIR++K++L Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHEL 147
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.822e-34 Identity = 80/151 (52.98%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS-INKTIERYQKKTKDI-GINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++KRIEN SRQVTF+KRRNGLLKKA+ELSVLCDAEVALIIFS RG+L+EFS+ S + KT+ERY+ ++ + + +E + T++EFL+ +R LLG+ L P ++ EL+QLENQ+E SL IR+ KNQ +Q Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQ 151
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.822e-34 Identity = 80/151 (52.98%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS-INKTIERYQKKTKDI-GINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++KRIEN SRQVTF+KRRNGLLKKA+ELSVLCDAEVALIIFS RG+L+EFS+ S + KT+ERY+ ++ + + +E + T++EFL+ +R LLG+ L P ++ EL+QLENQ+E SL IR+ KNQ +Q Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQ 151
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.301e-34 Identity = 80/149 (53.69%), Postives = 101/149 (67.79%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RG+ +MKRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF S I TIERY + + +++ E+ +Q +E + + +K E L R LLG+ L + ELQ LE QLE +L+ R RK Q+ E+ Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERY-NRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEE 148
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.042e-34 Identity = 80/149 (53.69%), Postives = 108/149 (72.48%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS-CSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFRE 627 M RG Q++RIEN +RQVTFSKRRNGLLKKA E+SVLCDA+VALI+FS +GKLYEFSS S+ +ERYQ+ + D + + ++ +E + +KL+ L+ ++R+LLG+ L+ TI ELQQLE+QLE SL IR++KNQL E Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFE 149
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 9.042e-34 Identity = 80/149 (53.69%), Postives = 108/149 (72.48%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS-CSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFRE 627 M RG Q++RIEN +RQVTFSKRRNGLLKKA E+SVLCDA+VALI+FS +GKLYEFSS S+ +ERYQ+ + D + + ++ +E + +KL+ L+ ++R+LLG+ L+ TI ELQQLE+QLE SL IR++KNQL E Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFE 149
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.181e-33 Identity = 83/168 (49.40%), Postives = 110/168 (65.48%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQXXXXXXXXXXXXXRNTKLR 687 M RGK ++KRIEN +RQVTFSKR++GLLKKA+ELSVLCDAEV+LIIFS GKLYEFS+ + +TIERY + KD +++ +ED +Q ++E + + K E L R L+G+ LE +I ELQ LE QLE +LS R +K Q+ EQ N KL+ Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYY-RCKDNLLDNDTLED-TQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLK 166
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.861e-33 Identity = 75/150 (50.00%), Postives = 106/150 (70.67%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS-INKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++RIEN SRQVTF+KRRNGLLKKA+ELS+LCDAEVAL++FS G+LY+FSS S + KT+ERYQ+ + D Q+ +E N+ +E L+ ++R LLG+ L P +EL+QLE+Q+ R+L +IR+RK Q+ ++ Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDE 150
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.861e-33 Identity = 76/153 (49.67%), Postives = 111/153 (72.55%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFS-SCSINKTIERYQKKTKDIGINS---KIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RG+ ++KRIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+S + ++ TI+RY KK G S I + Q+ ++E++ + +++ L+ + L+GD + ++ EL+QLE++LE+ +S+IRARKN+L + Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRY-KKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASE 152 The following BLAST results are available for this feature:
BLAST of CX295065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295065 ID=CX295065; Name=CX295065; organism=Citrus clementina; type=EST; length=692bpback to top |