CX295065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.997e-33 Identity = 80/151 (52.98%), Postives = 103/151 (68.21%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSC--SINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++KRIEN T+RQVTFSKRR GLLKKA ELSVLCDAE+ LIIFS GKL+E+SS S+ K IERYQK + ++I E +QH E + M + E L+ R+++G+ L T+ EL L QLE + SR+R+RKNQL +Q Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVS-----GARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQ 146
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.227e-32 Identity = 77/152 (50.66%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS--CSINKTIERYQKKTKDIGINSKIVE-DHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++KRIEN+T+RQVTFSKRR GLLKKA EL+VLCDA V ++IFS GK++E+ S CS+ + IE+YQ T NS E +H Q E + M ++E LE R+ GD L T+D++ LE QLE S+S++RARK+QL +Q Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHAT-----NSHFEEINHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQ 147
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.909e-32 Identity = 76/150 (50.67%), Postives = 107/150 (71.33%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS-INKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RG+ ++KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S S +NKT+ERYQ+ + + + ++ + +E + K++ L+ + R LLG+ L + EL+QLE+QL++SL +IR+ K Q +Q Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYG-SLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQ 149
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.909e-32 Identity = 80/153 (52.29%), Postives = 108/153 (70.59%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF-SSCSINKTIERYQK---KTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RG+ ++KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF SS S+ KT+ERYQK + I+++ + S +++E + + E L+ ++R LLG+ L P EL+ LE QL+ SL +IR+ + QL +Q Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEIS--SQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQ 151
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.480e-32 Identity = 79/151 (52.32%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF-SSCSINKTIERYQK-KTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RG+ ++KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF SS ++ KT++RYQK I +N+K ++ +++ E + + E L+ +R LLG+ L P EL+QLE QL+ SL ++R+ K Q +Q Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKE-LENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQ 150
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.480e-32 Identity = 76/149 (51.01%), Postives = 103/149 (69.13%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS-INKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFRE 627 M RGK Q+KRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVALIIFS +GKLYE+++ S ++K +ERY++ + + D + E + K+E ++ ++ L+G+ LE + ELQQLE QLE SL IR+RK+QL E Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLE 149
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.444e-31 Identity = 80/153 (52.29%), Postives = 105/153 (68.63%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF-SSCSINKTIERYQKKT---KDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RG+ ++KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF S S+ +T+ERYQK + D I +K + Q ++ E + ++E L+ +R LLG+ L I EL+QLE QL+ SL IR+ + Q +Q Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNK-ENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQ 152
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.444e-31 Identity = 75/149 (50.34%), Postives = 103/149 (69.13%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS-INKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFRE 627 M RGK Q+KRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVALIIFS +GKLY++++ S ++K +ERY++ + + D + E + K+E ++ ++ L+G+ LE + ELQQLE QLE SL IR+RK+QL E Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLE 149
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.885e-31 Identity = 78/151 (51.66%), Postives = 105/151 (69.54%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS-INKTIERYQK-KTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RG+ ++KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEV+LI+FS RGKLYEF S S + KT+ERYQK I +N+K ++ +++ E + + E L+ +R LLG+ L P EL+QLE QL+ SL ++R K Q +Q Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKE-LENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQ 150
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31 Identity = 78/153 (50.98%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS-INKTIERYQKKTKDIGINSKIVEDHSQHAKE----ETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFRE 627 M RG+ ++KRIEN +RQVTFSKRR GLLKKA E+SVLCDAEV+LI+FS +GKL+E+SS S + K +ERY++ + I D +A+ E S + K+E LE +R LG+ LEP ++ +LQ LE QLE +L IR+RKNQL E Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYS--YAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNE 151 The following BLAST results are available for this feature:
BLAST of CX295065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295065 ID=CX295065; Name=CX295065; organism=Citrus clementina; type=EST; length=692bpback to top |