CX295065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.677e-28 Identity = 70/152 (46.05%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAK---EETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++RI+N+TSRQVTFSKRRNG+ KKA EL++LCDAEV L+IFS G+LYE+SS S+ I+RY K+KD + V + + K E +++ +L L+ R+L+G+ L + ELQ LENQLE SL +R +K+ + ++ Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRY-GKSKD---EQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDE 148
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.677e-28 Identity = 70/171 (40.94%), Postives = 108/171 (63.16%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHA--KEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQXXXXXXXXXXXXXRNTKLRE 690 M RGK +KRI+N +RQVTFSKRR GL+KKA EL++LCDA+V LI+FS G+LY+FSS S+ IERYQ+ ++ + +++ S+ + E + + +++ L R+LLG+ + T+ +LQ L+NQ+E SL IR +K+QL E+ N++LR+ Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEE---HCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRK 168
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.677e-28 Identity = 73/151 (48.34%), Postives = 100/151 (66.23%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS--CSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++KRIEN TSRQVTFSKRR GLLKK ELSVLCDA++ LIIFS +GKL+E+ S S+++ I RY + T S VED+ +E + M L+++ ++ GD L +EL +LE QLE +L++IRARK +L ++Q Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTG----ASLPVEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQ 150
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.683e-28 Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIG-INSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQXXXXXXXXXXXXXRNTKLR 687 M R + ++KRIE+A +RQVTFSKRR GL KKA ELSVLCDA+VALI+FS GKL F+S S+N+ I++Y + ++G ++ + +H+K +++ +L + R++ G+ LE +IDELQQLE LE L R+ K+Q F EQ N +LR Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSK--YAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLR 167
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.265e-27 Identity = 76/152 (50.00%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIER---YQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++KRIENA SRQVTFSKRR GLLKKA ELSVLCDAEVA+I+FS GKL+EFSS S+ KT+ R YQ + GIN K +Q E + ++ L+ + G L ++ ELQ LE QL SL +R RK L +Q Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLLRYGNYQISSDVPGINCK---TENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQ 149
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.817e-27 Identity = 68/151 (45.03%), Postives = 100/151 (66.23%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQ--HAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++RI+++TSRQVTFSKRR GL+KKA EL++LCDAEV LIIFS GKLY+F+S S+ I+RY K + +++ S+ + E + + +L L+ R+++G+ L +++EL LENQ+E SL IR RK QL ++ Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIE---QQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQE 148
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.313e-26 Identity = 62/154 (40.26%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS--CSINKTIERYQKKTKDIGINSKIVEDHSQ---HAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK Q++RIEN SRQVTFSKRR GLLKKA E++VLCD +VA I+FS +G L+ ++S ++ + +E+Y + + + + ++E+ + + + ++E L+ ++R L+G L+ T+ ++QQLENQ++ SL+ IR+RK +L E+ Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRH-ELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEK 153
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.063e-26 Identity = 66/152 (43.42%), Postives = 100/152 (65.79%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS--CSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEP-CTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M +GK +MKRIE+AT RQVTFSKRR G LKKA EL+VLCDA+V +++FS +GKL++F S + + RY+ T++ + +D + E + + +++ LE + R+ G+ L T+DEL QL+ QLE SLS++ ARK++L +Q Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNTRLQETNRDD--EQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQ 150
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.063e-26 Identity = 72/176 (40.91%), Postives = 102/176 (57.95%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDI------GINSKIVEDHS-QHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQXXXXXXXXXXXXXRNTKLRE 690 M R K Q+K+I+N+T+RQVTFSKRR GL KKA ELSVLCDA+VALIIFS GKL+++SS S+ + +ER +K++ + ++VE+ + +E S +L R++ G+ L+ I+ELQQLE LE LSR+ RK + N KLR+ Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRL-------RQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQ 169
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.184e-25 Identity = 71/175 (40.57%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDI------GINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQXXXXXXXXXXXXXRNTKLRE 690 M R K Q+++I+NAT+RQVTFSKRR GL KKA ELSVLCDA+VALIIFS GKL+EF S S+ + +ER+ ++K++ + ++VE +S HA+ M ++ R++ G+ L+ I+ELQQLE LE L+R+ K+ + N +LR+ Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHNLQSKNLEKLDQPSLELQLVE-NSDHAR-----MSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQ 169 The following BLAST results are available for this feature:
BLAST of CX295065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295065 ID=CX295065; Name=CX295065; organism=Citrus clementina; type=EST; length=692bpback to top |