CX295065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.655e-22 Identity = 62/149 (41.61%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++K+IEN T+RQVTFSKRR GL+KK ELS+LCDA + LI+FS GKL EF S N+ + + G+ D + E + + LE+ R G L +EL LE QLE S+ ++R RKN+L ++Q Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCS-EQNRMPQLIDRYLHTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQ 148
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.655e-22 Identity = 65/156 (41.67%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS--INKTIERYQKKTKDIGINSKIVEDHS-----QHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK ++KRIENAT+RQVT+SKRR G++KKA EL+VLCDA+VA+I+FS GK +EF S S I +RYQ+ IG + I + + H K+ N+ T++ R+ +G+ L+ DEL+ LE ++ +L +R RK + Q Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA---IGTSLWIEQYENMQRTLSHLKDINRNLRTEI-------RQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQ 146
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.940e-22 Identity = 59/147 (40.14%), Postives = 91/147 (61.90%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS---CSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQ 615 M RG++++KRIEN T RQ TF KRR+GL KKA EL+VLCDA++ L++FS GKLY F S S+ + +ERY+ T ++K+ D Q + E + + + LE R + D E T+ L+ LE+ LE ++ ++R+ K++ Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATT-----HTKVWADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDR 142
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 56/167 (33.53%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 190 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQXXXXXXXXXXXXXRNTKLRE 690 R + ++RI+N +RQVTFSKRR GL KKA ELS+LCDAEV L++FS GKL++F+S S+ + I+RY +K + D + + +L + R++ G+ L +++LQ+LE LE L + K++ ++ N +L+E Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKE 188
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21 Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSC-SINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGD-GLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK Q++RIEN RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ ++ + IERY+ + G + D K+E + ++ L+ R + G+ E T++EL LE LE + IR+ K Q+ ++ Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSAS---GEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQE 148
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21 Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSC-SINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGD-GLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK Q++RIEN RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ ++ + IERY+ + G + D K+E + ++ L+ R + G+ E T++EL LE LE + IR+ K Q+ ++ Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSAS---GEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQE 148
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.310e-21 Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS-CSINKTIERYQKKT-KDIGINSKIVEDHSQ------HAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RGK Q+KRIEN RQVTF KRR GLLKKA ELSVLCDAE+ ++IFSP+GKL+E ++ ++ I++Y K T G +S Q K+E + + ++E L+ + G G ++EL LE LE +S+IR+ K + ++ Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQE 157
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.778e-21 Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS--CSINKTIERYQKKTKDI--GINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRI 597 M RGK ++KRIEN+T+RQVTFSKRR+G+LKKA E+SVLCDAEV ++IFS GKLY++ S S+++ +E+YQ + I K + K+E NM +L R L G+ L EL +E L+ + + Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIEL-------RHLKGEDLNSLQPKELIMIEEALDNGIVNV 135
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.778e-21 Identity = 61/148 (41.22%), Postives = 88/148 (59.46%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAK------RKLLGDGLEPCTIDELQQLENQLERSLSRIRARK 609 M RGK Q+KRIEN T+RQVT+SKRRNGL KKA EL+VLCDA V++I+FS KL+E+ S + TK+I + + D A + TK + LE + ++ LG+ L+ I EL++LE+++E + +R RK Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTT---------TKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERK 139
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.956e-20 Identity = 54/149 (36.24%), Postives = 91/149 (61.07%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCS--INKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFR 624 M RGK ++KRIEN+++RQVT+SKRRNG++KKA E+SVLCDA V++IIF+ GK++EF S S + ++ Y K + ++ + +H E + + + + +++ R L G+ + EL LE+ LE S ++ ++ + R Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLS-----GKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEFVR 144 The following BLAST results are available for this feature:
BLAST of CX295065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295065 ID=CX295065; Name=CX295065; organism=Citrus clementina; type=EST; length=692bpback to top |