CX295067
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.173e-22 Identity = 71/202 (35.15%), Postives = 94/202 (46.53%), Query Frame = 3 Query: 3 DAFITALNSYPEFGR----TDTNREVAAFFAHVTHETTD---------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGF--DGLNSPETVARDRVISFKTALWFWMTY-------------------VHSALNQ--GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500 DAFI A NS+P FG T +E+AAFF +HET +C++++ ++D YYGRGPIQLT NY AG+ IG + +N+P+ VA D +ISFKTA+WFWMT +A N+ G+G ING ECG R+ Y YC V G L+C Sbjct: 57 DAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDR--------------YYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDC 244
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.173e-22 Identity = 71/208 (34.13%), Postives = 91/208 (43.75%), Query Frame = 3 Query: 3 DAFITALNSYPEFGRT---DTN-REVAAFFAHVTHETTD-------------FCYIEEKNKADPHC---TSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWM----------------------TYVHSALNQGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500 DA+ A YP FG T DT RE+AAFFA + ET+ +C + E N +C T YPC YYGRGP+QL N NY + G +G + L+ PE VA D V+SF+ ALWFWM + + GFG I EC + + +R+ Y YC VDPG L C Sbjct: 93 DAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVAD--YYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYC 298
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.772e-21 Identity = 67/176 (38.07%), Postives = 81/176 (46.02%), Query Frame = 3 Query: 3 DAFITALNSYPEF---GRTDTN-REVAAFFAHVTHETTDFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTD 455 DAFI A S+P F G TD REVAAF A +HETT P Y + Y+GRGPIQ++ N NY AG+AIG D L +P+ V D + FKTALWFWMT H + G+G I+G ECG V DR+ Y D Sbjct: 23 DAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTG---------GWPTAPDGPYELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYKD 189
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: IAMY_COILA (Alpha-amylase inhibitor/endochitinase (Fragments) OS=Coix lachryma-jobi PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.872e-20 Identity = 61/139 (43.88%), Postives = 74/139 (53.24%), Query Frame = 3 Query: 78 FAHVTHETTDFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMTYVHSALNQGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRL 494 FAHVTHET + Y DP T Q PCA GK YYGRGPIQ++ N NY AGRAIG DGL +P+ VA+D + +KTAL F +NG G + + V Y YC++ GVDPGP L Sbjct: 24 FAHVTHETGNNAY------CDPSKT--QKPCAAGKKYYGRGPIQISXNYNYGPAGRAIGMDGLGNPDRVAQDALDDYKTALXF------------------LVNGEEAVPGLS---AANAVSYYRQYCQQLGVDPGPNL 133
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 1.872e-20 Identity = 57/131 (43.51%), Postives = 73/131 (55.73%), Query Frame = 3 Query: 6 AFITALNSYPEFGR----TDTNREVAAFFAHVTHETTDFCYIEEKNKADPH-----------------CTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT 335 +F+ A S+P FG REVAAF AH++ T+ E + +PH CTS +PCA GK Y RGPIQLT N NY AG+AIG D + +P+ V +D +ISFKTALWFWM+ Sbjct: 159 SFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSG----ERSDVENPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMS 285
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.423e-13 Identity = 59/192 (30.73%), Postives = 79/192 (41.15%), Query Frame = 3 Query: 3 DAFITALNSYPEFGRTDTN----REVAAFFAHVTHETTDFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALNQ---------------GFGETIRKINGPAECG-GRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500 +AFI+A +P+FG T + RE+AAF +HET + +P A G Y G + N NY G + L PE V D I+FKTALWFWMT H+ + + G+G ING ECG G + +R+ Y YC G G L+C Sbjct: 115 NAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGW-----------------WPAAQGD-QYDWGYCHM--NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDC 286 The following BLAST results are available for this feature:
BLAST of CX295067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295067 ID=CX295067; Name=CX295067; organism=Citrus clementina; type=EST; length=678bpback to top |