CX295071

Overview
NameCX295071
Unique NameCX295071
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: BDF2_YEAST (Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae GN=BDF2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.539e-11
Identity = 39/123 (31.71%), Postives = 64/123 (52.03%), Query Frame = 1
Query:   94 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 450
            D +   +   + +Q+  R    I + +   K +   +PF+ PVD   L L +Y++V++ PMD  TI N  M+ K    Y+ + +   D+ LVF N  ++N E ++VH M K L E F   WL+
Sbjct:  307 DIYENSKPKSKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWLE 425          
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: CBP_MOUSE (CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11
Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  133 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 441
            Q L     A++RQ  +   + PF  PVD + LG+ DY+++++ PMD STIK K+D    TG Y+   +   DVRL+F NA  YN +   V+     L E FE++
Sbjct: 1093 QALMPTLEALYRQDPE---SLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLD----TGQYQEPWQYVDDVRLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1189          
The following BLAST results are available for this feature:
BLAST of CX295071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
BDF2_YEAST3.539e-1131.71Bromodomain-containing factor 2 OS=Saccharomyces c... [more]
CBP_MOUSE4.622e-1138.46CREB-binding protein OS=Mus musculus GN=Crebbp PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05068C06SK DroRLeaf1 Citrus clementina cDNA clone C05068C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295071 ID=CX295071; Name=CX295071; organism=Citrus clementina; type=EST; length=676bp
GATAATAATCAACCAAACACTTCGAAAAGTATCTCAATTGCGAAGGAAAA
ATTGAAGGATAGACATGTTGCTAGCATTGAGAAGCAGCAGCAAGATGCAT
TTCATAGGGAAGAAGCTGCTGGAAGGAGGATGCAAGAACTTAAGCGCCAG
TTTGCTGCAATTTTTCGTCAGATCACTCAGCACAAGTGGGCATGGCCTTT
TATGCATCCTGTTGATGTTGAAGGTCTTGGTTTGCATGACTACTATGAGG
TTATTGAGAAGCCCATGGACTTTAGTACAATAAAGAATAAGATGGATGGT
AAGGATGGTACTGGGTACAGGAATGTGAGGGAGATATATGCTGATGTTAG
ATTGGTATTTAAGAATGCAATGAAATACAATGACGAAAGAGATGATGTCC
ATGTAATGGCAAAATCACTGTTGGAAAAATTTGAAGAAAAGTGGCTGCAG
CTTTTGCCTAAAGTAATGGAAGAGCTTGTGATGGCTTCCATACTTGTACT
TTCAGGAGAAAAGACAAGAGGAGGAGGAAGCGAAGGCACAACTTGATATG
CAACTCACTCAGGAGGCTGTCCAGACGAACAAAGCTAAGGAATTAAGAAG
TGAACTTAATGAAGTTGATATGCAACTCGAGAACCTCAGAGAAACAGTGA
TTCAGAAGTGCAGAAAAATGTCGACT
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