CX295077

Overview
NameCX295077
Unique NameCX295077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: S35E1_DROME (Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 64/191 (33.51%), Postives = 113/191 (59.16%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKIS 567
            ++S   V VS+ HT+KA  P F    ++   G++ P  ++LSL P++ GV +A++TE+SF+  G ISA+IS + F+ ++I+SKK +  T++    +   +  ++LF+ +P  + ++   + +H    AI  +   + I+ LF  G+   L N +A + L  V PLT+AV +  KR+FVI  S+L  GN ++
Sbjct:   96 HISLWKVPVSYAHTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLISALISTMGFSMQNIFSKKVLKDTNIHHLRLLHLLGKLSLFIFLPLWLYMDSFAVFRH---TAIKNLD-YRVIALLFADGVLNWLQNIIAFSVLSLVTPLTYAVASASKRIFVIAVSLLILGNPVT 282          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: S35E2_HUMAN (Solute carrier family 35 member E2 OS=Homo sapiens GN=SLC35E2 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20
Identity = 62/227 (27.31%), Postives = 118/227 (51.98%), Query Frame = 1
Query:    4 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD----MDSTNIYAYISIIALFVCIPPAI-IVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQMKAA 669
            VS   VAVSF  T+K+  P F    S+ ILG+   L + LSL PV+ G+++ + TE+SFN  GF +A+ +NI    ++++SKK ++       +  +  Y S  A+ + +P  +   + P + + G S + ++  ++  ++D    G+ +HL +  A   + +++P+T +V + +K    I  S++ FGNKI++               Y+  +   +E  + + AA
Sbjct:  162 VSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLLLTD----GVLFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGVLLYNKARQHQQEALQSLAAA 384          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: S35E2_MOUSE (Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19
Identity = 61/194 (31.44%), Postives = 108/194 (55.67%), Query Frame = 1
Query:    4 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD----MDSTNIYAYISIIALFVCIPP-AIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKIST 570
            VS   VAVSF  T+K+  P F    S+ ILG+   L + LSL PV+ G+++ + TE+SFN  GF +A+ +NI    ++++SKK ++       +  +  Y S  A+ + IP     ++ P + + G S + S+  ++  ++D    G  +HL +  A   + +++P+T +V + +K    I  SI+ FGNKI++
Sbjct:  162 VSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNILGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVALLIPAWTFFMDIPVIGRSGKSFSYSQDIVLLLLTD----GALFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSIIVFGNKITS 351          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: S35E1_RAT (Solute carrier family 35 member E1 OS=Rattus norvegicus GN=Slc35e1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 60/222 (27.03%), Postives = 114/222 (51.35%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL-YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQ 657
            +VS   V VS+ HT+KA  P +    S+ I+ ++    ++LSL P++ GV +A++TELSF+  G +SA+ + + F+ ++I+SKK + D  +    +   +   A+F  IP  ++V+   L    +S  ++ V    +   L  V  F +   N +A + L  ++PL+++V N  KR+ VI  S++   N +++               Y+  K    ++ R+
Sbjct:  127 HVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVD---LSTFLVSSDLAYVSQWPWTLLLLVVSGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVIAVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARR 345          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: S35E1_MOUSE (Solute carrier family 35 member E1 OS=Mus musculus GN=Slc35e1 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 60/222 (27.03%), Postives = 114/222 (51.35%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL-YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQ 657
            +VS   V VS+ HT+KA  P +    S+ I+ ++    ++LSL P++ GV +A++TELSF+  G +SA+ + + F+ ++I+SKK + D  +    +   +   A+F  IP  ++V+   L    +S  ++ V    +   L  V  F +   N +A + L  ++PL+++V N  KR+ VI  S++   N +++               Y+  K    ++ R+
Sbjct:  127 HVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVD---LSTFLVSSDLAYVSQWPWTLLLLAVSGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARR 345          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: S35E1_HUMAN (Solute carrier family 35 member E1 OS=Homo sapiens GN=SLC35E1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17
Identity = 61/222 (27.48%), Postives = 114/222 (51.35%), Query Frame = 1
Query:    1 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL-YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKRQ 657
            +VS   V VS+ HT+KA  P +    S+ I+ ++    ++LSL P++ GV +A++TELSF+  G +SA+ + + F+ ++I+SKK + D  +    +   +   A+F  IP  ++V+   L    +S  ++ V    +   L  V  F +   N +A + L  V+PL+++V N  KR+ VI  S++   N +++               Y+  K    ++ R+
Sbjct:  127 HVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVD---LSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARK 345          
BLAST of CX295077 vs. ExPASy Swiss-Prot
Match: YG1B_SCHPO (Putative transporter C83.11 OS=Schizosaccharomyces pombe GN=SPBC83.11 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 55/189 (29.10%), Postives = 91/189 (48.15%), Query Frame = 1
Query:   19 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDS-----------TNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAF 552
            + VS  HT+KAL P F   A +F+         + SL P+  GV++A   ELS +  G + A+IS   F  ++I+  K   +  S            N+  Y S +A  V IP  +  EG           + +VG   F+ +L + G+ +   N LA   L  ++P+ +++ +++KR+FVI  SI+ F
Sbjct:   94 IPVSTVHTVKALSPLFTVLAYRFMFRHVYSAMTYFSLVPLTFGVTLACSFELSADIVGLLYALISTCIFVSQNIFGSKIFMEAKSHSTHTKKHYNKLNLLLYSSGVAFIVMIPVWLYQEG--------FAYLPEVGSPVFL-NLIYNGLSHFFQNILAFTLLSIISPVAYSIASLIKRIFVIVVSIIWF 273          
The following BLAST results are available for this feature:
BLAST of CX295077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
S35E1_DROME6.125e-2533.51Solute carrier family 35 member E1 homolog OS=Dros... [more]
S35E2_HUMAN3.478e-2027.31Solute carrier family 35 member E2 OS=Homo sapiens... [more]
S35E2_MOUSE1.012e-1931.44Solute carrier family 35 member E2 OS=Mus musculus... [more]
S35E1_RAT5.553e-1827.03Solute carrier family 35 member E1 OS=Rattus norve... [more]
S35E1_MOUSE9.472e-1827.03Solute carrier family 35 member E1 OS=Mus musculus... [more]
S35E1_HUMAN1.237e-1727.48Solute carrier family 35 member E1 OS=Homo sapiens... [more]
YG1B_SCHPO1.672e-1429.10Putative transporter C83.11 OS=Schizosaccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionC05068C12SK DroRLeaf1 Citrus clementina cDNA clone C05068C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295077 ID=CX295077; Name=CX295077; organism=Citrus clementina; type=EST; length=707bp
AACGTGTCTTTTGCAGCAGTTGCTGTCTCCTTTACCCATACCATCAAAGC
TCTTGAGCCCTTCTTCAACGCTGCTGCTTCACAATTCATTCTAGGCCAAC
AGTTACCTCTGACTCTGTGGCTGTCTCTTGCTCCTGTGGTTATTGGAGTG
TCAATGGCATCATTGACTGAGCTGTCGTTCAATTGGACGGGCTTCATTAG
TGCTATGATTTCCAACATATCGTTTACTTACAGGAGTATCTACTCCAAGA
AAGCCATGACTGATATGGACAGTACTAATATTTATGCCTATATTTCCATC
ATTGCGCTCTTTGTCTGTATTCCACCAGCCATCATTGTTGAGGGACCTCA
ACTGATTAAGCATGGCTTAAGTGATGCAATTTCCAAAGTGGGCATGGTCA
AGTTCATTTCAGATCTTTTTTGGGTGGGGATGTTTTACCACCTCTACAAT
CAGTTGGCTACCAACACCTTGGAGAGGGTTGCACCTCTTACTCATGCAGT
TGGCAATGTACTGAAACGTGTGTTTGTGATTGGGTTCTCAATCCTGGCCT
TTGGCAACAAGATCTCAACCCAAACTGGTATTGGAACAGTCATTGCAATT
GCTGGAGTGGCAGCCTACTCTTACATCAAGGCCCAAATGGAAGAAGAGAA
ACGACAAATGAAAGCAGCATGAGAAGAAAAGAAGCATGTGAATGAGGAAA
GGTCCCG
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