CX295083

Overview
NameCX295083
Unique NameCX295083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length749
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_STAA3 (Elongation factor Tu OS=Staphylococcus aureus (strain USA300) GN=tuf PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 79/231 (34.20%), Postives = 114/231 (49.35%), Query Frame = 2
Query:   11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRP 679
            KNMITG +Q D  +L++ +  G          QTREH LL+  +GV  ++   NK+D       +   + +  EV   L +  +  + VP +    +   EGD   E        K   L++A+D  I  P+R SDKP  +P++DV+ I G GTV  GRVE G +K G  V     GL     T V  VEM  + L  A  GDN+G  ++ VA +D++RG V +    I P
Sbjct:   90 KNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRNVGVPALVVFLNKVDMVD---DEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEE-------KILELMEAVDTYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEI--IGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITP 301          
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_STAA2 (Elongation factor Tu OS=Staphylococcus aureus (strain JH1) GN=tuf PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 79/231 (34.20%), Postives = 114/231 (49.35%), Query Frame = 2
Query:   11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRP 679
            KNMITG +Q D  +L++ +  G          QTREH LL+  +GV  ++   NK+D       +   + +  EV   L +  +  + VP +    +   EGD   E        K   L++A+D  I  P+R SDKP  +P++DV+ I G GTV  GRVE G +K G  V     GL     T V  VEM  + L  A  GDN+G  ++ VA +D++RG V +    I P
Sbjct:   90 KNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRNVGVPALVVFLNKVDMVD---DEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEE-------KILELMEAVDTYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEI--IGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITP 301          
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_STAA1 (Elongation factor Tu OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=tuf PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 79/231 (34.20%), Postives = 114/231 (49.35%), Query Frame = 2
Query:   11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRP 679
            KNMITG +Q D  +L++ +  G          QTREH LL+  +GV  ++   NK+D       +   + +  EV   L +  +  + VP +    +   EGD   E        K   L++A+D  I  P+R SDKP  +P++DV+ I G GTV  GRVE G +K G  V     GL     T V  VEM  + L  A  GDN+G  ++ VA +D++RG V +    I P
Sbjct:   90 KNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRNVGVPALVVFLNKVDMVD---DEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEE-------KILELMEAVDTYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEI--IGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITP 301          
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_PLARO (Elongation factor Tu OS=Planobispora rosea GN=tuf PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 77/235 (32.77%), Postives = 118/235 (50.21%), Query Frame = 2
Query:   11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRPGKLPTSPH 703
            KNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D    +      +  V+E+ S  +  G +   V    +   EGD     S          L++A+D NI EP R +DKP  +P++DV+ I G GTV  GR+E GV+K      ++       TT V S+EM ++ L E   GDN    ++ +  + ++RG     + +I+PG   T+PH
Sbjct:   92 KNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSAQEFPGDDLPVVRVSALKALEGDEKWADSII-------ELMNAVDENIPEPPRDTDKPFLMPIEDVFSITGRGTVVTGRIERGVVKVNEQVDIIGIKSEKTTTTVTSIEMFNKMLDEGHAGDNAALLLRGIKREQVERG-----QCIIKPG--TTTPH 305          
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_LACS1 (Elongation factor Tu OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=tuf PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 76/235 (32.34%), Postives = 114/235 (48.51%), Query Frame = 2
Query:   11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRPGKLPT 694
            KNMITG +Q D A+L++ +T G          QTREH LLA  +GV+ ++   NK D           D +  EV   L +  +  + +P +    +   EGD   E            L+D +D  I  P+RP+DKP  +P++DV+ I G GTV  GR++ G +K G    +V      + T V  VEM  + L E   GDN+G  ++ V    ++RG V     + +PG + T
Sbjct:   90 KNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYIVVFLNKCDLVD---DDELLDLVEMEVRDLLSEYDFPGDDIPVIRGSALKALEGDKDAEAQIM-------ELMDTVDEYIPTPQRPTDKPFLMPVEDVFTITGRGTVASGRIDRGTVKVGDEVEIVGLKDDVVKTTVTGVEMFRKTLDEGEAGDNIGALLRGVDRTQVERGQV-----LAKPGSIQT 302          
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_GEOUR (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 78/237 (32.91%), Postives = 117/237 (49.37%), Query Frame = 2
Query:   11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRPGKLPTSPH 703
            KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D       +   + +  E+   L    +  + +P +    +   EGD     +  L       L++A+D+ I EP R  DKP  +P++DV+ I G GTV  GRVE G++K G  V       T  T V  VEM  + L E   GDN+G  ++ V  +D++RG V     + +PG +  +PH
Sbjct:   90 KNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKALEGD-----TGELGEQAIMKLMEAVDSYIPEPVRAIDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGEEVEIVGMKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQV-----LAKPGSI--TPH 304          
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSW (Elongation factor Tu OS=Geobacillus sp. (strain WCH70) GN=tuf PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 78/238 (32.77%), Postives = 119/238 (50.00%), Query Frame = 2
Query:   11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRPGKLPTSPH 703
            KNMITG +Q D A+L++ +  G          QTREH LL+  +GV  ++   NK D       +   + +  EV   L +  +  ++VP +    +   EGD   E        K   L++A+D  I  P+R  DKP  +P++DV+ I G GTV  GRVE G LK G    +V       +T V  VEM  + L +A  GDN+G  ++ V+  +++RG V     + +PG +  +PH
Sbjct:   90 KNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALEGDPQWEE-------KIIELMNAVDEYIPTPQREIDKPFMMPIEDVFSITGRGTVATGRVERGTLKVGDAVEIVGLADEPKSTTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVERGQV-----LAKPGSI--TPH 303          
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_ERYLH (Elongation factor Tu OS=Erythrobacter litoralis (strain HTCC2594) GN=tuf PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 78/237 (32.91%), Postives = 122/237 (51.48%), Query Frame = 2
Query:   11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-MVVTFGPSGLT-TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRPGKLPTSPH 703
            KNMITG +Q D A+L++++  G          QTREH LL+  +GV  ++   NK+D       +   + +  EV   L +  ++ + +P V    ++  EG     R  N+       L+ A+D +I +P+RP D+   +P++DV+ I G GTV  GRVETGV+  G  V   G    T T V  VEM  + L     GDN+G  ++ V  +D++RG V     + +PG +  +PH
Sbjct:   90 KNMITGAAQMDGAILVVNAADGPMP-------QTREHILLSRQVGVPALVVYLNKVDQVD---DEELLELVELEVRELLSEYDFDGDNIPIVKGSALAALEG-----RDDNIGKESIVELMKAVDEHIPQPERPVDQDFLMPIEDVFSISGRGTVVTGRVETGVVNVGDEVEIVGIKDTTKTTVTGVEMFRKLLDRGEAGDNIGALIRGVGREDVERGQV-----LAKPGSV--TPH 304          
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_CHAVU (Elongation factor Tu, chloroplastic OS=Chara vulgaris GN=tufA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 77/235 (32.77%), Postives = 115/235 (48.94%), Query Frame = 2
Query:   11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS-----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRP 679
            KNMITG +Q D A+L++ +  G          QT+EH LLA  +GV  ++   NK D    +      D    EV   L    +  +KVP V  S       +    N       W  K   L+DA+D+ I  PKR  +KP  +P++DV+ I G GTV  GR+E G+LK G +V     GL  +++S     +EM    L++   G+N+G  ++ +  KD++RG V +    I P
Sbjct:   90 KNMITGAAQMDGAILVVSAADGPMP-------QTKEHILLAKQVGVPSIVVFLNKEDQVDDEEILQLVD---LEVRESLINYEFPGDKVPVVAGSALMALQALTEKPNTLRGENKWVDKIYELMDAVDSYIPTPKRDIEKPFLMPIEDVFSIQGRGTVATGRIERGILKLGDIVEL--IGLNEKIRSTVVTGLEMFRRLLEQGFAGENIGVLLRGIEKKDIERGMVIAQPGTIEP 312          
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_CAMC5 (Elongation factor Tu OS=Campylobacter curvus (strain 525.92) GN=tuf PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 75/231 (32.47%), Postives = 116/231 (50.22%), Query Frame = 2
Query:   11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRP 679
            KNMITG +Q D A+L++ +  G          QTREH LL+  +GV  ++   NK D        A   E+V+ E+   L +  +  +  P   ISG     + E    +D      +L+ +D ++E    P R +DK   +P++DV+ I G GTV  GR+E GV+K G    +V   P+  TT V  VEM  + +++   GDNVG  ++    +D++RG V    + I P
Sbjct:   90 KNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFMNKADMV----DDAELLELVEMEIRELLNEYNFPGDDTPI--ISGSALKALEEAKAGVDGEWSAKVLELMDKVDEYIPTPVRATDKDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKPT-QTTTVTGVEMFRKEMEQGEAGDNVGVLLRGTKKEDVERGMVLCKPKSITP 306          
The following BLAST results are available for this feature:
BLAST of CX295083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_STAA35.348e-2234.20Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAA25.348e-2234.20Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAA15.348e-2234.20Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_PLARO5.348e-2232.77Elongation factor Tu OS=Planobispora rosea GN=tuf ... [more]
EFTU_LACS15.348e-2232.34Elongation factor Tu OS=Lactobacillus salivarius s... [more]
EFTU_GEOUR5.348e-2232.91Elongation factor Tu OS=Geobacter uraniireducens (... [more]
EFTU_GEOSW5.348e-2232.77Elongation factor Tu OS=Geobacillus sp. (strain WC... [more]
EFTU_ERYLH5.348e-2232.91Elongation factor Tu OS=Erythrobacter litoralis (s... [more]
EFTU_CHAVU5.348e-2232.77Elongation factor Tu, chloroplastic OS=Chara vulga... [more]
EFTU_CAMC55.348e-2232.47Elongation factor Tu OS=Campylobacter curvus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC05068D06SK DroRLeaf1 Citrus clementina cDNA clone C05068D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295083 ID=CX295083; Name=CX295083; organism=Citrus clementina; type=EST; length=749bp
GTGACTTTATAAGAACATGATTACCGGTCCCTCACAGGCTGACTGTGCCG
TCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCAAG
GATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAA
GCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTACT
CAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGAAG
AAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTT
CGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAAGG
GTCCAACCCTGCTGGACGCTCTTGACAATATCAATGAGCCAAAGAGGCCC
TCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGTGG
CATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCCTG
GTATGGTGGTGACATTTGGCCCCTCTGGATTGACAACTGAGGTTAAGTCT
GTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCTTCCGGGTGACAATGT
TGGCTTCAACGTGAAGAACGTTGCTGTCAAGGATCTCAAGCGTGGTTTTG
TTGCTTCCACTCGAAGGATGATCCGGCCAGGGAAGCTGCCAACTTCACCT
CACAGGTCATCATCATGAACCACCCTGGGCAGATTGGAAATGGATATGC
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