CX295083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_STAA3 (Elongation factor Tu OS=Staphylococcus aureus (strain USA300) GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 79/231 (34.20%), Postives = 114/231 (49.35%), Query Frame = 2 Query: 11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRP 679 KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK+D + + + EV L + + + VP + + EGD E K L++A+D I P+R SDKP +P++DV+ I G GTV GRVE G +K G V GL T V VEM + L A GDN+G ++ VA +D++RG V + I P Sbjct: 90 KNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRNVGVPALVVFLNKVDMVD---DEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEE-------KILELMEAVDTYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEI--IGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITP 301
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_STAA2 (Elongation factor Tu OS=Staphylococcus aureus (strain JH1) GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 79/231 (34.20%), Postives = 114/231 (49.35%), Query Frame = 2 Query: 11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRP 679 KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK+D + + + EV L + + + VP + + EGD E K L++A+D I P+R SDKP +P++DV+ I G GTV GRVE G +K G V GL T V VEM + L A GDN+G ++ VA +D++RG V + I P Sbjct: 90 KNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRNVGVPALVVFLNKVDMVD---DEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEE-------KILELMEAVDTYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEI--IGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITP 301
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_STAA1 (Elongation factor Tu OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 79/231 (34.20%), Postives = 114/231 (49.35%), Query Frame = 2 Query: 11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRP 679 KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK+D + + + EV L + + + VP + + EGD E K L++A+D I P+R SDKP +P++DV+ I G GTV GRVE G +K G V GL T V VEM + L A GDN+G ++ VA +D++RG V + I P Sbjct: 90 KNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRNVGVPALVVFLNKVDMVD---DEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEE-------KILELMEAVDTYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEI--IGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITP 301
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_PLARO (Elongation factor Tu OS=Planobispora rosea GN=tuf PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 77/235 (32.77%), Postives = 118/235 (50.21%), Query Frame = 2 Query: 11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRPGKLPTSPH 703 KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + V+E+ S + G + V + EGD S L++A+D NI EP R +DKP +P++DV+ I G GTV GR+E GV+K ++ TT V S+EM ++ L E GDN ++ + + ++RG + +I+PG T+PH Sbjct: 92 KNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSAQEFPGDDLPVVRVSALKALEGDEKWADSII-------ELMNAVDENIPEPPRDTDKPFLMPIEDVFSITGRGTVVTGRIERGVVKVNEQVDIIGIKSEKTTTTVTSIEMFNKMLDEGHAGDNAALLLRGIKREQVERG-----QCIIKPG--TTTPH 305
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_LACS1 (Elongation factor Tu OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 76/235 (32.34%), Postives = 114/235 (48.51%), Query Frame = 2 Query: 11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRPGKLPT 694 KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D D + EV L + + + +P + + EGD E L+D +D I P+RP+DKP +P++DV+ I G GTV GR++ G +K G +V + T V VEM + L E GDN+G ++ V ++RG V + +PG + T Sbjct: 90 KNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYIVVFLNKCDLVD---DDELLDLVEMEVRDLLSEYDFPGDDIPVIRGSALKALEGDKDAEAQIM-------ELMDTVDEYIPTPQRPTDKPFLMPVEDVFTITGRGTVASGRIDRGTVKVGDEVEIVGLKDDVVKTTVTGVEMFRKTLDEGEAGDNIGALLRGVDRTQVERGQV-----LAKPGSIQT 302
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_GEOUR (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 78/237 (32.91%), Postives = 117/237 (49.37%), Query Frame = 2 Query: 11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRPGKLPTSPH 703 KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P + + EGD + L L++A+D+ I EP R DKP +P++DV+ I G GTV GRVE G++K G V T T V VEM + L E GDN+G ++ V +D++RG V + +PG + +PH Sbjct: 90 KNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKALEGD-----TGELGEQAIMKLMEAVDSYIPEPVRAIDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGEEVEIVGMKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQV-----LAKPGSI--TPH 304
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSW (Elongation factor Tu OS=Geobacillus sp. (strain WCH70) GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 78/238 (32.77%), Postives = 119/238 (50.00%), Query Frame = 2 Query: 11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRPGKLPTSPH 703 KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK D + + + EV L + + ++VP + + EGD E K L++A+D I P+R DKP +P++DV+ I G GTV GRVE G LK G +V +T V VEM + L +A GDN+G ++ V+ +++RG V + +PG + +PH Sbjct: 90 KNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALEGDPQWEE-------KIIELMNAVDEYIPTPQREIDKPFMMPIEDVFSITGRGTVATGRVERGTLKVGDAVEIVGLADEPKSTTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVERGQV-----LAKPGSI--TPH 303
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_ERYLH (Elongation factor Tu OS=Erythrobacter litoralis (strain HTCC2594) GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 78/237 (32.91%), Postives = 122/237 (51.48%), Query Frame = 2 Query: 11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-MVVTFGPSGLT-TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRPGKLPTSPH 703 KNMITG +Q D A+L++++ G QTREH LL+ +GV ++ NK+D + + + EV L + ++ + +P V ++ EG R N+ L+ A+D +I +P+RP D+ +P++DV+ I G GTV GRVETGV+ G V G T T V VEM + L GDN+G ++ V +D++RG V + +PG + +PH Sbjct: 90 KNMITGAAQMDGAILVVNAADGPMP-------QTREHILLSRQVGVPALVVYLNKVDQVD---DEELLELVELEVRELLSEYDFDGDNIPIVKGSALAALEG-----RDDNIGKESIVELMKAVDEHIPQPERPVDQDFLMPIEDVFSISGRGTVVTGRVETGVVNVGDEVEIVGIKDTTKTTVTGVEMFRKLLDRGEAGDNIGALIRGVGREDVERGQV-----LAKPGSV--TPH 304
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_CHAVU (Elongation factor Tu, chloroplastic OS=Chara vulgaris GN=tufA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 77/235 (32.77%), Postives = 115/235 (48.94%), Query Frame = 2 Query: 11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS-----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRP 679 KNMITG +Q D A+L++ + G QT+EH LLA +GV ++ NK D + D EV L + +KVP V S + N W K L+DA+D+ I PKR +KP +P++DV+ I G GTV GR+E G+LK G +V GL +++S +EM L++ G+N+G ++ + KD++RG V + I P Sbjct: 90 KNMITGAAQMDGAILVVSAADGPMP-------QTKEHILLAKQVGVPSIVVFLNKEDQVDDEEILQLVD---LEVRESLINYEFPGDKVPVVAGSALMALQALTEKPNTLRGENKWVDKIYELMDAVDSYIPTPKRDIEKPFLMPIEDVFSIQGRGTVATGRIERGILKLGDIVEL--IGLNEKIRSTVVTGLEMFRRLLEQGFAGENIGVLLRGIEKKDIERGMVIAQPGTIEP 312
BLAST of CX295083 vs. ExPASy Swiss-Prot
Match: EFTU_CAMC5 (Elongation factor Tu OS=Campylobacter curvus (strain 525.92) GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 75/231 (32.47%), Postives = 116/231 (50.22%), Query Frame = 2 Query: 11 KNMITGPSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASTRRMIRP 679 KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK D A E+V+ E+ L + + + P ISG + E +D +L+ +D ++E P R +DK +P++DV+ I G GTV GR+E GV+K G +V P+ TT V VEM + +++ GDNVG ++ +D++RG V + I P Sbjct: 90 KNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFMNKADMV----DDAELLELVEMEIRELLNEYNFPGDDTPI--ISGSALKALEEAKAGVDGEWSAKVLELMDKVDEYIPTPVRATDKDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKPT-QTTTVTGVEMFRKEMEQGEAGDNVGVLLRGTKKEDVERGMVLCKPKSITP 306 The following BLAST results are available for this feature:
BLAST of CX295083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295083 ID=CX295083; Name=CX295083; organism=Citrus clementina; type=EST; length=749bpback to top |