CX295218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_STAA8 (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain NCTC 8325) GN=odhA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 38/123 (30.89%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPN-AEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 + ++IL +GK++ +L E K+ + + +E+L PFP + ++ L + PN EV W QEEP N GA+ Y+ P + + D+ Y GR AA A G ++H Q+++++ A++ Sbjct: 813 VTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYPYVKVLV-----ADKYDLSYHGRIQRAAPAEGDGEIHKLVQNKIIENALK 930
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_STAA3 (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain USA300) GN=odhA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 38/123 (30.89%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPN-AEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 + ++IL +GK++ +L E K+ + + +E+L PFP + ++ L + PN EV W QEEP N GA+ Y+ P + + D+ Y GR AA A G ++H Q+++++ A++ Sbjct: 813 VTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYPYVKVLV-----ADKYDLSYHGRIQRAAPAEGDGEIHKLVQNKIIENALK 930
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_STAA2 (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain JH1) GN=odhA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 38/123 (30.89%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPN-AEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 + ++IL +GK++ +L E K+ + + +E+L PFP + ++ L + PN EV W QEEP N GA+ Y+ P + + D+ Y GR AA A G ++H Q+++++ A++ Sbjct: 813 VTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYPYVKVLV-----ADKYDLSYHGRIQRAAPAEGDGEIHKLVQNKIIENALK 930
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_STAA1 (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=odhA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 38/123 (30.89%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPN-AEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 + ++IL +GK++ +L E K+ + + +E+L PFP + ++ L + PN EV W QEEP N GA+ Y+ P + + D+ Y GR AA A G ++H Q+++++ A++ Sbjct: 813 VTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYPYVKVLV-----ADKYDLSYHGRIQRAAPAEGDGEIHKLVQNKIIENALK 930
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_STAS1 (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=odhA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 41/121 (33.88%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAE-VVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 ++++IL SGK++ +L E K+ I + VE+L PFP D + L PN E V W QEEP N GA++++ P L D+ D+ Y GR +A A G ++H Q+ +++++ Sbjct: 814 VKKVILASGKMFIDLKEYLTKNPNKSILLVAVERLYPFPADEIDALLSELPNLEHVAWVQEEPKNQGAWSFVYPYL--KELTTDK---YDLSYHGRIQRSAPAEGDGEIHKLVQNMIIEQS 929
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_OCEIH (2-oxoglutarate dehydrogenase E1 component OS=Oceanobacillus iheyensis GN=odhA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 42/137 (30.66%), Postives = 74/137 (54.01%), Query Frame = 2 Query: 38 IKDQNEHSDLEEGIRRLILCSGKVYYELYE--ERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 ++DQ E + RL++ SGK+ ++ E + + + I RVEQ+ PFP ++ E+K+ PN E+VW QEEP NMGA+ ++ L + + +K + R +A A G VH Q++++++A+ Sbjct: 810 LRDQPGFEANREKVTRLVVGSGKMMIDIEEAMDDSDETYDWLQIKRVEQIYPFPKKALEEEIKQLPNLKEIVWVQEEPKNMGAWNFVDDYLRELLNEDQK-----LKVISRPDRSAPAGGIPTVHKTAQNKIIKQAL 941
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_STAAU (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus GN=odhA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 37/123 (30.08%), Postives = 67/123 (54.47%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPN-AEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 + ++IL +GK++ +L E K+ + + +E+L PFP + ++ L + P EV W QEEP N GA+ Y+ P + + D+ Y GR AA A G ++H Q+++++ A++ Sbjct: 813 VTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPKLEEVSWVQEEPKNQGAWLYVYPYVKVLV-----ADKYDLSYHGRIQRAAPAEGDGEIHKLVQNKIIENALK 930
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_STAAN (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain N315) GN=odhA PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 37/123 (30.08%), Postives = 67/123 (54.47%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPN-AEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 + ++IL +GK++ +L E K+ + + +E+L PFP + ++ L + P EV W QEEP N GA+ Y+ P + + D+ Y GR AA A G ++H Q+++++ A++ Sbjct: 791 VTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPKLEEVSWVQEEPKNQGAWLYVYPYVKVLV-----ADKYDLSYHGRIQRAAPAEGDGEIHKLVQNKIIENALK 908 The following BLAST results are available for this feature:
BLAST of CX295218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295218 ID=CX295218; Name=CX295218; organism=Citrus clementina; type=EST; length=708bpback to top |