CX295218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_BRUMB (2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=sucA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 56/133 (42.11%), Postives = 84/133 (63.16%), Query Frame = 2 Query: 41 KDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 KD+ + IRR++LCSGKVYY+LYEER+K D+ + RVEQL PFP + EL R+ +AE+VW QEEP NMGA+++I P L + +D + ++Y GR +A+ ATG H+ + + ++ A+ Sbjct: 872 KDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_BRUC2 (2-oxoglutarate dehydrogenase E1 component OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=sucA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 56/133 (42.11%), Postives = 84/133 (63.16%), Query Frame = 2 Query: 41 KDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 KD+ + IRR++LCSGKVYY+LYEER+K D+ + RVEQL PFP + EL R+ +AE+VW QEEP NMGA+++I P L + +D + ++Y GR +A+ ATG H+ + + ++ A+ Sbjct: 872 KDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_DICDI (2-oxoglutarate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=ogdh PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = 2 Query: 71 EGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 E I R++ C+G+VYY L R+ ++ D+AI RVEQL PFP+DLV +L+ YPNA+ +W QEEPMNMG + YI P + K ++R DI Y GR SA+ A + +H + + A+ Sbjct: 886 EKINRIVFCTGQVYYNLIASRESNNIKDVAIIRVEQLHPFPFDLVAEQLQHYPNAKAIWCQEEPMNMGYWNYIYPYFISTFKHINRPA--DITYTGRPSSASPAVASHTLHKLQLENFLSNAL 1006
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: DHTK1_DICDI (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Dictyostelium discoideum GN=odhA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 58/138 (42.03%), Postives = 85/138 (61.59%), Query Frame = 2 Query: 17 GTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELM 427 GT F+ ++ D + ++ I+R+I CSGKV+Y+L EERK + +D+AI R+EQ+ PFPY +Q E+ RY NA + W QEE N G ++++ PR + IKY+GR P AASA G +H KE S+L+ Sbjct: 763 GTHFQTVLSDPDTINNAST-IKRVIFCSGKVFYDLQEERKAKNFNDVAIIRLEQIAPFPYQRIQEEINRYSNATKFAWVQEEQQNGGCWSFVEPRFKQRYPQTSQ-----IKYIGRPPLAASAIGISSIHKKEVSQLL 894
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_COXBU (2-oxoglutarate dehydrogenase E1 component OS=Coxiella burnetii GN=sucA PE=3 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23 Identity = 63/143 (44.06%), Postives = 93/143 (65.03%), Query Frame = 2 Query: 23 RFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSA--SDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 + K LI + +H + I R+ILCSGKVYY+L +R++H + IA+ R+EQL PFPYD ++ EL++YPNA +V+W QEEP N GA+ RL M+ D T+E YVGR+ AA A G+ ++VK Q +L+ +A++ Sbjct: 798 QLKLLIPEIEKHDPKK--ITRVILCSGKVYYDLLAKRREHKGKLNHIAMIRIEQLYPFPYDELKAELEKYPNAKQVIWCQEEPKNQGAWFCTRHRLIKCMR--DDQTLE---YVGRSAFAAPAAGYSALYVKLQEQLVNQALE 933
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_RICBR (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia bellii (strain RML369-C) GN=sucA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23 Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 I ++ILCSGKVYY+L+E R +S+ IAI R+EQL PF +V LK+Y A E +W QEEPMNMGA+ YI L A+K + G + KY+GR SA+ A G Q H K+Q +L+++A+ Sbjct: 807 ITKVILCSGKVYYDLFEMRGSNSS--IAIIRLEQLYPFEKKVVVELLKKYNKASEFIWCQEEPMNMGAWRYITSHLNNALK--EAGINNEFKYIGREESASPAVGSLQAHNKQQEKLLKEAL 924
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_RALEH (2-oxoglutarate dehydrogenase E1 component OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=odhA PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23 Identity = 55/130 (42.31%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 53 EHSDLEEG-IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 +H +L ++R+I+CSGKVYY+L RK+ A+D A+ R+EQL PFP+ V ELK+YPNA E+VW Q+EP N GA+ ++ + M+ + G + + Y GR SA+ A G+Y H ++Q L++ A Sbjct: 815 DHEELNASKVKRVIMCSGKVYYDLVNTRKEREANDTAVIRLEQLYPFPHKAVAAELKKYPNATEIVWCQDEPQNQGAWFFVQHYI---MENMTDG--QKLGYAGRPASASPAVGYYAKHNEQQKALLEAA 939
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_SCHPO (2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=kgd1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 56/140 (40.00%), Postives = 87/140 (62.14%), Query Frame = 2 Query: 32 RLIKDQNEHSDL---EEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPN-AEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 +LI ++ EH E I +LI+CSG+V+ L + R+++ +IAI RVEQL PF + + + +YPN E++W QEEP+N GA+TY+ PR+ T +K + R ++Y GR PSA+ A G Q H+ EQ + + A+ Sbjct: 871 KLILEEEEHGKSILPPEKIEKLIICSGQVWVALSKAREENKIDNIAITRVEQLHPFGWKQMAANISQYPNLKEIIWCQEEPLNAGAWTYMEPRIYTILKHLGRDL--PVRYAGRPPSASVAAGNKQQHLAEQEQFLNDAL 1008
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_RICCN (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia conorii GN=sucA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 59/122 (48.36%), Postives = 78/122 (63.93%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 I ++ILCSGKVYY+L+E R +S +IAI R+EQL PF LV LK+Y E +W QEEP NMG + YI L A+K + G + KYVGR SA+ A G QVH K+Q +L++ A+ Sbjct: 809 ITKVILCSGKVYYDLFEMRGNNS--NIAIIRLEQLYPFEKKLVASLLKKYNRTQEFIWCQEEPKNMGTWCYIVSHLNDALK--EAGIKNEFKYVGREESASPAVGSLQVHNKQQEKLLRTAL 926
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_RICTY (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia typhi GN=sucA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 58/125 (46.40%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 68 EEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEV-VWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 + I ++ILCSGKVYY+L+ +R +S +I I R+EQL PF LV LK+Y A+ +W QEEP NMGA+ YIA L A+K + + KYVGR SA+ A G QVH K+Q +L+ +A+ Sbjct: 807 KNNITKVILCSGKVYYDLFAKRVHNS--NIVIIRLEQLYPFEKTLVASLLKKYNKAQAFIWCQEEPKNMGAWNYIAEHLNDALKEAE--INNEFKYVGREESASPAVGSLQVHNKQQEKLLMEAL 927 The following BLAST results are available for this feature:
BLAST of CX295218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295218 ID=CX295218; Name=CX295218; organism=Citrus clementina; type=EST; length=708bpback to top |