CX295218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_RICFE (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia felis GN=sucA PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 58/122 (47.54%), Postives = 78/122 (63.93%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 I ++ILCSGKVYY+L+E R +S +IAI R+EQL PF LV LK+Y E +W QEEP NMGA+ YI L +K + G + KYVGR SA+ A G Q H K+Q +L+++A+ Sbjct: 858 ITKVILCSGKVYYDLFEMRGNNS--NIAIIRLEQLYPFEKKLVASLLKKYNRTQEFIWCQEEPKNMGAWRYIVSHLNDVLK--EAGINNEFKYVGREESASPAVGSLQAHNKQQEKLLKEAL 975
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_RICPR (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia prowazekii GN=sucA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEV-VWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 + ++ILCSGKVYY+L+ R +S +I I R+EQL PF LV LK+Y A+ +W QEEP NMGA+ YIA L A+K + + KYVGR SA+ A G QVH K+Q +L+ +A+ Sbjct: 809 VTKVILCSGKVYYDLFAMRTNNS--NIVIIRLEQLYPFEKKLVASLLKKYNKAQAFIWCQEEPKNMGAWHYIATHLNDALKEAEINN--EFKYVGREESASPAVGSLQVHNKQQEKLLMEAL 926
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: DHTK1_DROME (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Drosophila melanogaster GN=CG1544 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21 Identity = 53/120 (44.17%), Postives = 73/120 (60.83%), Query Frame = 2 Query: 71 EGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAE-VVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELM 427 E +R++ILCSGK YY L EER+K A D AI R+E LCPFP +Q +L +Y N + VWSQEE NMGA+T++ PR + + + Y GR + ATG +VH +E E++ Sbjct: 801 EQVRKVILCSGKHYYTLAEEREKRQAYDTAILRLESLCPFPIQELQAQLAQYGNVQSFVWSQEEHRNMGAWTFVRPRF-------ENLIGQQLHYCGRCEAPTPATGIGKVHKREVDEIV 913
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_ECOLI (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli (strain K12) GN=sucA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 50/127 (39.37%), Postives = 83/127 (65.35%), Query Frame = 2 Query: 71 EGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPE 448 +G++R+++CSGKVYY+L E+R+K++ D+AI R+EQL PFP+ +Q L+++ + + VW QEEP+N GA+ Y + + + G ++Y GR SA+ A G+ VH K+Q +L+ A+ E Sbjct: 812 KGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAW-YCSQH--HFREVIPFGA--SLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE 933
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_ECOL6 (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli O6 GN=sucA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 50/127 (39.37%), Postives = 83/127 (65.35%), Query Frame = 2 Query: 71 EGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPE 448 +G++R+++CSGKVYY+L E+R+K++ D+AI R+EQL PFP+ +Q L+++ + + VW QEEP+N GA+ Y + + + G ++Y GR SA+ A G+ VH K+Q +L+ A+ E Sbjct: 812 KGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAW-YCSQH--HFREVIPFGA--SLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE 933
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_ECO57 (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli O157:H7 GN=sucA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 50/127 (39.37%), Postives = 83/127 (65.35%), Query Frame = 2 Query: 71 EGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPE 448 +G++R+++CSGKVYY+L E+R+K++ D+AI R+EQL PFP+ +Q L+++ + + VW QEEP+N GA+ Y + + + G ++Y GR SA+ A G+ VH K+Q +L+ A+ E Sbjct: 812 KGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAW-YCSQH--HFREVIPFGA--SLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE 933
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_YEAST (2-oxoglutarate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=KGD1 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.561e-20 Identity = 52/142 (36.62%), Postives = 81/142 (57.04%), Query Frame = 2 Query: 26 FKRLIKDQNEHSDL--EEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAE-VVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 F+ +I+D + +E +RL+L SG+VY L++ R+ A ++EQL PFP+ ++ L YPN E +VW QEEP+NMG++ Y PRL T +K D+ ++Y GR PS A A G +H+ E+ ++ Q Sbjct: 871 FQWIIEDIEHGKSIGTKEETKRLVLLSGQVYTALHKRRESLGDKTTAFLKIEQLHPFPFAQLRDSLNSYPNLEEIVWCQEEPLNMGSWAYTEPRLHTTLKETDKYKDFKVRYCGRNPSGAVAAGSKSLHLAEEDAFLKDVFQ 1012
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_HAEIN (2-oxoglutarate dehydrogenase E1 component OS=Haemophilus influenzae GN=sucA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20 Identity = 47/122 (38.52%), Postives = 80/122 (65.57%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPN-AEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 ++R+++CSGKVYY+L E+R+ ++ D+AI R+EQL PFP++ V++ L+ Y + + VW QEEP+N GA+ +A+ + +KY GR SA+ A G+ +H K+Q +L++ A+ Sbjct: 817 VKRVVMCSGKVYYDLLEQRRANNQKDVAIIRIEQLYPFPHEDVKKALEPYAHVTDYVWCQEEPLNQGAWYCSKHNFESAIPESVK-----LKYAGRPASASPAVGYMSLHTKQQKQLVEDAL 933
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: DHTK1_XENLA (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Xenopus laevis GN=dhtkd1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 53/144 (36.81%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 17 GTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKK--HSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 G F+ +I D + + + ++ILCSGK YY L+++R+ AI RVE+LCPFP + +Q+E+ RYP A + +WSQEEP NMGA+T++APR ++ ++ V R A A G +H ++Q E+ K + Sbjct: 793 GKTFRSVIGDSSADP---KSVSKVILCSGKHYYALHKQREALGEQGRSSAIIRVEELCPFPLEALQQEIHRYPKAKDFIWSQEEPQNMGAWTFVAPRF-------EKQLACKLRLVSRPALPAPAVGIGTLHQQQQEEITVKTL 926
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: DHTK1_MOUSE (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Mus musculus GN=Dhtkd1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 17 GTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEER-----KKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQK 433 GT FK +I D + + ++ LI CSGK +Y L ++R KKH D AI R+E+LCPFP D +Q+E+ +Y + +V+WSQEEP NMG +++++PR ++ ++ V R P A A G VH ++ +++ K Sbjct: 786 GTAFKPVIGDSSVDP---KNVKTLIFCSGKHFYALLKQRESLGTKKH---DFAIIRLEELCPFPLDALQQEMSKYKHVRDVIWSQEEPQNMGPWSFVSPRF-------EKQLACRLRLVSRPPLPAPAVGIGTVHQQQHEDILSK 917 The following BLAST results are available for this feature:
BLAST of CX295218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295218 ID=CX295218; Name=CX295218; organism=Citrus clementina; type=EST; length=708bpback to top |