CX295218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_AZOVI (2-oxoglutarate dehydrogenase E1 component OS=Azotobacter vinelandii GN=sucA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 50/121 (41.32%), Postives = 74/121 (61.16%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAE-VVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 + RL+LCSGKVYY+L ++R DIAI R+EQL PFP + + + Y N + VVW QEEPMN GA+ Y + + + + + ++Y GR SAA A G+ +H ++Q +L+Q A Sbjct: 822 VERLVLCSGKVYYDLLDKRHAEGREDIAIVRIEQLYPFPEEELAEVMAPYTNLKHVVWCQEEPMNQGAW-YCSQHHMRRVASAHKKEL-FLQYAGREASAAPACGYASMHAEQQEKLLQDA 940
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: DHTK1_HUMAN (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Homo sapiens GN=DHTKD1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18 Identity = 49/142 (34.51%), Postives = 81/142 (57.04%), Query Frame = 2 Query: 17 GTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSAS--DIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQK 433 GT F +I D + + ++ L+ CSGK +Y L ++R+ A D AI RVE+LCPFP D +Q+E+ +Y + + +WSQEEP NMG +++++PR ++ ++ VGR P A G VH+ + +++ K Sbjct: 785 GTTFNPVIGDSSVDP---KKVKTLVFCSGKHFYSLVKQRESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWSFVSPRF-------EKQLACKLRLVGRPPLPVPAVGIGTVHLHQHEDILAK 916
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_EXISA (2-oxoglutarate dehydrogenase E1 component OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=odhA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 50/133 (37.59%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 71 EGIRRLILCSGKVYYELYEE--RKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQPEPIGN 460 E + RL+ C+GK+ +L E + + S + I RVE++ PFP ++ + RYPNA E+VW QEEP NMGA+TYI PRL +AV + D++Y+GR ++ A G H +EQ+ ++++A+ + + + Sbjct: 812 EKVERLVFCTGKMAIDLAEAVGKSEESLDFLHIVRVEEIYPFPVREIRDVISRYPNAREIVWVQEEPKNMGAWTYIEPRL----EAVTTNRL-DVRYIGRRRRSSPAEGNPTAHKQEQARIIREALSRDVVSS 939
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_BUCAP (2-oxoglutarate dehydrogenase E1 component OS=Buchnera aphidicola subsp. Schizaphis graminum GN=sucA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = 2 Query: 26 FKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 FK +I NE ++ ++R+I CSGK+YY+L E R K +++ + R+EQL PFP D + LK Y + +W QEEP N GA+ YI L T + + YV R +A+ A G +H KEQ +L+ A Sbjct: 788 FKNVI---NEIDKNQKEVKRIIFCSGKIYYDLLEYRNKCDINNVLLIRIEQLYPFPKDEILTILKSYSYVQDFIWCQEEPHNQGAWFYIKDLLSTLLP-----LNSHLNYVSRPSAASPAAGHILIHRKEQEKLINNA 917
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: DHTK1_PONAB (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Pongo abelii GN=DHTKD1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 49/142 (34.51%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 17 GTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSAS--DIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQK 433 GT F +I D + + ++ L+ CSGK +Y L ++R+ A D AI RVE+LCPFP D +Q+E+ +Y + + +WSQEEP NMG + +++PR ++ ++ VGR P A G VH+ + +++ K Sbjct: 785 GTTFNPVIGDSSVDP---KKVKTLVFCSGKHFYSLMKQRESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWLFVSPRF-------EKQLACKLRLVGRPPLPVPAVGIGTVHLHQHEDILAK 916
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: DHTK1_RAT (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Rattus norvegicus GN=Dhtkd1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 50/142 (35.21%), Postives = 81/142 (57.04%), Query Frame = 2 Query: 17 GTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSAS--DIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQK 433 GT FK +I D + + ++ LI CSGK +Y L ++R+ A D AI R+E+LCPFP D +Q+E+ +Y + +++WSQEEP NMG ++++ PR ++ ++ V R P A A G VH ++ ++ K Sbjct: 785 GTAFKPVIGDSSVDP---KNVKTLIFCSGKHFYALLKQRESLGAKKRDFAIIRLEELCPFPLDSLQQEMGKYKHVQDIIWSQEEPQNMGPWSFVYPRF-------EKQLACKLRLVSRPPLPAPAVGIGTVHQQQHEAILFK 916
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_GEOSW (2-oxoglutarate dehydrogenase E1 component OS=Geobacillus sp. (strain WCH70) GN=odhA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17 Identity = 53/134 (39.55%), Postives = 77/134 (57.46%), Query Frame = 2 Query: 44 DQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASD-IAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 +Q + E + R+ILC+GK +L E+ K D + I RVE+L PFP + +Q RYPN E++W+QEEP NMG++ Y+ P+L A D D+ Y+GR A+ A G VH KEQ ++Q A+ Sbjct: 819 EQKGLGENREKVERIILCTGKFAIDLAEQINKMEGLDWLHIVRVEELYPFPKEELQAIFARYPNVKEIIWAQEEPKNMGSWCYVEPKLREI--APDE---VDVSYIGRRRRASPAEGDPVVHRKEQERIIQCAL 947
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_BUCAI (2-oxoglutarate dehydrogenase E1 component OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=sucA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 45/120 (37.50%), Postives = 69/120 (57.50%), Query Frame = 2 Query: 83 RLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRY-PNAEVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 RLI CSGK+YY+L R++ + I + R+EQL PFP + + LK Y + +W QEEP N GA+ YI L + +KY+GR+ SA+ A G+ +H K+Q +++ A+ Sbjct: 792 RLIFCSGKIYYDLLRNRREKKINSIILIRIEQLYPFPEGEILKILKNYFYIKDFIWCQEEPYNQGAWFYIKDCLSNILP-----LDASLKYIGRSSSASPAVGYISIHKKQQEKIIYNAL 906
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: DHTK1_DANRE (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Danio rerio GN=dhtkd1 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 48/140 (34.29%), Postives = 80/140 (57.14%), Query Frame = 2 Query: 17 GTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKK--HSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELM 427 GT FK +I D + + ++R++ CSGK YY L + R+ + + A+ RVE+LCPFP + +Q+EL +Y NA E +WSQEEP NMG +++++PR ++ ++ V R A A G +H ++ ++ Sbjct: 786 GTSFKPIIGDSSVNP---ASVQRVLFCSGKHYYALLKHRETIPEAEKNTALVRVEELCPFPTEALQQELNKYTNAKEFIWSQEEPQNMGCWSFVSPRF-------EKQLACKLRLVSRPALPAPAVGIGTLHHQQHEAIL 915
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_BACHD (2-oxoglutarate dehydrogenase E1 component OS=Bacillus halodurans GN=odhA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 50/143 (34.97%), Postives = 83/143 (58.04%), Query Frame = 2 Query: 23 RFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASD---IAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 RFK +++ N + E + R++LCSGK+ +L + +K + D + I RVEQL PFP + +Q RYPN E+VWSQEEP NMGA+ ++ ++ +A G +++Y GR ++ A G +H +EQ ++ + + Sbjct: 807 RFKTVLEQPNL-GESHEKVERIVLCSGKIAIDLQDRIEKEADKDWDWVHIVRVEQLYPFPKEPLQEIFARYPNVKEIVWSQEEPRNMGAWPFVQSKI---RRAAPNGI--NVRYEGRTYRSSPAEGDPIIHKQEQERIVTETL 943 The following BLAST results are available for this feature:
BLAST of CX295218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295218 ID=CX295218; Name=CX295218; organism=Citrus clementina; type=EST; length=708bpback to top |