CX295218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: DHTK1_CAEEL (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Caenorhabditis elegans GN=ZK836.2 PE=2 SV=4) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 51/141 (36.17%), Postives = 80/141 (56.74%), Query Frame = 2 Query: 17 GTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASD-IAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQK 433 GT ++ +I + EH+ + I+++I SGK + + + R + D +AI RVE LCPFP +Q LK+YP A + VWSQEEP N GA++++ PR A+ +K+ GR A +AT + H KE E++ + Sbjct: 777 GTTYQNVISE--EHATSSQKIKKVIFVSGKHWINVEKARDERGLKDSVAIVRVEMLCPFPVVDLQAVLKKYPGAQDFVWSQEEPRNAGAWSFVRPRFENALGV-------RLKFAGRPELAWTATAIGEHHTKEAEEVINQ 908
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCUA (2-oxoglutarate decarboxylase OS=Mycobacterium ulcerans (strain Agy99) GN=kgd PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 + R++L SGK+YYE+ + K D+AI RVEQL P P ++ L RYPNA E W QEEP N GA+ PR + + + +K + R +A ++G +VH EQ E++ A Sbjct: 1120 VNRILLTSGKIYYEMVARKAKDKREDVAIVRVEQLAPLPRRRLRETLDRYPNAKEFFWVQEEPANQGAW----PRFGLELPELLPEKLSGVKRISRRAMSAPSSGSSKVHAVEQQEILDTA 1236
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_BUCBP (Oxoglutarate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=sucA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 45/137 (32.85%), Postives = 81/137 (59.12%), Query Frame = 2 Query: 32 RLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 R + D+ ++ D ++ ++R+ILCSGK+YY+L +R+ + +I I R+EQ+ P P + L Y + + +W QEEP N GA+ Y L + + + YVGR+ SA+ ATG+ ++H ++Q +++ A+ Sbjct: 782 RTVIDEIDNLDTKK-VQRIILCSGKIYYDLLTQRRINQQKNIVILRIEQIYPRPTKKLSAILYNYKDVHDYIWCQEEPCNQGAWLYHKSYLKKLLPKHSK-----LNYVGRSSSASPATGYMKIHKEQQKKIIYDAL 912
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_LEPIN (2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans GN=sucA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = 2 Query: 14 QGTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 QG + LI D D I +++ +GKVYY+L + + ++ ++A+ RVEQ+ PFP +Q LK + NA + VW QEEP N GA+ ++ R+ + R + Y GR S + A G ++H++EQ +L+ A Q Sbjct: 784 QGAFREILIDDSGSKPDK---IEKVVFSAGKVYYDLMKYKDENKIKNVALVRVEQIYPFPAKEIQSSLKTFKNAKQFVWCQEEPKNQGAWFFVRERIEELLPGNAR-----LVYAGRHESPSPAAGHMKLHLQEQDQLVLDAFQ 919
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_LEPIC (2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=sucA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = 2 Query: 14 QGTRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 QG + LI D D I +++ +GKVYY+L + + ++ ++A+ RVEQ+ PFP +Q LK + NA + VW QEEP N GA+ ++ R+ + R + Y GR S + A G ++H++EQ +L+ A Q Sbjct: 784 QGAFREILIDDSGSKPDK---IEKVVFSAGKVYYDLMKYKDENKIKNVALVRVEQIYPFPAKEIQSSLKTFKNAKQFVWCQEEPKNQGAWFFVRERIEELLPGNAR-----LVYAGRHESPSPAAGHMKLHLQEQDQLVLDAFQ 919
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCSS (2-oxoglutarate decarboxylase OS=Mycobacterium sp. (strain MCS) GN=kgd PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQP 445 + R++L SGK+YYEL + K S D+AI R+EQL P P + L +YPN E W QEEP N GA+ P + + IK + R +A ++G +VH EQ E++ +A P Sbjct: 1150 VTRILLTSGKIYYELVARKNKESRDDVAIVRIEQLAPLPKRRLAETLDKYPNVEEKFWVQEEPANQGAW----PTFGLTLPEMLPDHFTGIKRISRRAMSAPSSGSSKVHAVEQQEILDEAFAP 1269
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCSK (2-oxoglutarate decarboxylase OS=Mycobacterium sp. (strain KMS) GN=kgd PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQP 445 + R++L SGK+YYEL + K S D+AI R+EQL P P + L +YPN E W QEEP N GA+ P + + IK + R +A ++G +VH EQ E++ +A P Sbjct: 1150 VTRILLTSGKIYYELVARKNKESRDDVAIVRIEQLAPLPKRRLAETLDKYPNVEEKFWVQEEPANQGAW----PTFGLTLPEMLPDHFTGIKRISRRAMSAPSSGSSKVHAVEQQEILDEAFAP 1269
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCSJ (2-oxoglutarate decarboxylase OS=Mycobacterium sp. (strain JLS) GN=kgd PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQP 445 + R++L SGK+YYEL + K S D+AI R+EQL P P + L +YPN E W QEEP N GA+ P + + IK + R +A ++G +VH EQ E++ +A P Sbjct: 1145 VTRILLTSGKIYYELVARKNKESRDDVAIVRIEQLAPLPKRRLAETLDKYPNVDEKFWVQEEPANQGAW----PTFGLTLPEMLPDHFTGIKRISRRAMSAPSSGSSKVHAVEQQEILDEAFAP 1264
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_CORGL (2-oxoglutarate dehydrogenase E1 component OS=Corynebacterium glutamicum GN=odhA PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 47/142 (33.10%), Postives = 81/142 (57.04%), Query Frame = 2 Query: 20 TRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAIQ 442 T+F+ +I D N + +++++L SGK+YYEL + ++K DIAI R+E L P P++ + L YPNA EV++ Q+EP N G + + L + M ++ V R +++ATG +VH E+ +L+ +A + Sbjct: 1122 TKFQSVINDPNVADAAK--VKKVMLVSGKLYYELAKRKEKDGRDDIAIVRIEMLHPIPFNRISEALAGYPNAEEVLFVQDEPANQGPWPFYQEHLPELIP-----NMPKMRRVSRRAQSSTATGVAKVHQLEEKQLIDEAFE 1256
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCVP (2-oxoglutarate decarboxylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=kgd PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = 2 Query: 80 RRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAE-VVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 +R++L SGK+YYEL + K D+AI R+EQL P P + L YPNAE W QEEP N GA+ P L + V + IK + R +A ++G +VH EQ E++ +A Sbjct: 1126 KRILLTSGKLYYELAARKSKEGRDDVAILRLEQLAPLPKRRLAATLDEYPNAEQYFWVQEEPANQGAW----PTLGLTLPEVLPEKLAGIKRISRRAMSAPSSGSSKVHAVEQQEIIDEA 1241 The following BLAST results are available for this feature:
BLAST of CX295218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295218 ID=CX295218; Name=CX295218; organism=Citrus clementina; type=EST; length=708bpback to top |