CX295218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCPA (2-oxoglutarate decarboxylase OS=Mycobacterium paratuberculosis GN=kgd PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 + R++L SGK+YYEL + K + D+AI R+EQL P P + L RYPN E W QEEP N GA+ PR + + + +K + R +A ++G +VH EQ E++ A Sbjct: 1129 VSRVLLTSGKLYYELVARKNKDNRDDVAIVRIEQLAPLPKRRLGETLDRYPNVREYFWVQEEPANQGAW----PRFGLELPELLPDKLTGLKRISRRAMSAPSSGSSKVHAVEQQEIIDTA 1245
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCS2 (2-oxoglutarate decarboxylase OS=Mycobacterium smegmatis GN=kgd PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 45/121 (37.19%), Postives = 64/121 (52.89%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 + RL+L SGK+YYEL + K + D+AI R+EQL P P + L RYPN E W QEEP N GA+ P + + +K + R +A ++G +VH EQ E++ A Sbjct: 1109 VTRLLLTSGKIYYELAARKAKENREDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAW----PSFGLTLPEILPDHFTGLKRISRRAMSAPSSGSSKVHAVEQQEILDTA 1225
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_GEOKA (2-oxoglutarate dehydrogenase E1 component OS=Geobacillus kaustophilus GN=odhA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 49/124 (39.52%), Postives = 74/124 (59.68%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASD-IAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRL-CTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 + R++ +GK+ +L E+ K + D + I R+E+L PFP + V+ + RYPN E+VW QEEP NMGA+ Y+ PRL A + V D+ Y+GR A+ A G VH KEQ +++ A+ Sbjct: 829 VERIVFGTGKLMIDLAEQIGKMESLDWLHIVRIEELYPFPEEAVKDIIARYPNVKELVWVQEEPKNMGAWLYMEPRLRALAPEGV------DVSYIGRRRRASPAEGDPVVHRKEQERIIRCAL 946
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCTU (2-oxoglutarate decarboxylase OS=Mycobacterium tuberculosis GN=kgd PE=1 SV=4) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 45/121 (37.19%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 + R++L SGK+YYEL + K + +D+AI R+EQL P P ++ L RY N E W QEEP N GA+ PR + + + IK + R +A ++G +VH EQ E++ +A Sbjct: 1113 VSRILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYENVKEFFWVQEEPANQGAW----PRFGLELPELLPDKLAGIKRISRRAMSAPSSGSSKVHAVEQQEILDEA 1229
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCTA (2-oxoglutarate decarboxylase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=kgd PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 45/121 (37.19%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 + R++L SGK+YYEL + K + +D+AI R+EQL P P ++ L RY N E W QEEP N GA+ PR + + + IK + R +A ++G +VH EQ E++ +A Sbjct: 1113 VSRILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYENVKEFFWVQEEPANQGAW----PRFGLELPELLPDKLAGIKRISRRAMSAPSSGSSKVHAVEQQEILDEA 1229
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCBP (2-oxoglutarate decarboxylase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=kgd PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 45/121 (37.19%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 + R++L SGK+YYEL + K + +D+AI R+EQL P P ++ L RY N E W QEEP N GA+ PR + + + IK + R +A ++G +VH EQ E++ +A Sbjct: 1113 VSRILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYENVKEFFWVQEEPANQGAW----PRFGLELPELLPDKLAGIKRISRRAMSAPSSGSSKVHAVEQQEILDEA 1229
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCBO (2-oxoglutarate decarboxylase OS=Mycobacterium bovis GN=kgd PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 45/121 (37.19%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 77 IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 + R++L SGK+YYEL + K + +D+AI R+EQL P P ++ L RY N E W QEEP N GA+ PR + + + IK + R +A ++G +VH EQ E++ +A Sbjct: 1113 VSRILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYENVKEFFWVQEEPANQGAW----PRFGLELPELLPDKLAGIKRISRRAMSAPSSGSSKVHAVEQQEILDEA 1229
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_BACSK (2-oxoglutarate dehydrogenase E1 component OS=Bacillus clausii (strain KSM-K16) GN=odhA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 2 Query: 77 IRRLILCSGKVYYEL--YEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNAEVV-WSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 ++R+ILCSGK+ EL Y + S + I RVE+L PFP ++ LK +PN E V W QEEP NMGA+T++ PR+ + + G + Y+GR ++ A G H EQ ++ +++ Sbjct: 821 VKRIILCSGKLAIELQDYVNKNDEDWSWVHIIRVEELYPFPRRAIRERLKEFPNLEEVKWVQEEPKNMGAWTFMEPRI---REILPSGV--PLSYIGRTYRSSPAEGVSNAHKVEQKRIVTESL 939
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: ODO1_BACA2 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus amyloliquefaciens (strain FZB42) GN=odhA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 51/144 (35.42%), Postives = 79/144 (54.86%), Query Frame = 2 Query: 20 TRFKRLIKDQNEHSDLEEGIRRLILCSGKVYYELYEERKKHSASD--IAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLC-TAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKAI 439 +RFK + +Q+ S E + R++L SGKV ++ + K + I R+EQL PFP + + PN E+VW QEEP NMGA++YI+P L A K V +++Y+GR ++ A G VH KEQ ++ ++ Sbjct: 804 SRFKP-VYEQSGLSHAYEKVTRVVLSSGKVSIDISDHFNKMEGDKDWLHIARIEQLYPFPAKDTKELFAKLPNLQEIVWVQEEPQNMGAWSYISPYLSEIAPKGV------NVQYIGRRRRSSPAEGDPTVHKKEQERIVSDSL 940
BLAST of CX295218 vs. ExPASy Swiss-Prot
Match: KGD_MYCLE (2-oxoglutarate decarboxylase OS=Mycobacterium leprae GN=kgd PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 45/141 (31.91%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 23 RFKRLIKDQNEHSDLEEG--IRRLILCSGKVYYELYEERKKHSASDIAICRVEQLCPFPYDLVQRELKRYPNA-EVVWSQEEPMNMGAYTYIAPRLCTAMKAVDRGTMEDIKYVGRAPSAASATGFYQVHVKEQSELMQKA 436 +F+ ++++ +++ + R++L GK+YYEL + K + D+AI R+EQL P P + L RY NA E W QEEP N GA+ L + + IK + R +A ++G +VH EQ E++ A Sbjct: 1101 KFRSVLEEPTYEDSIDDRSKVTRVLLTCGKLYYELAARKIKDNRDDVAIVRIEQLAPLPRRRLGETLDRYENAKEFFWVQEEPANQGAWPRFGLELPELLP-----RLTGIKRISRRAMSAPSSGSSKVHAVEQQEILDTA 1236 The following BLAST results are available for this feature:
BLAST of CX295218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295218 ID=CX295218; Name=CX295218; organism=Citrus clementina; type=EST; length=708bpback to top |