CX295311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295311 vs. ExPASy Swiss-Prot
Match: ATPH_EUGGR (ATP synthase subunit c, chloroplastic OS=Euglena gracilis GN=atpH PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22 Identity = 56/81 (69.14%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 422 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 664 MNP+I AASVI AGLA+GL +I +ARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALA++FANPFV Sbjct: 1 MNPIICAASVIGAGLAIGLGAIGPGIGQGTASGKAIEGLARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALAIIFANPFV 81
BLAST of CX295311 vs. ExPASy Swiss-Prot
Match: ATPH_CHLVU (ATP synthase subunit c, chloroplastic OS=Chlorella vulgaris GN=atpH PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22 Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 422 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPF 661 MNP+++AASVIAAGLAVGLA+I IARQPEAEGKIRG LLLS AFME+LTIYGLVVALALLFANPF Sbjct: 1 MNPIVAAASVIAAGLAVGLAAIGPGMGQGTAAGYAVEGIARQPEAEGKIRGALLLSFAFMESLTIYGLVVALALLFANPF 80
BLAST of CX295311 vs. ExPASy Swiss-Prot
Match: ATPH_OLTVI (ATP synthase subunit c, chloroplastic OS=Oltmannsiellopsis viridis GN=atpH PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22 Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 422 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPF 661 MNPLI+AASV+AAGL+VGLA+I IARQPEAEGKIRG LLLS AFME+LTIYGLVVALALLFANPF Sbjct: 1 MNPLIAAASVVAAGLSVGLAAIGPGMGQGTAAGYAVEGIARQPEAEGKIRGALLLSFAFMESLTIYGLVVALALLFANPF 80
BLAST of CX295311 vs. ExPASy Swiss-Prot
Match: ATPH_STIHE (ATP synthase subunit c, chloroplastic OS=Stigeoclonium helveticum GN=atpH PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22 Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 422 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPF 661 MNP+I+AASVIAAGL+VGLA+I IARQPEAEGKIRG LLLS AFME+LTIYGLVVALALLFANPF Sbjct: 1 MNPIIAAASVIAAGLSVGLAAIGPGMGQGTAAGYAVEGIARQPEAEGKIRGALLLSFAFMESLTIYGLVVALALLFANPF 80
BLAST of CX295311 vs. ExPASy Swiss-Prot
Match: ATPH_BIGNA (ATP synthase subunit c, chloroplastic OS=Bigelowiella natans GN=atpH PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 56/80 (70.00%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 422 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPF 661 MNPLISA+SV+AAGLA+GLA+I IARQPEAEGKIRG LLLS AFME+LTIYGLVVAL LLFANPF Sbjct: 1 MNPLISASSVVAAGLAIGLAAIGPGIGQGTAAGYAVEGIARQPEAEGKIRGALLLSFAFMESLTIYGLVVALVLLFANPF 80
BLAST of CX295311 vs. ExPASy Swiss-Prot
Match: ATPL_THEEB (ATP synthase subunit c OS=Thermosynechococcus elongatus (strain BP-1) GN=atpE PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22 Identity = 55/80 (68.75%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 422 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPF 661 MNPLI++ASV+AA LA+GLAS+ IARQPEAEGKIRGTLLLSLAFME+LTIYGLV+AL LLFANPF Sbjct: 1 MNPLIASASVLAAALAIGLASLGPGLAQGNASGQALEGIARQPEAEGKIRGTLLLSLAFMESLTIYGLVIALVLLFANPF 80
BLAST of CX295311 vs. ExPASy Swiss-Prot
Match: ATPH_THAPS (ATP synthase subunit c, chloroplastic OS=Thalassiosira pseudonana GN=atpH PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22 Identity = 58/80 (72.50%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 422 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPF 661 M+ +ISAASVIAAGLA+GLA+I IARQPEAE KIRGTLLLSLAFMEALTIYGLVVALALLFANPF Sbjct: 1 MDSIISAASVIAAGLAIGLAAIGPGIGQGNAAGQAVEGIARQPEAENKIRGTLLLSLAFMEALTIYGLVVALALLFANPF 80
BLAST of CX295311 vs. ExPASy Swiss-Prot
Match: ATPH_SCEOB (ATP synthase subunit c, chloroplastic OS=Scenedesmus obliquus GN=atpH PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22 Identity = 55/80 (68.75%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 422 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPF 661 MNP+++AASV++AGLAVGLA+I IARQPEAEGKIRG LLLS AFME+LTIYGLVVALALLFANPF Sbjct: 1 MNPIVAAASVVSAGLAVGLAAIGPGMGQGTAAGYAVEGIARQPEAEGKIRGALLLSFAFMESLTIYGLVVALALLFANPF 80
BLAST of CX295311 vs. ExPASy Swiss-Prot
Match: ATPL_CYAP8 (ATP synthase subunit c OS=Cyanothece sp. (strain PCC 8801) GN=atpE PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21 Identity = 56/80 (70.00%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 422 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPF 661 MNP ++AASVIAA LAVGLA+I IARQPEAEGKIRGTLLLSLAFME+LTIYGLV+AL LLFANPF Sbjct: 1 MNPTVAAASVIAAALAVGLAAIGPGFGQGNASGEAVSGIARQPEAEGKIRGTLLLSLAFMESLTIYGLVIALVLLFANPF 80
BLAST of CX295311 vs. ExPASy Swiss-Prot
Match: ATPH_PORYE (ATP synthase subunit c, chloroplastic OS=Porphyra yezoensis GN=atpH PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 422 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV 664 M+ ++SAASVIAAGLAVGLA+I IARQPE EGKIRGTLLLSLAFME+LTIYGLVVAL+LLFANP+V Sbjct: 1 MDSIVSAASVIAAGLAVGLAAIGPGIGQGSAAANAVEGIARQPEVEGKIRGTLLLSLAFMESLTIYGLVVALSLLFANPYV 81 The following BLAST results are available for this feature:
BLAST of CX295311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295311 ID=CX295311; Name=CX295311; organism=Citrus clementina; type=EST; length=702bpback to top |