CX295338

Overview
NameCX295338
Unique NameCX295338
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295338 vs. ExPASy Swiss-Prot
Match: BGAL_BRAOL (Beta-galactosidase OS=Brassica oleracea PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 46/152 (30.26%), Postives = 75/152 (49.34%), Query Frame = 3 
Query:    3 VPRSWLQ-ASNNLLVIFEETGGNPFEISVKLRSTRIVCEQVSESHYPPVRKWSNSYSVDGKLSINKMAPEMHLHCQDGYIISSIEFASYGTPQGRCQKFSRGNCH-APMSLSVVSEACQGKSSCSIGITNAVFGGD-PCRGIVKTLAVEARC 449
            VPRS+L    +N + +FEE GG+P  +  K   T  VC +  E +                        ++ L C +  I S+++FAS+G P G+C  F+ G+C  A  ++ VV++ C GK +C++ +++  FG +  C    K L VE  C
Sbjct:  702 VPRSFLNDKGHNTITLFEEMGGDPSMVKFKTVVTGRVCAKAHEHN------------------------KVELSCNNRPI-SAVKFASFGNPSGQCGSFAAGSCEGAKDAVKVVAKECVGKLNCTMNVSSHKFGSNLDCGDSPKRLFVEVEC 828
The following BLAST results are available for this feature:
BLAST of CX295338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
BGAL_BRAOL2.806e-1130.26Beta-galactosidase OS=Brassica oleracea PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05071B08SK PhIFruit1 Citrus clementina cDNA clone C05071B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295338 ID=CX295338; Name=CX295338; organism=Citrus clementina; type=EST; length=691bp
GGGTGCCACGGTCATGGTTGCAAGCATCAAATAATTTACTCGTCATCTTT
GAGGAAACAGGAGGCAATCCGTTTGAGATTTCAGTCAAGTTGCGTTCAAC
TCGAATTGTCTGTGAACAAGTTTCAGAGTCCCACTACCCACCTGTTAGGA
AGTGGTCCAATTCATATTCTGTTGATGGAAAATTGTCGATAAATAAGATG
GCACCAGAAATGCATTTGCATTGTCAAGATGGATATATTATCTCTTCCAT
AGAATTTGCTAGCTATGGTACCCCTCAGGGTCGCTGCCAGAAATTTTCAA
GGGGCAACTGCCATGCGCCCATGTCATTATCCGTGGTGTCTGAGGCTTGC
CAAGGTAAAAGTAGCTGTTCCATAGGAATTACAAATGCTGTGTTTGGAGG
TGACCCATGCCGCGGCATTGTGAAGACATTAGCTGTTGAGGCAAGATGCA
TCCCCTCATCGAATACTGGTTTCTCTCAGATTTAAGTGACAAATTGCCGC
AAGATGTTCGCGGTTGATACCCTAAATCTATTACAAAAAGCAAACTGTTT
TCATTGCATTCTGTCCGCATTTCAGGCCGACAGGTCGCATGGGAAATCCA
GTTGTATAATTTATACATGTTGCAGCATCTGCTGTTGTATTCTACGGGGT
ACATAAACCTGTTATAACATTTGCACATGCCCCTTGCCCAA
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