CX295350

Overview
NameCX295350
Unique NameCX295350
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.348e-50
Identity = 100/232 (43.10%), Postives = 152/232 (65.52%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEH--LKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+ S+T L+LAE+  E GLP G+ N++TG G + G  L  HP + K++FTG  A+G ++MA AA   +K V++ELGGKSP+I+F DVDLDKA +  +   F+++GQ+C+  +R+ V +++ A F +++V+ +K I I DP +E    GP+VS    + V+++I + K EGAT+L GG       L  G +V PTV T     MQI REE+FGPV+ + ++ +E+E I  A
Sbjct:  177 PSEVTSLTALKLAEIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADVDLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERVNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGCSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRA 408          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_RHILO (Betaine aldehyde dehydrogenase OS=Rhizobium loti GN=betB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.348e-50
Identity = 103/231 (44.59%), Postives = 149/231 (64.50%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARP--EHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE   ++ L LAE+  E GLP G+ N+V G G + GA LV H  V K++ TGS  TG ++++ A   +K  ++ELGGKSP+IVF+D D++ A+   + G F++ GQICS  +R+ V   I   F+ER+V+  K I+I +PL+   ++GP+VS  Q+EKV+ +I   K +GA + CGG  P  +    GFFVEPTV T +  +M+I REE+FGPV+ V  F  EDE I+ A
Sbjct:  176 PSENTPLSALALAEIYSEAGLPDGLFNVVQGYG-DVGAGLVGHDVVAKVSVTGSVPTGRKVLSLAGSKMKHATMELGGKSPLIVFDDADIENAIGGAMLGNFYSTGQICSNGTRVFVQSGIHDRFVERLVERTKKIRIGNPLDPETQMGPLVSKAQHEKVVGYIGIGKQDGAVLACGGNVPSLQGFDGGFFVEPTVFTGVTDTMRIAREEIFGPVMSVLKFDGEDEVIDRA 405          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_PSEPG (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.348e-50
Identity = 97/232 (41.81%), Postives = 148/232 (63.79%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGAR--PEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+ S+T L+LAE+  E GLP G+ N++TG G E G  L  HP ++K++FTG   TG ++MA+A+   +K V++ELGGKSP+I+  D DLDKA +  +   F+++GQ+C+  +R+ +   + A F  ++ + +  I++ +P +E    GP+VS    E VL +I+  K EGA +LCGG R       KG FV PTV TD +  M I +EE+FGPV+ + ++ TE+E I  A
Sbjct:  177 PSEVTSLTTLKLAEIYTEAGLPNGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTTTGKKVMASASSSSLKEVTMELGGKSPLIICADADLDKAADIAMMANFYSSGQVCTNGTRVFIPAEMKAAFEAKIAERVARIRVGNPEDENTNFGPLVSFAHMENVLSYIAKGKEEGARVLCGGERLTEGEFAKGAFVAPTVFTDCSDDMTIVKEEIFGPVMSILSYETEEEVIRRA 408          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.348e-50
Identity = 98/232 (42.24%), Postives = 150/232 (64.66%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEH--LKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+  +T L+LAE+  E G+P G+ N++TG G E G  L  HP ++KI+FTG  +TG ++MA+A+   +K V++ELGGKSP+I+F D DLD+A +  +   F+++GQ+C+  +R+ +H S  A F  ++++ ++ I++ DP +E    GP+VS    E VL +I + K++ A +LCGG R       KG +V PTV TD    M I REE+FGPV+ +  +  EDEAI  A
Sbjct:  177 PSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRA 408          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.348e-50
Identity = 98/232 (42.24%), Postives = 150/232 (64.66%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEH--LKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+  +T L+LAE+  E G+P G+ N++TG G E G  L  HP ++KI+FTG  +TG ++MA+A+   +K V++ELGGKSP+I+F D DLD+A +  +   F+++GQ+C+  +R+ +H S  A F  ++++ ++ I++ DP +E    GP+VS    E VL +I + K++ A +LCGG R       KG +V PTV TD    M I REE+FGPV+ +  +  EDEAI  A
Sbjct:  177 PSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRA 408          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 2.348e-50
Identity = 105/230 (45.65%), Postives = 144/230 (62.61%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            P+E   +T L +A + +E G PPG++NIV G GP AGA + SH  VDK+AFTGS   G  I  AA    +K V+LELGGKSP IVF D DLD AVE+   G F+  GQ C A SR+ V ES+  EF+ + V+  K   + +PL +G   GP +   Q++K+L  I + K EGA + CGG R  +  KGFFV+PTV +++   M+I +EE+FGPV  +  F + D+ I+ A
Sbjct:  194 PAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGN--KGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDDVIKRA 421          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.067e-50
Identity = 97/229 (42.36%), Postives = 146/229 (63.76%), Query Frame = 3
Query:    6 SELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKW-IKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            +E   ++ L  A +  E G P G++NI++GLG  AG+ +  HP +DKIAFTGS   G+ +   AA  +K V+LE GGKSP +VFED DLD+AV+W   G  + +GQIC++ SR+ V +S+  +F+E   K  I++  +  P ++   +GPVV+  QY ++  +I   K EGA ++ G   P  LK+G+F+ PT+  D + +M I +EE+FGPV+ +  F TEDEAIE A
Sbjct:  190 AETTPLSLLYFATLVEEAGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIVQQLAASNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLVLGD-EPLPLKQGYFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKA 417          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_RHOS5 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=betB PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.067e-50
Identity = 105/229 (45.85%), Postives = 148/229 (64.63%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+  +  L+LAE+  E GLPPG+ N+V G G   GA LVS   V K++ TGS  TG R+ AAAA  V+ V++ELGGKSP+IVF+D DL+ A+   + G F+++GQICS  +R+ V + I   FL R+ +    I++ DPL+   ++GP+VS  Q EKVL +I  A++EG  ++CGG     +  G +V+PTV  D+   M + REEVFGPV+ V  F TE+E I  A
Sbjct:  176 PSEVTPLGALKLAEILIEAGLPPGLFNVVQGRGA-VGAALVSDSRVAKVSLTGSVPTGRRVYAAAAEGVRHVTMELGGKSPLIVFDDADLESAIGAAMLGNFYSSGQICSNGTRVFVQKGIKEAFLARLAERADAIQMGDPLDPEVQMGPLVSPAQLEKVLSYIEKARAEGGRLVCGG--EASVSPGCYVQPTVFADVTDGMTLAREEVFGPVMAVLDFETEEEVIARA 401          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.067e-50
Identity = 97/228 (42.54%), Postives = 151/228 (66.23%), Query Frame = 3
Query:    6 SELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIEL 686
            +E   ++ L  A++ +E G P G++N+++G G  AGA + SH  +DK+AFTGS   G  I+ AAA   +K V+LELGGKSP IVF+D D+D A+ W  FG F+ +GQ C A SR+LV E I  +F+ R  +  +  K+ +P E+    GP VS  Q+++++++I++ K  GAT+  GG R  H  +G+F++PTV TD+ + M+I +EE+FGPV+ ++ F  E EAI++
Sbjct:  190 AEQTPLSALYAAKLIKEAGFPAGVINVISGFGRTAGAAISSHMDIDKVAFTGSTLVGRTILQAAAKSNLKKVTLELGGKSPNIVFDDADIDNAISWANFGIFFNHGQCCCAGSRILVQEGIYDKFVARFKERAQKNKVGNPFEQDTFQGPQVSQLQFDRIMEYINHGKKAGATVATGGDR--HGNEGYFIQPTVFTDVTSDMKIAQEEIFGPVVTIQKFKDEAEAIKI 415          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.067e-50
Identity = 106/230 (46.09%), Postives = 142/230 (61.74%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            P+E   +T L +A + +E G PPG++NIV G GP AG  + SH  +DK++FTGS   G  I  AA    +K V+LELGGKSP IVF D DLD AVE+   G F+  GQIC A SRL V ESI  EF+ R V+  K   + +PL  G   GP +   Q+ K+L  I + K EGA + CGG R  +  KGFFV+PTV +++   M+I +EE+FGPV  +  F + D+ I+ A
Sbjct:  194 PAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGGAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKLECGGGRWGN--KGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSMDDVIKRA 421          
The following BLAST results are available for this feature:
BLAST of CX295350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_YERPY2.348e-5043.10Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_RHILO2.348e-5044.59Betaine aldehyde dehydrogenase OS=Rhizobium loti G... [more]
BETB_PSEPG2.348e-5041.81Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_PSEAE2.348e-5042.24Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA82.348e-5042.24Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
AL1A1_RAT2.348e-5045.65Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
YLX7_SCHPO3.067e-5042.36Putative aldehyde dehydrogenase-like protein C922.... [more]
BETB_RHOS53.067e-5045.85Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
ALDH_EMENI3.067e-5042.54Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
AL1A7_MOUSE3.067e-5046.09Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionC05071C08SK PhIFruit1 Citrus clementina cDNA clone C05071C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295350 ID=CX295350; Name=CX295350; organism=Citrus clementina; type=EST; length=691bp
AGCCATCCGAATTGGCATCTGTGACCTGTTTGGAGCTTGCTGAAGTGTGT
AGAGAGGTGGGTCTTCCTCCCGGCATTCTTAATATTGTCACCGGATTGGG
TCCTGAAGCTGGGGCTCCTTTGGTATCCCATCCCCATGTCGACAAGATTG
CATTTACTGGAAGCAATGCAACAGGGATCAGGATAATGGCTGCTGCAGCT
CCGATGGTCAAGCCTGTTTCTTTGGAGCTGGGAGGAAAAAGTCCAATCAT
TGTGTTTGAGGATGTTGATCTAGATAAAGCGGTTGAGTGGACCATCTTTG
GTTGCTTTTGGACAAATGGTCAGATCTGTAGTGCAACATCTCGCCTTCTT
GTGCACGAAAGCATTGCAGCAGAATTTTTAGAGAGGATGGTGAAGTGGAT
CAAAAACATTAAGATTTCGGATCCACTGGAAGAAGGTTGCAGACTTGGTC
CTGTTGTTAGCGGAGGGCAGTATGAGAAAGTTTTGAAGTTCATTTCAAAT
GCCAAGAGCGAAGGTGCAACCATTTTGTGTGGTGGTGCTCGTCCTGAGCA
TCTGAAGAAGGGATTCTTTGTAGAACCAACCGTCATAACTGACATAGCGA
CATCAATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTTTGTGTGTC
AAGGCATTTTCCACAGAAGATGAAGCCATTGAATTGGCAAA
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