CX295350

Overview
NameCX295350
Unique NameCX295350
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_YERPE (Betaine aldehyde dehydrogenase OS=Yersinia pestis GN=betB PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.554e-49
Identity = 98/232 (42.24%), Postives = 150/232 (64.66%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGG--ARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+ S+T L+LA +  E GLP G+ N++TG G + G  L  HP + K++FTG  A+G ++MA AA   +K V++ELGGKSP+I+F D DLDKA +  +   F+++GQ+C+  +R+ V +++ A F +++V+ +K I I DP +E    GP+VS    + V+++I + K EGAT+L GG       L  G +V PTV T     MQI REE+FGPV+ + ++ +E+E I  A
Sbjct:  177 PSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRA 408          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_YERPB (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=betB PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.554e-49
Identity = 98/232 (42.24%), Postives = 150/232 (64.66%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGG--ARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+ S+T L+LA +  E GLP G+ N++TG G + G  L  HP + K++FTG  A+G ++MA AA   +K V++ELGGKSP+I+F D DLDKA +  +   F+++GQ+C+  +R+ V +++ A F +++V+ +K I I DP +E    GP+VS    + V+++I + K EGAT+L GG       L  G +V PTV T     MQI REE+FGPV+ + ++ +E+E I  A
Sbjct:  177 PSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRA 408          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_YERPA (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=betB PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.554e-49
Identity = 98/232 (42.24%), Postives = 150/232 (64.66%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGG--ARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+ S+T L+LA +  E GLP G+ N++TG G + G  L  HP + K++FTG  A+G ++MA AA   +K V++ELGGKSP+I+F D DLDKA +  +   F+++GQ+C+  +R+ V +++ A F +++V+ +K I I DP +E    GP+VS    + V+++I + K EGAT+L GG       L  G +V PTV T     MQI REE+FGPV+ + ++ +E+E I  A
Sbjct:  177 PSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRA 408          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_XANAC (Betaine aldehyde dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=betB PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.554e-49
Identity = 97/232 (41.81%), Postives = 147/232 (63.36%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEH--LKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+  +T L+LAE+  E GLP G+ N++ G G   G  L  HP ++KI+FTG  ATG ++MA+A+   +K V++ELGGKSP+IV  D DLD A +  +   F+++GQ+C+  +R+ V  ++   F  R++  ++ I I DPL+E    GP+ S    ++VL+ I   K+EGA +LCGG R +   L +G++V PT+ +D    M I REE+FGPVL +  +  EDEA+  A
Sbjct:  177 PSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLKEVTMELGGKSPLIVCADADLDVAADIAMMANFYSSGQVCTNGTRVFVPRALRHAFEARLLARVQRIHIGDPLDERTTFGPLASAAHMQRVLEHIEQGKAEGARLLCGGERLQDGALVQGYYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAVTRA 408          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_BURCJ (Betaine aldehyde dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betB PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.554e-49
Identity = 98/232 (42.24%), Postives = 148/232 (63.79%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGAR--PEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+  +T L+LAE+  E G+P G+ N+V G G   GA L  HP + K++FTG   TG ++M+ A A  +K V++ELGGKSP+IVF+D DLD+A +  +   F+++GQ+C+  +R+ +H S+   F +++++ +K I++  P +     GP+VS  Q +KVL FI + K+EGA +L GG R    H   G +V PTV  D    M+I REE+FGPV+ +  F +EDE I  A
Sbjct:  177 PSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFMHRSVKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESEDEVIARA 407          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: AL8A1_HUMAN (Aldehyde dehydrogenase family 8 member A1 OS=Homo sapiens GN=ALDH8A1 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.554e-49
Identity = 104/234 (44.44%), Postives = 141/234 (60.26%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGG-----ARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSEL SVT   L ++  + G+PPG++NIV G GP  G  LVSHP V  I+FTGS  T  RI   +AP  K +SLELGGK+P I+FED +LD+ +  T+   F   G+IC  TSR+ V +SI +EFL+R V+  +  K+  P +    +G ++S    EKV  ++  A +EGA I CG      + P   + G+F+ PTVITDI        EE+FGPV CV  F +E+E IE A
Sbjct:  179 PSELTSVTAWMLCKLLDKAGVPPGVVNIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSAPHCKKLSLELGGKNPAIIFEDANLDECIPATVRSSFANQGEICLCTSRIFVQKSIYSEFLKRFVEATRKWKVGIPSDPLVSIGALISKAHLEKVRSYVKRALAEGAQIWCGEGVDKLSLPARNQAGYFMLPTVITDIKDESCCMTEEIFGPVTCVVPFDSEEEVIERA 412          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.866e-49
Identity = 99/232 (42.67%), Postives = 146/232 (62.93%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEH--LKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+  +T L+LAE+  E GLP G+ N++ G G   G  L  HP ++KI+FTG  ATG ++MA+A+   +K V++ELGGKSP+IV  D DLD A +  +   F+++GQ+C+  +R+ V  ++   F  R++  ++ I I DPL+E    GP+VS    ++VL+ I   K+EGA +LCGG R     L +G +V PT+ +D    M I REE+FGPVL +  +  EDEAI  A
Sbjct:  177 PSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLCGGERLRDGALAQGCYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRA 408          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.866e-49
Identity = 99/232 (42.67%), Postives = 146/232 (62.93%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEH--LKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+  +T L+LAE+  E GLP G+ N++ G G   G  L  HP ++KI+FTG  ATG ++MA+A+   +K V++ELGGKSP+IV  D DLD A +  +   F+++GQ+C+  +R+ V  ++   F  R++  ++ I I DPL+E    GP+VS    ++VL+ I   K+EGA +LCGG R     L +G +V PT+ +D    M I REE+FGPVL +  +  EDEAI  A
Sbjct:  177 PSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLCGGERLRDGALAQGCYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRA 408          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: AL8A1_MOUSE (Aldehyde dehydrogenase family 8 member A1 OS=Mus musculus GN=Aldh8a1 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.866e-49
Identity = 101/234 (43.16%), Postives = 141/234 (60.26%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGG-----ARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            PSE+ SVT     ++  + G+PPG++NIV G GP  G  LVSHP V  I+FTGS  T  RI   +AP  K +SLELGGK+P I+FED +L++ +  T+   F   G+IC  TSR+ V  SI +EFL+R V+  +  K+  P +    +G ++S    EKV  ++  A++EGA ILCG      + P   + G+F+ PTVITDI    +   EE+FGPV CV  F +E+E I  A
Sbjct:  179 PSEMTSVTAWMFCKLLDKAGVPPGVINIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSAPHCKKLSLELGGKNPAIIFEDANLEECIPATVRSSFANQGEICLCTSRIFVQRSIYSEFLKRFVEATRKWKVGVPSDPSANMGALISKAHLEKVRSYVLKAQTEGARILCGEGVDQLSLPLRNQAGYFMLPTVITDIKDESRCMTEEIFGPVTCVVPFDSEEEVITRA 412          
BLAST of CX295350 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.866e-49
Identity = 104/230 (45.22%), Postives = 139/230 (60.43%), Query Frame = 3
Query:    3 PSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWTIFGCFWTNGQICSATSRLLVHESIAAEFLERMVKWIKNIKISDPLEEGCRLGPVVSGGQYEKVLKFISNAKSEGATILCGGARPEHLKKGFFVEPTVITDIATSMQIWREEVFGPVLCVKAFSTEDEAIELA 689
            P+E   +T L +A + +E G PPG++NIV G GP AGA + SH  +DK+AFTGS   G  I  AA    +K V+LELGGKSP IVF D DLD AVE+   G F+  GQ C A SRL V ESI  EF+ R V+  K   + +PL      GP +   QY K+L  I + K EGA + CGG       KG+F++PTV +++   M+I +EE+FGPV  +  F + D+ I+ A
Sbjct:  189 PAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLAPEVNQGPQIDKEQYNKILDLIESGKKEGAKLECGGG--PWGNKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRA 416          
The following BLAST results are available for this feature:
BLAST of CX295350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_YERPE7.554e-4942.24Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPB7.554e-4942.24Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPA7.554e-4942.24Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_XANAC7.554e-4941.81Betaine aldehyde dehydrogenase OS=Xanthomonas axon... [more]
BETB_BURCJ7.554e-4942.24Betaine aldehyde dehydrogenase OS=Burkholderia cep... [more]
AL8A1_HUMAN7.554e-4944.44Aldehyde dehydrogenase family 8 member A1 OS=Homo ... [more]
BETB_XANCB9.866e-4942.67Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC89.866e-4942.67Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
AL8A1_MOUSE9.866e-4943.16Aldehyde dehydrogenase family 8 member A1 OS=Mus m... [more]
AL1A1_RABIT9.866e-4945.22Retinal dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]

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Properties
Property NameValue
Genbank descriptionC05071C08SK PhIFruit1 Citrus clementina cDNA clone C05071C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295350 ID=CX295350; Name=CX295350; organism=Citrus clementina; type=EST; length=691bp
AGCCATCCGAATTGGCATCTGTGACCTGTTTGGAGCTTGCTGAAGTGTGT
AGAGAGGTGGGTCTTCCTCCCGGCATTCTTAATATTGTCACCGGATTGGG
TCCTGAAGCTGGGGCTCCTTTGGTATCCCATCCCCATGTCGACAAGATTG
CATTTACTGGAAGCAATGCAACAGGGATCAGGATAATGGCTGCTGCAGCT
CCGATGGTCAAGCCTGTTTCTTTGGAGCTGGGAGGAAAAAGTCCAATCAT
TGTGTTTGAGGATGTTGATCTAGATAAAGCGGTTGAGTGGACCATCTTTG
GTTGCTTTTGGACAAATGGTCAGATCTGTAGTGCAACATCTCGCCTTCTT
GTGCACGAAAGCATTGCAGCAGAATTTTTAGAGAGGATGGTGAAGTGGAT
CAAAAACATTAAGATTTCGGATCCACTGGAAGAAGGTTGCAGACTTGGTC
CTGTTGTTAGCGGAGGGCAGTATGAGAAAGTTTTGAAGTTCATTTCAAAT
GCCAAGAGCGAAGGTGCAACCATTTTGTGTGGTGGTGCTCGTCCTGAGCA
TCTGAAGAAGGGATTCTTTGTAGAACCAACCGTCATAACTGACATAGCGA
CATCAATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTTTGTGTGTC
AAGGCATTTTCCACAGAAGATGAAGCCATTGAATTGGCAAA
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