CX295421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PEX6_YARLI (Peroxisomal biogenesis factor 6 OS=Yarrowia lipolytica GN=PEX6 PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11 Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 6 CRIRHEEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGFDSRGD--VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR-IFQIHTSRMTLADDVNLEEF-VMTKDEFSGADIKAICTEAGLLAL 389 C + +E+D+V +R + SGG + R + +LL +LDG + G V V+ ATNR + LD ALLRPGR D+ + + D +++ I + T + LA DV+LE F+GAD A+C++A L A+ Sbjct: 813 CVVFFDELDSVAPQRGNQGDSGGVMD--RIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEAISKRCPFTFTGADFYALCSDAMLNAM 943
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PEX6_PENCH (Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11 Identity = 51/145 (35.17%), Postives = 81/145 (55.86%), Query Frame = 3 Query: 6 CRIRHEEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGF----DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDI-KTRRRIFQIHTSRMTLADDVNL----EEFVMTKDEFSGADIKAICTEAGLLALRERRMKV 410 C + +E+D+V KR + SGG + R + +LL +LDG ++ G V VI ATNR + LD ALLRPGR D+ + + D + + I + T + L DV+L E+ +T ++GAD+ A+C++A L A+ + V Sbjct: 1124 CVVFFDELDSVAPKRGNQGDSGGVMD--RIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAEQLPLT---YTGADLYALCSDAMLKAITRKATAV 1263
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11 Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 21 EEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 398 +EID++ ++R S +R ELL Q+DG D V V+ ATN +D AL R R++++I PLP K R + +I+ + L D+ LE+ + +SGADI +C +A L+A+R R Sbjct: 307 DEIDSICSRR--GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRR 435
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11 Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 21 EEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 398 +EID++ ++R S +R ELL Q+DG D V V+ ATN +D AL R R++++I PLP K R + +I+ + L D+ LE+ + +SGADI +C +A L+A+R R Sbjct: 307 DEIDSICSRR--GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRR 435
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11 Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 21 EEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 398 +EID++ ++R S +R ELL Q+DG D V V+ ATN +D AL R R++++I PLP K R + +I+ + L D+ LE+ + +SGADI +C +A L+A+R R Sbjct: 307 DEIDSICSRR--GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRR 435 The following BLAST results are available for this feature:
BLAST of CX295421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 295
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295421 ID=CX295421; Name=CX295421; organism=Citrus clementina; type=EST; length=645bpback to top |