CX295430

Overview
NameCX295430
Unique NameCX295430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295430 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11
Identity = 39/142 (27.46%), Postives = 74/142 (52.11%), Query Frame = 2 
Query:   47 KAHGKTQFSIYQGRWNVMLRDMEREIIPMARHWGMALAPWDAIGGGHFQTKTQMEERKKNNEGVRSIMAPEQTEQEAKVSEALEKVAKAHGVESITAVALAYVMAKTPNVFPLVGGRKVEHLHQNIKSLEIKLSSKDIEDLE 472
            K HG  QF   Q  +N++ R+ ERE++P+    G+A+ PW  +  G           +  ++ V   +  E  E +A+++E L  V++  G  +   VALA++++K     P++G  + E L + + +++I L  + I +LE
Sbjct:  172 KQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGA-TRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELE 312
The following BLAST results are available for this feature:
BLAST of CX295430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
YAJO_ECOLI5.136e-1127.46Uncharacterized oxidoreductase yajO OS=Escherichia... [more]

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Properties
Property NameValue
Genbank descriptionC05072B05SK PhIFruit1 Citrus clementina cDNA clone C05072B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295430 ID=CX295430; Name=CX295430; organism=Citrus clementina; type=EST; length=719bp
GAGGCGATCTCCTGCTTACATCGTCTCCGCTGCCAACGCTTACGCAAAAG
CCCACGGCAAGACACAGTTCTCCATCTACCAGGGACGATGGAACGTGATG
TTGCGTGACATGGAGCGTGAAATCATCCCCATGGCACGTCACTGGGGCAT
GGCTTTGGCTCCATGGGACGCCATCGGTGGTGGTCACTTCCAGACCAAGA
CTCAAATGGAGGAGCGCAAGAAGAACAACGAGGGTGTTCGTAGCATCATG
GCTCCAGAGCAGACTGAGCAAGAAGCCAAGGTTTCAGAGGCTTTGGAGAA
GGTTGCCAAAGCGCATGGTGTCGAGTCCATCACTGCTGTCGCTCTTGCAT
ACGTGATGGCCAAGACTCCAAACGTCTTCCCATTGGTCGGCGGCAGGAAG
GTCGAGCACCTCCATCAGAACATCAAGTCTCTGGAAATCAAGCTTTCCTC
CAAGGACATTGAGGACCTCGAGGCTGCGACATCGTTCGAGATCGGCTTCC
CCAAGAATTTCATCGGAGAGGATCCCCATGTCTCTGGGCAAGCACCTCCA
CTCGTTGGAGCTGTTGCGCCCATGTCTTGGGTCCGCGCTCCCAAGCCAAT
TGGGCACGAGTAGAATAGTCAATGCATTAGGACTTGCAGTAATGACGATG
CTGCGATTCTGTAGCATCTTATAACTCATCATGACAAATTATTGATCACG
AATTAAAAAAAAAAAAAAA
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