CX295433

Overview
NameCX295433
Unique NameCX295433
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_SODGM (S-adenosylmethionine synthetase OS=Sodalis glossinidius (strain morsitans) GN=metK PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 59/112 (52.68%), Postives = 75/112 (66.96%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            F  KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT KIP   +  +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE
Sbjct:  263 FSGKDPSKVDRSAAYAARYVAKNIVAAGLAERCEIQVSYAIGVAEPTSITIETFGTEKIPADNLTALVREFFDLRPHGLITMLDLLQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_SERP5 (S-adenosylmethionine synthetase OS=Serratia proteamaculans (strain 568) GN=metK PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            F  KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP +++  +V+E FD RP  +   +DL +     + +TAAYGHFGR+   F WE
Sbjct:  263 FSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKIPTEQLTLLVREFFDLRPYGLIQMMDLLQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_MYCPA (S-adenosylmethionine synthetase OS=Mycobacterium paratuberculosis GN=metK PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 59/112 (52.68%), Postives = 75/112 (66.96%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            F  KDP+KVDRS AY +R  AK+IVA GLA R  VQV+YAIG   P+ +FV+++GT  +   +I KIV E FD RPG +  +LDL R     + +TAAYGHFGR D +  WE
Sbjct:  283 FSGKDPSKVDRSAAYAMRWVAKNIVAAGLAERVEVQVAYAIGKAAPVGLFVETFGTATVDPVKIEKIVPEVFDLRPGAIIRDLDLLR---PIYAQTAAYGHFGRTDVELPWE 391          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_LISW6 (S-adenosylmethionine synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metK PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 57/112 (50.89%), Postives = 75/112 (66.96%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            F  KDPTKVDRSGAY  R  AK+IVA GLA++  VQ++YAIGV  P+S+ +D+YGT    ++E++  V   FD RP  +   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  277 FSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQLAYAIGVARPVSISIDTYGTSDYSEQELIDGVNALFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_LEGPC (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Corby) GN=metK PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 2
Query:    8 CFLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            CF  KDP+KVDRS AY  R  AK+IVA GLA +C +Q+SYAIGV EP S+FVD++GTG++ + EI+ ++   FD  P  +    DL R     + +TA YGH+GR+  +F WE
Sbjct:  263 CFSGKDPSKVDRSAAYAARHVAKNIVAAGLADKCELQISYAIGVAEPTSIFVDTFGTGRLKNSEIIDLIHTHFDLTPQGIIDQHDLLR---PIYRQTATYGHYGRE--NFPWE 370          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_LEGPA (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Paris) GN=metK PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 2
Query:    8 CFLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            CF  KDP+KVDRS AY  R  AK+IVA GLA +C +Q+SYAIGV EP S+FVD++GTG++ + EI+ ++   FD  P  +    DL R     + +TA YGH+GR+  +F WE
Sbjct:  263 CFSGKDPSKVDRSAAYAARHVAKNIVAAGLADKCELQISYAIGVAEPTSIFVDTFGTGRLKNSEIIDLIHTHFDLTPQGIIDQHDLLR---PIYRQTATYGHYGRE--NFPWE 370          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_HELHP (S-adenosylmethionine synthetase OS=Helicobacter hepaticus GN=metK PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            F  KDP+KVDRS AY  R  AK++VA+G+  + IVQV+YAIGV EP+S+ VD+ GTGK+ D ++ + VK  F   P  +  +LDL R     + KTAAYGHFGR+  +F+WE
Sbjct:  263 FSGKDPSKVDRSAAYAARYVAKNLVASGVCDKAIVQVAYAIGVVEPVSILVDTQGTGKVEDSKLTECVKAVFRLTPKGIIESLDLLR---PIYRKTAAYGHFGRELNEFSWE 371          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_ENT38 (S-adenosylmethionine synthetase OS=Enterobacter sp. (strain 638) GN=metK PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            F  KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  263 FSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKLPTEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_DESDG (S-adenosylmethionine synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=metK PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 55/112 (49.11%), Postives = 78/112 (69.64%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            F  KDP+KVDRSGAY+ R  AK++VA GLA +C VQ++Y IGV +P+SV   S G+  I D+ + + V++ FD RP  ++  LDL+R     + K+A YGHFGR+ P+F+WE
Sbjct:  269 FSGKDPSKVDRSGAYMGRYIAKNVVAAGLAPKCEVQIAYCIGVADPVSVLCTSLGSSDISDEVLTQAVRDVFDLRPYHISKRLDLRR---PIYKKSACYGHFGREIPEFSWE 377          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK1_YEAST (S-adenosylmethionine synthetase 1 OS=Saccharomyces cerevisiae GN=SAM1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 367
            F  KD +KVDRS AY  R  AKS+VA GL +R  VQ SYAIG+ EPLS+ VD+YGT    D+EI+ I+ ++FD RPG++   LDL R     +L TA+YGHF   + ++ WE  K LK+
Sbjct:  269 FSGKDYSKVDRSAAYAARWVAKSLVAAGLCKRVQVQFSYAIGIAEPLSLHVDTYGTATKSDEEIIDIISKNFDLRPGVLVKELDLAR---PIYLPTASYGHF--TNQEYPWEKPKTLKF 382          
The following BLAST results are available for this feature:
BLAST of CX295433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SODGM7.830e-2452.68S-adenosylmethionine synthetase OS=Sodalis glossin... [more]
METK_SERP57.830e-2452.68S-adenosylmethionine synthetase OS=Serratia protea... [more]
METK_MYCPA7.830e-2452.68S-adenosylmethionine synthetase OS=Mycobacterium p... [more]
METK_LISW67.830e-2450.89S-adenosylmethionine synthetase OS=Listeria welshi... [more]
METK_LEGPC7.830e-2449.56S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_LEGPA7.830e-2449.56S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_HELHP7.830e-2450.89S-adenosylmethionine synthetase OS=Helicobacter he... [more]
METK_ENT387.830e-2452.68S-adenosylmethionine synthetase OS=Enterobacter sp... [more]
METK_DESDG7.830e-2449.11S-adenosylmethionine synthetase OS=Desulfovibrio d... [more]
METK1_YEAST7.830e-2450.42S-adenosylmethionine synthetase 1 OS=Saccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionC05072B08SK PhIFruit1 Citrus clementina cDNA clone C05072B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295433 ID=CX295433; Name=CX295433; organism=Citrus clementina; type=EST; length=665bp
GAGGCGGTGCTTTCTCTGGAAAGACCCTACTAAGGTGGATAGGAGTGGTG
CATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCTTGCT
CGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATT
GTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGGAGA
TCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATGACC
ATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGC
TGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAAGTTG
TGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGAAAAG
TGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGATGAAT
AATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATCTCCTG
TGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCTTTTTCTTCTT
TCCCCACTTCTTTTTTGGTTTTGGTTTAATGTACCATGTCACCACTGTTG
TGTAGTGATATCGATTGAGAATTTTGCTCAACTGGTGCCTGGAATTAGTA
AAATTCTTCCTTTTG
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