CX295433

Overview
NameCX295433
Unique NameCX295433
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.114e-57
Identity = 108/124 (87.10%), Postives = 115/124 (92.74%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 382
            F  KDPTKVDRSGAYI RQAAKSIVA GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  274 FSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 4.114e-57
Identity = 108/124 (87.10%), Postives = 115/124 (92.74%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 382
            F  KDPTKVDRSGAYI RQAAKSIVA GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  274 FSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.373e-57
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 373
            F  KDPTKVDRSGAYIVRQAAKSIVA GLARRC+VQVSYAIGVPEPLSVFVDSYGTG IPDK IL+++K++FDFRPGM+TINLDLKRGGNGRF KTAAYGHFGRDDPDFTWE+VKPLK EK
Sbjct:  270 FSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGTIPDKVILELIKKNFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEIVKPLKQEK 390          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.197e-56
Identity = 106/124 (85.48%), Postives = 117/124 (94.35%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 382
            F  KDPTKVDRSGAYI RQAAKSI+A+GLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKE+FDFRPGM+TINLDLK+GGN RF+KTAAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  272 FSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMITINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.563e-56
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 373
            F  KDPTKVDR GAYIVRQAAKSIVA+GLARR IVQ+  AIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGM++INLDL RGGNGRFLKTAAYGHFGR+DPDFTWEVVKPLKWEK
Sbjct:  245 FSGKDPTKVDRRGAYIVRQAAKSIVASGLARRAIVQLLRAIGVPEPLSVFVDTYGTGKIPDREILKIVKETFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 365          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.042e-56
Identity = 116/172 (67.44%), Postives = 122/172 (70.93%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAA------------------------------------------------YGHFGRDDPDFTWEVVKPLKWEKPQA 382
            F  KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKE+FDFRPGM++INLDLKRGGNGRFLKTAA                                                YGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  270 FSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGTGKIPDREILKIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 441          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.666e-56
Identity = 106/124 (85.48%), Postives = 117/124 (94.35%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 382
            F  KDPTKVDRSGAYI RQAAKSI+A+GLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGM++INLDLK+GGN RF+KTAAYGHFGR+D DFTWEVVKPLK++K  A
Sbjct:  272 FSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGREDADFTWEVVKPLKFDKASA 394          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.482e-56
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            F  KDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKESFDFRPGM+ INLDLKRGGN RFLKTAAYGHFGRDDPDFTWE
Sbjct:  270 FSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWE 381          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.482e-56
Identity = 105/124 (84.68%), Postives = 117/124 (94.35%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 382
            F  KDPTKVDRSGAYI RQAAKSI+A+GLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKE+FDFRPGM++INLDLK+GGN RF+KTAAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  272 FSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.728e-55
Identity = 107/124 (86.29%), Postives = 115/124 (92.74%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 382
            F  KDPTKVDRSGAY+ RQAAKSIVA+ LARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPG++TINL LKRGG  R+LKTAAYGHFGRDDPDFTWEVVKPL+ EKP A
Sbjct:  271 FSGKDPTKVDRSGAYVARQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGLITINLGLKRGGY-RYLKTAAYGHFGRDDPDFTWEVVKPLELEKPAA 393          
The following BLAST results are available for this feature:
BLAST of CX295433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_ATRNU4.114e-5787.10S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_ATRNU4.114e-5787.10S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK3_PICSI5.373e-5787.60S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK1_HORVU1.197e-5685.48S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK1_PEA1.563e-5687.60S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK1_DAUCA2.042e-5667.44S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK1_TRIMO2.666e-5685.48S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK_CAMSI3.482e-5694.64S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK3_HORVU3.482e-5684.68S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK_MUSAC1.728e-5586.29S-adenosylmethionine synthetase OS=Musa acuminata ... [more]

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Properties
Property NameValue
Genbank descriptionC05072B08SK PhIFruit1 Citrus clementina cDNA clone C05072B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295433 ID=CX295433; Name=CX295433; organism=Citrus clementina; type=EST; length=665bp
GAGGCGGTGCTTTCTCTGGAAAGACCCTACTAAGGTGGATAGGAGTGGTG
CATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCTTGCT
CGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATT
GTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGGAGA
TCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATGACC
ATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGC
TGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAAGTTG
TGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGAAAAG
TGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGATGAAT
AATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATCTCCTG
TGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCTTTTTCTTCTT
TCCCCACTTCTTTTTTGGTTTTGGTTTAATGTACCATGTCACCACTGTTG
TGTAGTGATATCGATTGAGAATTTTGCTCAACTGGTGCCTGGAATTAGTA
AAATTCTTCCTTTTG
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