CX295433

Overview
NameCX295433
Unique NameCX295433
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.327e-42
Identity = 86/118 (72.88%), Postives = 96/118 (81.36%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD-FTWEVVKPL 361
            F  KDPTKVDRSGAYI RQ AKSIVA GLARR + Q+SYAIGV +PLS+ VD+YG+GKIPD EIL+ VKE FDFR GM+  +LDLKRGGN R+  TAAYGHFGRDD D FTWE V PL
Sbjct:  269 FSGKDPTKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVPL 386          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 9.239e-42
Identity = 83/102 (81.37%), Postives = 92/102 (90.20%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHF 316
            F  KDPTKVDRSGAYIVR+AAKSIVANGLARRC+VQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL IVKE+FDFRPGM++I+LDL RGGNGRF + +    F
Sbjct:  272 FSGKDPTKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          

HSP 2 Score: 23.0978 bits (48), Expect = 9.239e-42
Identity = 6/9 (66.67%), Postives = 7/9 (77.78%), Query Frame = 1
Query:  292 EDCCLWTLW 318
            ED C+WT W
Sbjct:  366 EDSCIWTFW 374          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.747e-34
Identity = 76/118 (64.41%), Postives = 87/118 (73.73%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 364
            F  KD TKVDRSGAY  R  AKS+VA GLA RC+VQVSY+IGV +PLSVFVD+YGTGK  D EIL I+  +FD RPG +  +L L R     F KTA+ GHFGR+DPDFTWE VK LK
Sbjct:  269 FSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTR---PIFQKTASGGHFGRNDPDFTWETVKELK 383          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.637e-31
Identity = 64/112 (57.14%), Postives = 87/112 (77.68%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            F  KDPTKVDRS +Y++R  AK+IVA GLA RC +QV+YAIGV  PLS+ V+++GTGKI D +I++++K++FD RP  +  +LDL+R     + KTAAYGHFGR+D +FTWE
Sbjct:  274 FSGKDPTKVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNFDLRPAAIIRDLDLRR---PIYRKTAAYGHFGREDAEFTWE 382          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_COXBU (S-adenosylmethionine synthetase OS=Coxiella burnetii GN=metK PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.637e-31
Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 2
Query:    8 CFLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            CF  KDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  263 CFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.637e-31
Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 2
Query:    8 CFLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            CF  KDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  263 CFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.637e-31
Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 2
Query:    8 CFLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            CF  KDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  263 CFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.637e-31
Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 2
Query:    8 CFLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            CF  KDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  263 CFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_COXBN (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.282e-30
Identity = 64/113 (56.64%), Postives = 81/113 (71.68%), Query Frame = 2
Query:    8 CFLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            CF  KDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +    +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  263 CFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRTQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CX295433 vs. ExPASy Swiss-Prot
Match: METK_CELJU (S-adenosylmethionine synthetase OS=Cellvibrio japonicus (strain Ueda107) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.282e-30
Identity = 66/112 (58.93%), Postives = 84/112 (75.00%), Query Frame = 2
Query:   11 FLWKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 346
            F  KDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIGV EP S+ ++++GTGK+PD EI+K+V+E FD RP  +   L+LKR     + +TAAYGHFGR+ PDFTWE
Sbjct:  264 FSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTGKLPDAEIIKLVREHFDLRPRGLIEMLNLKR---PIYRQTAAYGHFGRELPDFTWE 372          
The following BLAST results are available for this feature:
BLAST of CX295433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OSTTA8.327e-4272.88S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK2_PEA9.239e-4281.37S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_DICDI3.747e-3464.41S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_SYNWW8.637e-3157.14S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_COXBU8.637e-3157.52S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXBR8.637e-3157.52S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB28.637e-3157.52S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB18.637e-3157.52S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXBN3.282e-3056.64S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_CELJU3.282e-3058.93S-adenosylmethionine synthetase OS=Cellvibrio japo... [more]

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Properties
Property NameValue
Genbank descriptionC05072B08SK PhIFruit1 Citrus clementina cDNA clone C05072B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295433 ID=CX295433; Name=CX295433; organism=Citrus clementina; type=EST; length=665bp
GAGGCGGTGCTTTCTCTGGAAAGACCCTACTAAGGTGGATAGGAGTGGTG
CATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCTTGCT
CGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATT
GTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGGAGA
TCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATGACC
ATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGC
TGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAAGTTG
TGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGAAAAG
TGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGATGAAT
AATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATCTCCTG
TGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCTTTTTCTTCTT
TCCCCACTTCTTTTTTGGTTTTGGTTTAATGTACCATGTCACCACTGTTG
TGTAGTGATATCGATTGAGAATTTTGCTCAACTGGTGCCTGGAATTAGTA
AAATTCTTCCTTTTG
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