CX295435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295435 vs. ExPASy Swiss-Prot
Match: RLA0_LEIIN (60S acidic ribosomal protein P0 OS=Leishmania infantum GN=LIPO-A PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.383e-16 Identity = 49/143 (34.27%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 214 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIP-------LLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNI 621 K Y+ +L L +Y+ +L DNV S Q+ ++ R LR + +MGK T+ + + A+ + LL GN GLIFT + ARVG ++P DV+V G+TG++P+QTSFFQ LNI Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRAQAKDASPEAKHFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDAHRVKRAARVGAISPCDVIVAAGSTGMEPTQTSFFQALNI 150
BLAST of CX295435 vs. ExPASy Swiss-Prot
Match: RLA0_HALSA (Acidic ribosomal protein P0 homolog OS=Halobacterium salinarium GN=rplP0 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 1 Query: 229 AKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDP 588 A+L LLE Y + V + S QLQ++RRGL G + + M +NT++ R + E+ G+ L ++G VGL+ T + AP G VAP D+VVP G+TG+DP Sbjct: 21 AELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAGD-GLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDP 135
BLAST of CX295435 vs. ExPASy Swiss-Prot
Match: RLA0_HALS3 (Acidic ribosomal protein P0 homolog OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 1 Query: 229 AKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDP 588 A+L LLE Y + V + S QLQ++RRGL G + + M +NT++ R + E+ G+ L ++G VGL+ T + AP G VAP D+VVP G+TG+DP Sbjct: 21 AELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAGD-GLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDP 135
BLAST of CX295435 vs. ExPASy Swiss-Prot
Match: RLA0_ENCCU (60S acidic ribosomal protein P0 OS=Encephalitozoon cuniculi GN=RPP0 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12 Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = 1 Query: 184 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNI 621 M K +K K++ Y+ + +L E Y++ + +NV S QL++I+R G++ +LMGKN+ ++R I G + L++G+V +F KG+ A A+VG VA DV V TG+ P +TS+FQ L I Sbjct: 25 MTRKDAKERKELTYE-RARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSAIRRAI----ADLGKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGI 165
BLAST of CX295435 vs. ExPASy Swiss-Prot
Match: RLA0_NATPD (Acidic ribosomal protein P0 homolog OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rplP0 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.141e-11 Identity = 39/119 (32.77%), Postives = 60/119 (50.42%), Query Frame = 1 Query: 232 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDP 588 +L LE Y + V + S QLQ++RR L G + + + +NT+M+R + + G L+ ++G VGLI T + AP G VAP D+V+P G+TG+DP Sbjct: 21 ELVAFLERYESVGVVDITGIPSRQLQDMRRDLHGTAALRVSRNTLMERALNEGGDGLG-----ELVEHVEGQVGLIGTNDNPFGLYQQLEESKTPAPINAGEVAPNDIVIPEGDTGVDP 134 The following BLAST results are available for this feature:
BLAST of CX295435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295435 ID=CX295435; Name=CX295435; organism=Citrus clementina; type=EST; length=622bpback to top |