CX295437

Overview
NameCX295437
Unique NameCX295437
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_NEIMA (Phosphoenolpyruvate carboxylase OS=Neisseria meningitidis serogroup A GN=ppc PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.050e-11
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 3
Query:    3 G*AKEGALTTEKFVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            G  KE    + K +L +   E+L  +NRSL R +  R+PYLN +N LQV +LKRLR++ DN      + +TING+A G+RNTG
Sbjct:  818 GMIKEEYRRSRKALLDLLQTEELLRDNRSLARSLALRIPYLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG 900          
BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_NEIG1 (Phosphoenolpyruvate carboxylase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=ppc PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.050e-11
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 3
Query:    3 G*AKEGALTTEKFVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            G  KE    + K +L +   E+L  +NRSL R +  R+PYLN +N LQV +LKRLR++ DN      + +TING+A G+RNTG
Sbjct:  818 GMIKEEYRRSRKALLDLLQTEELLRDNRSLARSLALRIPYLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG 900          
BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_RHOPS (Phosphoenolpyruvate carboxylase OS=Rhodopseudomonas palustris (strain BisB5) GN=ppc PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 30/70 (42.86%), Postives = 48/70 (68.57%), Query Frame = 3
Query:   42 VLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            +L + GHE+L + N  L R I  R PYL+P+N +QV++L+  R  D + ++   + +TINGI+AG+RN+G
Sbjct:  864 LLAIMGHERLLQGNPLLERSIRHRFPYLDPLNHVQVQLLREHRTHDPDEQVLRGIQLTINGISAGLRNSG 933          
BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_RHOP2 (Phosphoenolpyruvate carboxylase OS=Rhodopseudomonas palustris (strain HaA2) GN=ppc PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 30/70 (42.86%), Postives = 48/70 (68.57%), Query Frame = 3
Query:   42 VLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            +L + GH+KL + N  L R I  R PYL+P+N +QV++L+  R  D + ++   + +TINGI+AG+RN+G
Sbjct:  864 LLAIMGHDKLLQGNPLLDRSIRHRFPYLDPLNHVQVQLLREHRTHDPDEQILRGIQLTINGISAGLRNSG 933          
BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_MYCLE (Phosphoenolpyruvate carboxylase OS=Mycobacterium leprae GN=ppc PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 28/68 (41.18%), Postives = 49/68 (72.06%), Query Frame = 3
Query:   48 VVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            +++GH+ L  +N +L R + +R PYL P+N LQVE+L+R R   D+  ++  +L+T+NG+A+ +RN+G
Sbjct:  867 LITGHDDLLADNPALARSVFNRFPYLEPLNHLQVELLRRYRSGHDDEMVQRGILLTMNGLASALRNSG 934          
BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_STRPG (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=ppc PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 3
Query:   30 TEKFVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            T+  +L +  H+ L E+N SL+  ++SRLPY N +N +Q+E++KR R +  +      +  TINGIA G+RN+G
Sbjct:  847 TKNVILAIQDHDDLLEDNPSLKHSLKSRLPYFNVLNYIQIELIKRWRNNQLDENDEKLIHTTINGIATGLRNSG 920          
BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_STRP8 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M18 GN=ppc PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 3
Query:   30 TEKFVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            T+  +L +  H+ L E+N SL+  ++SRLPY N +N +Q+E++KR R +  +      +  TINGIA G+RN+G
Sbjct:  847 TKNVILAIQDHDDLLEDNPSLKHSLKSRLPYFNVLNYIQIELIKRWRNNQLDENDEKLIHTTINGIATGLRNSG 920          
BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_STRP6 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M6 GN=ppc PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 3
Query:   30 TEKFVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            T+  +L +  H+ L E+N SL+  ++SRLPY N +N +Q+E++KR R +  +      +  TINGIA G+RN+G
Sbjct:  847 TKNVILAIQDHDDLLEDNPSLKHSLKSRLPYFNVLNYIQIELIKRWRNNQLDENDEKLIHTTINGIATGLRNSG 920          
BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_STRP3 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M3 GN=ppc PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 3
Query:   30 TEKFVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            T+  +L +  H+ L E+N SL+  ++SRLPY N +N +Q+E++KR R +  +      +  TINGIA G+RN+G
Sbjct:  847 TKNVILAIQDHDDLLEDNPSLKHSLKSRLPYFNVLNYIQIELIKRWRNNQLDENDEKLIHTTINGIATGLRNSG 920          
BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_STRP1 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M1 GN=ppc PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 3
Query:   30 TEKFVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            T+  +L +  H+ L E+N SL+  ++SRLPY N +N +Q+E++KR R +  +      +  TINGIA G+RN+G
Sbjct:  847 TKNVILAIQDHDDLLEDNPSLKHSLKSRLPYFNVLNYIQIELIKRWRNNQLDENDEKLIHTTINGIATGLRNSG 920          
The following BLAST results are available for this feature:
BLAST of CX295437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CAPP_NEIMA3.050e-1145.78Phosphoenolpyruvate carboxylase OS=Neisseria menin... [more]
CAPP_NEIG13.050e-1145.78Phosphoenolpyruvate carboxylase OS=Neisseria gonor... [more]
CAPP_RHOPS5.203e-1142.86Phosphoenolpyruvate carboxylase OS=Rhodopseudomona... [more]
CAPP_RHOP26.795e-1142.86Phosphoenolpyruvate carboxylase OS=Rhodopseudomona... [more]
CAPP_MYCLE6.795e-1141.18Phosphoenolpyruvate carboxylase OS=Mycobacterium l... [more]
CAPP_STRPG8.875e-1140.54Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP88.875e-1140.54Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP68.875e-1140.54Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP38.875e-1140.54Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRP18.875e-1140.54Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC05072B12SK PhIFruit1 Citrus clementina cDNA clone C05072B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295437 ID=CX295437; Name=CX295437; organism=Citrus clementina; type=EST; length=551bp
GAGGCTGAGCTAAGGAGGGAGCTCTTACAACTGAGAAGTTCGTACTTGTG
GTTAGTGGGCATGAGAAGCTATCTGAGAATAACCGCAGTTTGAGGAGGCT
GATTGAGAGCAGACTCCCATATCTCAATCCTATGAATATGTTGCAGGTGG
AGATACTGAAGAGATTGAGACAGGATGATGATAACCATAAACTCAGAGAT
GCATTGCTCATCACTATAAATGGAATAGCTGCTGGTATGAGGAACACAGG
TTAAGTCAATTCGCTAGCTGGTTTAACACAGGTTAAGTTTAAGTGGCTTG
TATGCATATCGGGAAGACAGGTTTAGTAAAATCTCGCTTGTCATCTGCTA
ATGTATGCCGGAAACTACTCCTATTTCTATTTTTGTAATTTTCTTTTTAG
AACTGCGGCTTGATGGTTGAGGTCACAACTAAATGTACTTGACAAAGGCT
GTGTGGAAAAATTTGTGGAAAATTTTCAGTTAGTAGTAAAAAAAAAAAAA
AGAAAAAAAAATTAAGAAAAAAAAAACAAATAAAAAATAAAAAAAAAAAA
A
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